Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2753 ATGTCTCCTTACAGAACTTTCTCACTCATCTTCGTCTTCATTTGCTTGAGATTTTCTCTCACTACTGTATCACAGACCTTTTATCTTGACCATGTCTGCTCTACCAACAAAACCTTCACTGCCAATAGTTCCTTTCAATCCGACCTCACCACCCTCCTCTCTTCCTTAGCTTCCCCAAATACTGCCAACACTGAGTTCTACAACACCACCGTCGCCGCCGCCGGAGCCAGCGGTGGCCACGATACCGTATACGGCCTTTTCATGTGCCGCGGCGATGTCTCCCTACAAGTGTGCCACCAATGCGTCGTTGACGCAACCAACCGGTTACCTTCCGAGTGCCGGTTCTCGAAGGCGGCCATAATCTGGTACAACGAGTGCATGCTTCGCTATTCGAACCAGTCCTTCTTCTCCGCCATGGCGACGAGGCCGATAACAGGCCTCTACAACACTGCCAATATGACCGACCAAGCAAGCTTCATGAGGTTGCTGTATAGAGTTGTGAACGAGACAGCTGATGTGGCTGCGAAACCAGGTTTGGGGAAGAAGAATTATGCAACTAAAGAAGTGAATATTTCGGAGTCTCAAACTCTGTATTGTTTGGCTCAGTGCACGCCGGATCTTTCGCCGGAAGATTGTAGAATGTGTTTGAGTGATGTGATTGGGAACCTTGATTGGTGTTGTGAGGGAAAGGACGGAGGAAGAGTTCTGAATCCCAGTTGCAATGTTCGTTATGAATTGTATCCCTTCTATGGTTCTGGTTATCAGCCGGTGGTGCCAGCACCGGCACCGGCGGCTGCGGTTTCTCCTCCGGCAAATTCTTCAGAACCCCTAGTAAAAGAGAAAGGCCAATCATCACCAACCATTGTGATAGTTGTGGTTTCTATTATTGGTTCGGGGATAGTTTTTGGTTTTACTTACTATCTCTTGAAGAGGCGAATAAAGAGGAATCGTAGAGATGCTCTCAGGCAAGAATACTTTGGAAGTGAAGGCACCACTTTAGAGCCACTACAATTCAGCTTAGCTACTATTGAAGCTGCTACAAATCAATTTTCTCAAGAAAACAGTTTTGGGAGAGGTGGATTTGGACACGTTTATAAGGGTATTCTTTCAAATGGCCGAGAAATAGCTGTAAGAAGACTCTCAAAAGTTGCTAGTCAAGGTGCAGAAGAATTTAAAAATGAGGTTTTGTTAATAGCCAAACTTCAGCACAGAAATTTGGTGGCATTATTAGGATTCTGCCTAGAAGAGCAAGAGAAAATACTTATTTATGAATATGTTCCCAATAGAAGCCTGGATTACTTTCTTTTTGGTTTGGAACCAATGGAATTCTGA 1332 0.4542 MSPYRTFSLIFVFICLRFSLTTVSQTFYLDHVCSTNKTFTANSSFQSDLTTLLSSLASPNTANTEFYNTTVAAAGASGGHDTVYGLFMCRGDVSLQVCHQCVVDATNRLPSECRFSKAAIIWYNECMLRYSNQSFFSAMATRPITGLYNTANMTDQASFMRLLYRVVNETADVAAKPGLGKKNYATKEVNISESQTLYCLAQCTPDLSPEDCRMCLSDVIGNLDWCCEGKDGGRVLNPSCNVRYELYPFYGSGYQPVVPAPAPAAAVSPPANSSEPLVKEKGQSSPTIVIVVVSIIGSGIVFGFTYYLLKRRIKRNRRDALRQEYFGSEGTTLEPLQFSLATIEAATNQFSQENSFGRGGFGHVYKGILSNGREIAVRRLSKVASQGAEEFKNEVLLIAKLQHRNLVALLGFCLEEQEKILIYEYVPNRSLDYFLFGLEPMEF 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2753 443 ProSiteProfiles Gnk2-homologous domain profile. 27 135 IPR002902 -
Prci11g2753 443 FunFam Cysteine-rich receptor-like protein kinase 25 143 249 - -
Prci11g2753 443 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 310 425 - -
Prci11g2753 443 Gene3D - 141 249 IPR038408 -
Prci11g2753 443 Gene3D - 25 135 IPR038408 -
Prci11g2753 443 ProSiteProfiles Protein kinase domain profile. 350 443 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2753 443 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 11 259 - -
Prci11g2753 443 Pfam Salt stress response/antifungal 152 247 IPR002902 -
Prci11g2753 443 Pfam Salt stress response/antifungal 33 133 IPR002902 -
Prci11g2753 443 ProSiteProfiles Gnk2-homologous domain profile. 141 249 IPR002902 -
Prci11g2753 443 SUPERFAMILY Protein kinase-like (PK-like) 326 439 IPR011009 -
Prci11g2753 443 Gene3D Phosphorylase Kinase; domain 1 312 425 - -
Prci11g2753 443 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 26 134 - -
Prci11g2753 443 Pfam Protein tyrosine and serine/threonine kinase 353 435 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2753 Prci-Chr11 43170899 43174514 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2753 10 439 Receptor kinase-like Gene Family AT4G05200 45.958 1.17e-119 363
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2753 Stress-antifung 1.5e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2753 - - pcin:129284856 851.277