Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2743 ATGGAAACGAGCAGAGCTGAGGGAAAGCGGAGCTCGAGGCACAGGGAGGAGGAAGACGAAGACGAAGAAGTAGAAGAAGACGATGAAGAAGAGACAGAGAGTGAACTTGGCTCTGGAGAAGAACATGGAAGAAAGAGAAGGGTTATAACAAATACATACAGCAAGAGAGGCCCCAAACCAGGAAGCTCGTCGTCGGCGCCGCCACCGTCTTGTCAGGCCGATGATTGCCACACTGATCTGAGCACCGCGAAACCGTATCACCGGCGACACAAGGTCTGTGAGTACCACGCCAAAGCTCCGGCCGTACTCATTTCAGGGCATGAGCAACGCTTTTGCCAGCAATGCAGCAGGTTTCATGAGCTTTCAGAGTTTGACAACTCAAAACGGAGTTGTAGAAGGCGTTTGGCTGGGCATAATGAGAGACGTCGAAAGGTTGCATCAGATTGTCAAGGAGAAGGCTATCATTAA 468 0.5107 METSRAEGKRSSRHREEEDEDEEVEEDDEEETESELGSGEEHGRKRRVITNTYSKRGPKPGSSSSAPPPSCQADDCHTDLSTAKPYHRRHKVCEYHAKAPAVLISGHEQRFCQQCSRFHELSEFDNSKRSCRRRLAGHNERRRKVASDCQGEGYH 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2743 155 Pfam SBP domain 71 144 IPR004333 GO:0003677
Prci11g2743 155 SUPERFAMILY SBT domain 69 148 IPR036893 GO:0003677|GO:0005634
Prci11g2743 155 MobiDBLite consensus disorder prediction 136 155 - -
Prci11g2743 155 MobiDBLite consensus disorder prediction 1 79 - -
Prci11g2743 155 MobiDBLite consensus disorder prediction 1 17 - -
Prci11g2743 155 MobiDBLite consensus disorder prediction 18 36 - -
Prci11g2743 155 FunFam Squamosa promoter-binding-like protein 14 62 132 - -
Prci11g2743 155 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 17 144 IPR044817 GO:0003677
Prci11g2743 155 ProSiteProfiles Zinc finger SBP-type profile. 68 145 IPR004333 GO:0003677
Prci11g2743 155 MobiDBLite consensus disorder prediction 55 77 - -
Prci11g2743 155 Gene3D - 61 132 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2743 Prci-Chr11 43005576 43008664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2743 6 153 SBP-box Gene Family AT3G15270 49.007 3.52e-40 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Prci11g2743 SBP 3.5e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2743 - - qsa:O6P43_031859 172.555