Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2734 ATGATGAGTACTAGTTCTATTGGGGACCATTCTCCTGGACGTCATCGGCAAGGGGATGCTGTTTTGGACTTGGATCTTAATAGGGATCCACCTGATGTGCATCAGGAGCAGGAGGGACCTTCAATTCTATCAGAATCTCGACGAGTAGTTCAGGCAGATTTTGATGAGGAGGCTGCAGATGATGATGTTATTGAATGTACACGAAGTGCTTTTGATGAGGCTAGAAATAACTCGAGAAGAAATCGTTGGAGGACTATAGTTGATGTGGATTTAGATAATGCAAGTCAGAGGACTGAAATTTCTCCCAACTATCGTAGAAGAGATTCTTTGAACCAAACAGTTCCTAATCTTGAACTAACATTAAACTTGGAAGGCAATAACAATTCTGAGAGGGAGACACACATAAAGTCACCTGAACCTCCAAAAGAACCTGTCTTTAACTGTCCAATATGTAAGCAACCATTTGTGGAAGAAATGTCTACAAGGTGTGGTCATATATTTTGTAAGAAATGTATTAAAGCTGCTTTAAAAGCAAAACGTGAATGCCCTATATGTGAAGAAAAGATCACTTCAAAAGGGCTTGTAAGGGTGTTTCTACCATCAACTGGTTCTCCTTGA 618 0.4013 MMSTSSIGDHSPGRHRQGDAVLDLDLNRDPPDVHQEQEGPSILSESRRVVQADFDEEAADDDVIECTRSAFDEARNNSRRNRWRTIVDVDLDNASQRTEISPNYRRRDSLNQTVPNLELTLNLEGNNNSERETHIKSPEPPKEPVFNCPICKQPFVEEMSTRCGHIFCKKCIKAALKAKRECPICEEKITSKGLVRVFLPSTGSP 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2734 205 SUPERFAMILY RING/U-box 147 192 - -
Prci11g2734 205 ProSiteProfiles Zinc finger RING-type profile. 148 186 IPR001841 -
Prci11g2734 205 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 118 201 IPR013083 -
Prci11g2734 205 ProSitePatterns Zinc finger RING-type signature. 163 172 IPR017907 -
Prci11g2734 205 PANTHER ELFLESS, ISOFORM B 2 202 - -
Prci11g2734 205 SMART ring_2 148 185 IPR001841 -
Prci11g2734 205 MobiDBLite consensus disorder prediction 24 44 - -
Prci11g2734 205 Pfam Zinc finger, C3HC4 type (RING finger) 147 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2734 Prci-Chr11 42632924 42636589 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2734 14 202 C3H Transcription Factor Family AT3G07200 40.526 1.61e-34 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2734 K22651 - cave:132188663 184.882