LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci11g2857	ATGGCTGCAGGGGTTGTGGGTGGAGCATTTCTCTCTGCTTCTCTTCAAGTCGTTTTTGATAGGCTGGGCCCTACTTCTAATATATACAACTGCTTCCGATCCAGAAAGCTCGAGGATCGATTGCTTAAAAAGCTCCACGTCACCCTCATCTCTGTCAATCAAGCGCTTGATGATGCAGAAACAAAGCAGTACACAAACTCTAATGTCAAGAAGTGGCTTTATGAGCTCAAACATGCTGTTTTTGACGCTGATGACCTCTTAGATGAGATTGCTACTGAGGCGACCACGTTGAAGATCGAAGCTGAGAATCAAGGTGCTACCAATAAGGTACGTCGCTTCACTTCTTTTGTTAGTCAATTTTACAAACACATGGTAGATAGAATCCAGGAAGTGCTTGACGTCATGGAGTTCTTTGCAAAGCAAAAGGACGTTTTGGGATTGAAGGAAGGCTCTGGGGGTGGTACCGAAGTTGAAGTTTGTGGGAAAGTATCCTCTAGATTGCCAACTACATCTCTGGTGGCTGATGAGTCCCGCATATATGGCAGAGATGGTGATAAAGAAGAAATAATTCGTCTTTTACTCCAGGAAGATCTGAGCAGGGACCCACTATTTGTGATTTCTGTAGTGGGCATGGGTGGGTCGGGAAAAACCACTCTTGCTCAACTGGTGTACAATGATGGGAGGATGAAGGATCAATTTCAACTCAAAGTTTGGGTGTGTATTTCAGAAGAATTTTATGTTCTTGGAATTACAAAAACAATACTTTCTGCACTGGAATGTTCAATAACAGGATGTGAAGATCTAAATCAGCTTCAATTGAAACTGAAAGAGGAATTGACGGGGAAGAAATTTTTTCTAGTTCTTGATGATATCTGGAATGAGCACAGATCTAATTGGGAATTGTTACAAGTTCCTTTTTGTTTTGGGGCTTCTGGAAGTAAGATCCTTGTTACTACACGTAGTGAAAAGGTAGCATTGGTCATGGCCTCTGTTAGAGTGCATCACATAGCTTTATTAAATGAAGAAGATGGATGGAAGTTATTTGTGGAACATGTGTTCAAAAACAAGGATGCTAGCTTGCGTTCAGATCTAGAGTCAATTGGCAAAAAAATTGTTCAAAAGTGCAAAGGGTTGCCTCTAGCCATAAAATCATTGGGTGATCTCTTGCATACAAAGTTATCGCAGAAATATTGGAATGAAATTCTTGGCAGTGAGATATGGCAATTACCAGATGATGAGACCAATATAATGCCAGCTCTAAGACTAAGCTATCATTATCTTCCTTCTAATTTGAAGAGGTGTTTTGCATTTTGTTCTATATTTCCTAAAAACTTTGAAACTGACAAGGAGTCTCTGATCCAAATGTGGATGGCAGAGGATTTGATACATAGCAATCAAGGAAATAAAATTGTGGAGGAAATGGGGGATGGAATTTTGGATGAACTAGAATCAAGGTCATTTGTTGAGAAATCAAGAAGAAATGATGACAAATTAATCATGTATGACCTCGTAAATGATTTGGCAAAATCAATCTTCGAAGGATTTTGTTTGAGGATGGAGTGTGATAAGGTGCAAAATAATATTAATGAAAAGATACGCTATTGTTCAAACTCAAGTTTAGCCTGGGGCCACGAAATATCATTGGAACCTATTTATGAGTGTGAGCAGTTACGGTGTTTTGCTCAACTACCACAAGTGGAATTGCCCATTGGTATTGTTGAAATGTTTTCAAGATTTAAGCACTTGCGAATTTCGGGCTTAAAGTGTGTTGAAATTAAATTAAGTGATGGTATATGCAATTTAAAGCACCTTCATTATTTAGGCCTCTCTCATAATAGGATTGAAAAGTTACCGAATTCAATTTGCACTATGTATAATTTGCAAACTTTGAAATTGTACTATTGCAGTCAGATTGTTGAGTTACCTCAGGATTTGTACAAATTGATCAATTTGCATTATTTAGACCTTTCTTGTACTGGGATTAGAAAGTTACCTGATTCAATTTGTAAGGTGCATAGTTTGTAA	2025	0.3837	MAAGVVGGAFLSASLQVVFDRLGPTSNIYNCFRSRKLEDRLLKKLHVTLISVNQALDDAETKQYTNSNVKKWLYELKHAVFDADDLLDEIATEATTLKIEAENQGATNKVRRFTSFVSQFYKHMVDRIQEVLDVMEFFAKQKDVLGLKEGSGGGTEVEVCGKVSSRLPTTSLVADESRIYGRDGDKEEIIRLLLQEDLSRDPLFVISVVGMGGSGKTTLAQLVYNDGRMKDQFQLKVWVCISEEFYVLGITKTILSALECSITGCEDLNQLQLKLKEELTGKKFFLVLDDIWNEHRSNWELLQVPFCFGASGSKILVTTRSEKVALVMASVRVHHIALLNEEDGWKLFVEHVFKNKDASLRSDLESIGKKIVQKCKGLPLAIKSLGDLLHTKLSQKYWNEILGSEIWQLPDDETNIMPALRLSYHYLPSNLKRCFAFCSIFPKNFETDKESLIQMWMAEDLIHSNQGNKIVEEMGDGILDELESRSFVEKSRRNDDKLIMYDLVNDLAKSIFEGFCLRMECDKVQNNINEKIRYCSNSSLAWGHEISLEPIYECEQLRCFAQLPQVELPIGIVEMFSRFKHLRISGLKCVEIKLSDGICNLKHLHYLGLSHNRIEKLPNSICTMYNLQTLKLYYCSQIVELPQDLYKLINLHYLDLSCTGIRKLPDSICKVHSL	674

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci11g2857	674	Gene3D	-	30	129	-	-
	Prci11g2857	674	SMART	LRR_typ_2	601	624	IPR003591	-
	Prci11g2857	674	SMART	LRR_typ_2	648	671	IPR003591	-
	Prci11g2857	674	Pfam	Rx N-terminal domain	10	104	IPR041118	-
	Prci11g2857	674	Pfam	NB-ARC domain	185	424	IPR002182	GO:0043531
	Prci11g2857	674	SUPERFAMILY	L domain-like	500	674	-	-
	Prci11g2857	674	Gene3D	Ribonuclease Inhibitor	553	674	IPR032675	-
	Prci11g2857	674	PANTHER	DISEASE RESISTANCE PROTEIN RP	56	658	IPR044974	GO:0006952
	Prci11g2857	674	PRINTS	Disease resistance protein signature	278	292	-	-
	Prci11g2857	674	PRINTS	Disease resistance protein signature	375	389	-	-
	Prci11g2857	674	PRINTS	Disease resistance protein signature	205	220	-	-
	Prci11g2857	674	PRINTS	Disease resistance protein signature	622	638	-	-
	Prci11g2857	674	FunFam	Probable disease resistance protein At1g61300	163	332	-	-
	Prci11g2857	674	Gene3D	-	162	333	IPR027417	-
	Prci11g2857	674	Gene3D	-	423	510	IPR036388	-
	Prci11g2857	674	Gene3D	-	338	422	IPR042197	-
	Prci11g2857	674	ProSiteProfiles	Leucine-rich repeat profile.	603	624	IPR001611	GO:0005515
	Prci11g2857	674	FunFam	Probable disease resistance protein At1g63360	424	510	-	-
	Prci11g2857	674	SUPERFAMILY	P-loop containing nucleoside triphosphate hydrolases	166	438	IPR027417	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci11g2857	Prci-Chr11	44941140	44943361	Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci11g2857	192	665	WRKY Transcription Factor Family	AT5G45050	21.359	2.75e-06	48.9

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci11g2857	-		-	pcin:129286566	1288.09