Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2858 ATGCCAGGACCCAACTCAAGGAAACCCCACATTAGGCCCACTCAATCATGTCTGAAGGCTGGACCTTTTAAAAGAGCTCTTCAAAATCAAAGAAATCACCATATAGTTATAGATTCCATTGAAGCCGTCCCAGAAAGTGAGTGCTTTAAAGCTCAAGCTCACTTGTACAGCTACATTTTTAGCCACATTAATGGCATAGTTCTCAAGTGTTTTGTTCAGCTAGATATCCCAGACATAATCTACAAGCATGGCCAACCCATCACTATTCCTCAATTGATCTCCAAACTAGAAATTCAACCAACCAAAACTGCCTTTGTAGAGAGGCTTGTTCGCTTCTTGGTGCACAATGGCTTCTTACCAAAAACCAAAGTGCACGAGCAAGATGAAGAAATGGAGGTATACACTCTCATTTCTTCTAAACTACTCATCAAATGCATGGAACCAAACCTGGCACCAATGGTGTTATCGTTTGTCGACCCTAGTTTCTTAGATCCGTTTGATTTTTTGGGAAGCTGGTTCAAACAGAGGGAGACGGTAACTGAGATTGCCCTTGGGGCAACCATTTGGGAAATTTTTGAAAGAGATTCTCAAAGATTGAAGTCTCCCAATGAAGCCATGGCGAGTGATTCACGAATGATTAGTGTCATACTTAAAGACTCTAAATCGATCTTTCAAGGATTGGAATCCATAGTTGATGTTGGAGGCGGCACAGGCACCACATGCAAAATCATCTCTGAAGCATATCCTCATCTGAAATGCATAGTTTTTGATCGTCCACATGTTGTGGAAAATTGTTCAGGAAGCAATAACTTGAGTTATTTTGGTGGCGACATGTTTGAATACATACCTTCTGCCGATGCTGTACTATTGAAGGCAAGTTAA 882 0.4116 MPGPNSRKPHIRPTQSCLKAGPFKRALQNQRNHHIVIDSIEAVPESECFKAQAHLYSYIFSHINGIVLKCFVQLDIPDIIYKHGQPITIPQLISKLEIQPTKTAFVERLVRFLVHNGFLPKTKVHEQDEEMEVYTLISSKLLIKCMEPNLAPMVLSFVDPSFLDPFDFLGSWFKQRETVTEIALGATIWEIFERDSQRLKSPNEAMASDSRMISVILKDSKSIFQGLESIVDVGGGTGTTCKIISEAYPHLKCIVFDRPHVVENCSGSNNLSYFGGDMFEYIPSADAVLLKAS 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2858 293 SUPERFAMILY "Winged helix" DNA-binding domain 46 136 IPR036390 -
Prci11g2858 293 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 147 291 IPR029063 -
Prci11g2858 293 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 56 293 IPR016461 GO:0008168
Prci11g2858 293 Pfam Dimerisation domain 67 114 IPR012967 GO:0046983
Prci11g2858 293 Pfam O-methyltransferase domain 172 291 IPR001077 GO:0008171
Prci11g2858 293 Gene3D Vaccinia Virus protein VP39 144 293 IPR029063 -
Prci11g2858 293 Gene3D - 38 142 IPR036388 -
Prci11g2858 293 PANTHER O-METHYLTRANSFERASE 50 291 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2858 Prci-Chr11 45006373 45009979 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2858 66 291 Monolignol Biosynthesis Gene Families AT5G54160 29.237 5.54e-24 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2858 K22588 K13262 qsu:111988269 265.774