Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2854 ATGTGTTCCGTTGAAGCCAACCCAGCAAGTGATGAGTACTTTGAAGCTCAAGCTCACTTGTACAAACACATTTTAAGCTACATTAATACCACAATTCTCAAGTGTGCTGTTCAGCTAAGAATTCCAGATATCATCCACAACCATGGCCAACCCATTACTTTTCCTCAATTCGCCTCCACTCTTGAACTTCACCCAACAAAATCTGCCTCTCTAGAGAGGCTTGCTCGCTTACTGGTGCACAATGGCTTCTTAGCAGCAGAAACGAAAGTGAACGAGGAAGATGAAGAAATGGAGGCATACACTCTCACTCCTTGTTCTAAACTGCTCGTCAAAGGCATGGAACCAAACCTTGCATCAATGGTGTTATGGTTTGCTGACACTGGTTGCATGGCTGCGTTTGATTTGCTGGGAAGCTGGTTCAAAGGGGAGGTGAATATCATTGCTACAGAGGGAAGCGTTTGGGATGTACTTGATCACGATCCTCAAAAATTGAAGTCTTTCAATAAAGCTATGGCAAGTGATTCACAGATGATTAATGTAGGACTTAGAGACTCTAAGTCAATCTTCCAAGGATTGAAATCTATAGTTGATGTTGGAGACAGCCCAAGCACCACATGTAGAATCATCGCCAAAGCATACCCTAATTTGAAATGCATAGTGTTTGATCATCCACATGTTGTGGCATATTGTTCAGCAAGCAAAAACTTGAGTTATGTTGGTGGCAACATGTTTGAATCCATCCCTTCTGCGGATGCAGTTCTCATGAAGTGGATTTTACATAATTGGGATGATGAAGATTCTTTGAAGGTACTGAAAAAATGTAAGGAGGCAATCGCAAAGAAAGGCAAAGAAGGAAAGGTGATAATAATTGATGCAGTGATAAAGGAGAAGGAAAATGATAATGACATGACAGAAGTGAAACTCTTGTTTGACGTTCTGATGATGAGTTTGCTCAATGGGAAAGAAAGAACTGAGAAAGAATGGAAGAAGCTTCTAGAAGCTGCAGGCTTCAAACATTACAAGATTACTCCTTGTTTTGGTTTTAGGTCAATCATTGAAGCTTATCCTTAA 1071 0.4071 MCSVEANPASDEYFEAQAHLYKHILSYINTTILKCAVQLRIPDIIHNHGQPITFPQFASTLELHPTKSASLERLARLLVHNGFLAAETKVNEEDEEMEAYTLTPCSKLLVKGMEPNLASMVLWFADTGCMAAFDLLGSWFKGEVNIIATEGSVWDVLDHDPQKLKSFNKAMASDSQMINVGLRDSKSIFQGLKSIVDVGDSPSTTCRIIAKAYPNLKCIVFDHPHVVAYCSASKNLSYVGGNMFESIPSADAVLMKWILHNWDDEDSLKVLKKCKEAIAKKGKEGKVIIIDAVIKEKENDNDMTEVKLLFDVLMMSLLNGKERTEKEWKKLLEAAGFKHYKITPCFGFRSIIEAYP 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2854 356 Gene3D - 2 109 IPR036388 -
Prci11g2854 356 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 21 356 IPR016461 GO:0008168
Prci11g2854 356 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 355 IPR029063 -
Prci11g2854 356 FunFam O-methyltransferase ZRP4 111 356 - -
Prci11g2854 356 PANTHER O-METHYLTRANSFERASE 15 341 IPR016461 GO:0008168
Prci11g2854 356 Pfam O-methyltransferase domain 152 338 IPR001077 GO:0008171
Prci11g2854 356 Gene3D Vaccinia Virus protein VP39 111 356 IPR029063 -
Prci11g2854 356 FunFam Coniferyl alcohol 9-O-methyltransferase 3 109 - -
Prci11g2854 356 Pfam Dimerisation domain 32 79 IPR012967 GO:0046983
Prci11g2854 356 PIRSF O-mtase 2 356 IPR016461 GO:0008168
Prci11g2854 356 SUPERFAMILY "Winged helix" DNA-binding domain 10 112 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2854 Prci-Chr11 44700391 44701823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2854 33 348 Monolignol Biosynthesis Gene Families AT5G54160 33.022 4.33e-47 162
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2854 K22588 K13262 qsu:111988269 353.599