Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2856 CATAGGACGAAGAGCTCATCAAAACAAAAAAAGTCACCCTACAGTTATGTGTTCGTTGAAGCCATCCCAGCAAGTGATGAGTACTTTGAAGCTCAAGCTCACTTGTACAAACACATTTTAAGCTACATTAATGCCGCAGTTCTCAGGTGTGCTGTTCAGCTAAGAATTCCAGACATAATCCACAACCATGGCCAACCCATTACTATTCCTCAATTAGCCTCCAATCTTGAACTTCACCCGACAAAATTTGCCTCTCTAGAGAAGCTTGCTCGCCTACTGGTGCACAATGGCTTCTTAGCAGCAGAAAAAAGAGTGAACGAGGAAGATGAAGAAATGGAGGCATACACTCTCACTCCATCTTCTAAACTACTCGTTAAAGGCATGGAACCAAACCTAGCACCAATGGTGTTATGGTTTGCTGATGCTGGTCTCATGGCTGACTTTGATTTTTCAGGAAGTTGGTTCAAAGGTGAGGCAAATATAATGGCTAAGAGTGCCTTTGGGGGTGGTGTTTGGGATGTATTTGAACGTGAGTCTCAAAAATTTAAGTGTTTCAATGAAGCCATGGTGAGTGATTCACAAATGATTAGCGTGGTGTTGAGAGACTCTAAGTCAATCTTCCAAGGATTAGAATCCATAGTTGATGTTGGAGGTGGCACAGGCACTACATGCAGAATCATTTCCGAAGCATGCCCAAATCTAAAATGCTTAGTGTTTGATCTTCCACACGTTGTGGAAAACTGTTTAGGAAGCAATAACTTTAGTTATGTTGGTGGTAGCATGTTTGAATCCATCCCTTCCGCCGATGCTGTTCTTCTAAAGTGGGTATTACATGATTGGGATGATGAAGATTCTTTGAAGATCCTGAACAAATGTAAGGAGGCAATCACAAAGAAAGGCAAAGGAGGAAAGGTGATAATCATTGAGGCAGTTATAAAGGAGAAGGAAGATGACAATGACATGAGACATGTGAAACTCTTATTCGACGTTATGAAGATGGGTTGCCTCAATGGGAAAGAAAGAACTGAACAAGAATGGAAGAAGCTTCTAGAAGCTGCAGGCTTCAAACATTACAAGATTACACCTCGGTTTGGTTTTAGGTCAATCATTAAAGCCTATCCATAA 1125 0.4133 HRTKSSSKQKKSPYSYVFVEAIPASDEYFEAQAHLYKHILSYINAAVLRCAVQLRIPDIIHNHGQPITIPQLASNLELHPTKFASLEKLARLLVHNGFLAAEKRVNEEDEEMEAYTLTPSSKLLVKGMEPNLAPMVLWFADAGLMADFDFSGSWFKGEANIMAKSAFGGGVWDVFERESQKFKCFNEAMVSDSQMISVVLRDSKSIFQGLESIVDVGGGTGTTCRIISEACPNLKCLVFDLPHVVENCLGSNNFSYVGGSMFESIPSADAVLLKWVLHDWDDEDSLKILNKCKEAITKKGKGGKVIIIEAVIKEKEDDNDMRHVKLLFDVMKMGCLNGKERTEQEWKKLLEAAGFKHYKITPRFGFRSIIKAYP 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2856 374 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 36 374 IPR016461 GO:0008168
Prci11g2856 374 Pfam O-methyltransferase domain 158 356 IPR001077 GO:0008171
Prci11g2856 374 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 129 371 IPR029063 -
Prci11g2856 374 SUPERFAMILY "Winged helix" DNA-binding domain 25 127 IPR036390 -
Prci11g2856 374 FunFam Coniferyl alcohol 9-O-methyltransferase 19 124 - -
Prci11g2856 374 Gene3D Vaccinia Virus protein VP39 126 374 IPR029063 -
Prci11g2856 374 Pfam Dimerisation domain 47 94 IPR012967 GO:0046983
Prci11g2856 374 PANTHER O-METHYLTRANSFERASE 30 359 IPR016461 GO:0008168
Prci11g2856 374 PIRSF O-mtase 19 374 IPR016461 GO:0008168
Prci11g2856 374 Gene3D - 21 124 IPR036388 -
Prci11g2856 374 FunFam O-methyltransferase ZRP4 126 374 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2856 Prci-Chr11 44861906 44866088 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2856 48 360 Monolignol Biosynthesis Gene Families AT5G54160 32.399 3.50e-46 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2856 K22588 K13262 qsu:111988269 370.548