Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2847 ATGACGTGGTGCAACGAGTCATCAGACGAAGAGGAGCATAATAATAATAATAATAACAGCAGCAATAAGGCGATTCAGATGGTTAATTCGGCCTCCATTGTTACTCCTCCTCAAGCTTCTGTCGTACATGATCAAACCCTCACAACAAAGAGAGCCTCCGAAATTCGAACCATTACTTGCCCTTCATGTGGTCATAACATTCAGCTCCAAGACCAGGGTGGGATTCATGAGCTTCCAGGGCTACCAGCAGGAGTGAAGTTTGATCCAAATGATCAGGAAATATTGGAGCATTTAGAGGCAAAGGCTCTGTCTGATGTGCGTAAGATTCATCCTCTCATAGATGAGTTCATTCCAACGCTTGAAGGCGAGAATGGAATCTGTTATACTCACCCAGAAAAGCTTCCTGGTGTAAGCAAAGATGGACAGATCCGGCATTTCTTTCACAGGCCATCAAAAGCATACACAACAGGAACAAGAAAGCGAAGAAAGGTCCACACAGACGAAGATGGAAGCGAGACAAGATGGCACAAAACAGGCAAAACAAGACCAGTCCTATGGAATGGTTCTGTCAAAGGTTTCAAGAAGATCCTCGTCCTCTACACCAACTATGGCAGACAGAAGAAACCAGAGAAGACCAACTGGGTTATGCATCAGTACCACCTTGGATCCAACGAGGAAGAGAAAGATGGAGAGTTAGTTGTCTCCAAGGTTTTCTTCCAGACACAACCCAGACAATGTGGTTCCATTCTTACTAAGGATCCATATGACCAAAAAGGATTACTAAACAACAACAATGATGATAACAACAATAATATGATTCTTCATGACAGTACAGCAAATATTATAGGTAAAGAAGCAGCAGCAGCTTTTGTGGACTATTACAGTAATGCCCCTTACATAAGTTATGACCCTGTGGGTCATAATAGTAATAACTCAGAAAGCTCCCCTCAACTTATTCCAAACTTGGTTCTTCAAGGTGACCATGCTTCTTCCTTTATCCGTTTAGCAATGGATCATCCAAACAAAGCAAGACTTGACAGAAAAATGTAG 1050 0.4238 MTWCNESSDEEEHNNNNNNSSNKAIQMVNSASIVTPPQASVVHDQTLTTKRASEIRTITCPSCGHNIQLQDQGGIHELPGLPAGVKFDPNDQEILEHLEAKALSDVRKIHPLIDEFIPTLEGENGICYTHPEKLPGVSKDGQIRHFFHRPSKAYTTGTRKRRKVHTDEDGSETRWHKTGKTRPVLWNGSVKGFKKILVLYTNYGRQKKPEKTNWVMHQYHLGSNEEEKDGELVVSKVFFQTQPRQCGSILTKDPYDQKGLLNNNNDDNNNNMILHDSTANIIGKEAAAAFVDYYSNAPYISYDPVGHNSNNSESSPQLIPNLVLQGDHASSFIRLAMDHPNKARLDRKM 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2847 349 MobiDBLite consensus disorder prediction 160 176 - -
Prci11g2847 349 MobiDBLite consensus disorder prediction 1 22 - -
Prci11g2847 349 Pfam No apical meristem (NAM) protein 82 221 IPR003441 GO:0003677|GO:0006355
Prci11g2847 349 Gene3D NAC domain 90 244 IPR036093 GO:0003677|GO:0006355
Prci11g2847 349 MobiDBLite consensus disorder prediction 154 176 - -
Prci11g2847 349 ProSiteProfiles NAC domain profile. 81 240 IPR003441 GO:0003677|GO:0006355
Prci11g2847 349 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 43 286 IPR044799 GO:0003700
Prci11g2847 349 FunFam NAC domain-containing protein 73 90 244 - -
Prci11g2847 349 SUPERFAMILY NAC domain 76 240 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2847 Prci-Chr11 44493844 44498119 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2847 1 248 NAC Transcription Factor Family AT4G28500 67.470 3.42e-120 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Prci11g2847 NAM 5.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2847 - - vra:106766970 452.21