Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci11g2852 | ATGCGGAGGCGACCCTCCGCGGCCAGCTTCTTAGAGGGACTATGGCCGTTCAGGCTAAGGAAGTTTGAGGCAATAACAGTTGGAAGCAAAAGCGCCACTCTAGAGCCTCTGGAATTCAATTTGGCAACCATTGAAGCTGCAAAAAATAAGTTTTCACACGAAAACAAGTTAGGACATGGTGGATTTGGAGAAGTTTACAAGGGTATTCTTCCAAATGACAAAGAAGTAGCTGTAAAGAAACTTTCAAAAGATTCTAGCCAAGGTACAAAAGAATTTAAGAATGAGGTTCTATTAATAGCCAGACTTCAGCACAAAAATTTGGTGGCGTTGTTAGGATTCTGCATAGAAGAGCAGGAGAAAATGCTTATATATGAATACGTTCCCAATAAAAGCCTTGATTACTTTCTATTTGGTTCTCCTAGAAGCAAAGTATTAAATTGGTTGGAGCGCTATAAAATCATAGGAGGAGTTACTTGAGGGATTCTCTATCCTCATGAATATTCTTGCTTTAAAATTATACATTGTGATCTCAAACCTAGCAATATTTTGCTAGATAATGAAATGAATGCAAAAATTTCAGACTTTAACTTGGCTAGAATGGTTGCTATCAATGAAAATGAGGAAACTATAAGTAAAATTGTTGGAACATATGGTTATATGTCTCCGGAATATGTAATGTTTGGACAATTCTCTGAAAAATCAAATGTTTTTAGTTTTGGAGTTGTAGTTTTAGAAATCATCAGTGGAAAGAAAAATACAAGTTGTCATGATCAATCACAATATGCGGACGGCCTCTTAAGCTATGCTTGGAATCAATGGAGAGGTGAAAAATTGTTGGGGATATTTGATTCAAATCTAAAAGAATTTGGATCATATGATGAAGTGATAAAGTGCATTCAGATTGGTTTGTTATGTGTTCAAGCAAATCCAGATATTAGGCCTTCCATGGCTATACTTGTTCATTATCTTAGCAATGATTCAATTCAATTGCCACTTCCACAGGAACCTGCATTCGTTCAGCATGGTCCGATGGAGCTTACTGTTGGAAGTAATGAAACATATTGCTCAATGATGCATCTATAA | 1083 | 0.3638 | MRRRPSAASFLEGLWPFRLRKFEAITVGSKSATLEPLEFNLATIEAAKNKFSHENKLGHGGFGEVYKGILPNDKEVAVKKLSKDSSQGTKEFKNEVLLIARLQHKNLVALLGFCIEEQEKMLIYEYVPNKSLDYFLFGSPRSKVLNWLERYKIIGGVTXGILYPHEYSCFKIIHCDLKPSNILLDNEMNAKISDFNLARMVAINENEETISKIVGTYGYMSPEYVMFGQFSEKSNVFSFGVVVLEIISGKKNTSCHDQSQYADGLLSYAWNQWRGEKLLGIFDSNLKEFGSYDEVIKCIQIGLLCVQANPDIRPSMAILVHYLSNDSIQLPLPQEPAFVQHGPMELTVGSNETYCSMMHL | 360 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci11g2852 | 360 | FunFam | Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 | 20 | 126 | - | - | |
Prci11g2852 | 360 | SUPERFAMILY | Protein kinase-like (PK-like) | 35 | 344 | IPR011009 | - | |
Prci11g2852 | 360 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 172 | 184 | IPR008271 | GO:0004672|GO:0006468 | |
Prci11g2852 | 360 | FunFam | G-type lectin S-receptor-like serine/threonine-protein kinase | 127 | 331 | - | - | |
Prci11g2852 | 360 | ProSitePatterns | Protein kinases ATP-binding region signature. | 57 | 80 | IPR017441 | GO:0005524 | |
Prci11g2852 | 360 | SMART | serkin_6 | 51 | 323 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci11g2852 | 360 | Pfam | Protein kinase domain | 52 | 317 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci11g2852 | 360 | ProSiteProfiles | Protein kinase domain profile. | 51 | 338 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci11g2852 | 360 | CDD | STKc_IRAK | 57 | 323 | - | - | |
Prci11g2852 | 360 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 31 | 346 | - | - | |
Prci11g2852 | 360 | Gene3D | Transferase(Phosphotransferase) domain 1 | 127 | 330 | - | - | |
Prci11g2852 | 360 | Gene3D | Phosphorylase Kinase; domain 1 | 18 | 126 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci11g2852 | Prci-Chr11 | 44583458 | 44598393 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci11g2852 | 35 | 338 | Receptor kinase-like Gene Family | AT4G11480 | 53.947 | 3.44e-119 | 357 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Prci11g2852 | Pkinase | 2.1e-44 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci11g2852 | - | - | pcin:129286093 | 491.115 |