Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2758 ATGAGGTCTGTGGGGCAAGAAGGGAACTTGATATCAGTTTCACCTGCAATAGGAAACTTTGAAGTGAAATCACCATCTAATTTTCCTTTTGTGGAAGGGAATGCAGCCATCACTAAAGTTTCTGTTCCTTCATATCATGCACCTACAATTAGAAAAAAAGATATTCAACTGGAACGTAGACTTTCAAGTAGTCCGGAGTCAAGAAAAAATCTGGATTTGGAAGATGACATAACTCAAGGATTAGAAGCAGATATTGAAAATGCTGGATCCCTTTTAAAGCGGAAAACATTTGGAGAATATAGTGAACCAAGTTGCAATTACACTTCATATTTACATGGTGCTAATAATGATATAAGTTGTGGGACGTCCAAGTCATTTACAGATTTTGGAAAAGATGGGACTATTGACCTGCAGAGCGATTGCTTTGTTGAGAAGGCTAGTGGTGATCGAAATCATGTAAAGCATCTTAGGAAGTTGAACATGCAATCAGGGGATGCTATGAACGCAATGACATCAAGGCATCCTTCTCCTGACTTGAGGACCAGAGATCTGTCTCCCTGTGCTGAGATTAAACTTGGAAACAAGCGTCATGCAATCCAATGTGCTTTTTTTGCCAAAGGTTGGTGCATCAGGGGTGATTCATGTAGCTTTCTTCATATAAAAGATCCTGTAAATAAATCAGGCCAGCAGATTGAAGGAGAATTGGTTGCTCAAAATTGGAAGAGAGAAGTGCAACCAGAGGAAGATATTGGAGATGATTTTAAGAGATCACTGATGCCTTGTACTCAAGTTCCGTTGCCTGCTACACAAGAAAGAACATCTCTGTATTCATCTGAATTTTACTCAAATGCAATCATCCAGAAAGTGTGCCCAAGCTGGGATCTAGATAAAAGTTGGCCTGTCTCTTCTTTCCCTTCCTACCCAGCCCATACAGAGGGAATGACTGCCACCCGGGGACTAGATATGCATTACGGATATACATCCGTAGTTGAGAGTCATTCACCTAATTTAAAATTCTCTTCATATGAATGGGAGCCATCTGTTCATTTTGAACCTTCTGTTTCTTCTGGTATGTGGTCAGTAGAAGATCAAAAAGACCCTTTTCATGGTAGTTTAGAGATACTCAATATAGGGGATGAATCCTTGAAAGCTTTCAATTTATCTCAAAGGTCATCCATTCAGAGTTCATATCAGGTGCCAAAAAATGGTGACTCCGCTGAAGCTGCAAGTCAGGTATTAGATCTTCGTGATGCCAAAAGTTCTGTTTCTTCTCATTATAGATGTAAACAGAATGAGCCTGAGAAGAGTTATGTTCCTCATGGAAAAAGTATTCTTGCAACTGAGACTGATAGAATAGCTCGAAGTTACCTAAATCGCCAATTTGGAAGGTTGGACATGGGACTAAATTTTACCTTTGAAGATGTTATAAATATAGAAAAAGAACAAATTGAGCATGATGCTAGACTTCAAGTTGAAGTAACACAGTACGAAAAACAAAAAGTAGATAGGGATAAGAAAAACAGTGAAATGGATAATAATTTTCAGAAGGATGATGGCGTGCAGATAGAAATGGCTCTGAGAAATTTTCGCTTTGCACTTGCTGATCATGTGAAAAAGATTCTAAGACCACTTTGGCATGAGGGTCATCTCAGCAAGGATGCGCATATCGTGATTGTTAAAAAATCAGTTGACAAGATTGTTGGCTCCTTACAGCCTCAGCAAATTCCTCCAAATGAGGATTCTGTCAAGAAGTACATTTCTTTTTGTCATGTGAAAGTAGTAAATCTGGTCAAAGAATATACCGGTATATATGGCAAGGTTTGA 1824 0.3887 MRSVGQEGNLISVSPAIGNFEVKSPSNFPFVEGNAAITKVSVPSYHAPTIRKKDIQLERRLSSSPESRKNLDLEDDITQGLEADIENAGSLLKRKTFGEYSEPSCNYTSYLHGANNDISCGTSKSFTDFGKDGTIDLQSDCFVEKASGDRNHVKHLRKLNMQSGDAMNAMTSRHPSPDLRTRDLSPCAEIKLGNKRHAIQCAFFAKGWCIRGDSCSFLHIKDPVNKSGQQIEGELVAQNWKREVQPEEDIGDDFKRSLMPCTQVPLPATQERTSLYSSEFYSNAIIQKVCPSWDLDKSWPVSSFPSYPAHTEGMTATRGLDMHYGYTSVVESHSPNLKFSSYEWEPSVHFEPSVSSGMWSVEDQKDPFHGSLEILNIGDESLKAFNLSQRSSIQSSYQVPKNGDSAEAASQVLDLRDAKSSVSSHYRCKQNEPEKSYVPHGKSILATETDRIARSYLNRQFGRLDMGLNFTFEDVINIEKEQIEHDARLQVEVTQYEKQKVDRDKKNSEMDNNFQKDDGVQIEMALRNFRFALADHVKKILRPLWHEGHLSKDAHIVIVKKSVDKIVGSLQPQQIPPNEDSVKKYISFCHVKVVNLVKEYTGIYGKV 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2758 607 Pfam Zinc finger C-x8-C-x5-C-x3-H type (and similar) 201 219 IPR000571 GO:0046872
Prci11g2758 607 ProSiteProfiles Zinc finger C3H1-type profile. 195 222 IPR000571 GO:0046872
Prci11g2758 607 PANTHER PROTEIN FRIGIDA-ESSENTIAL 1 160 234 - -
Prci11g2758 607 SUPERFAMILY CCCH zinc finger 195 219 IPR036855 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2758 Prci-Chr11 43230378 43236033 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Prci11g2758 zf-CCCH 4.5e-05 CL0537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2758 - - pcin:129285431 1216.83