Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2727 ATGATCAAACTCAAGTACCATCCACTATGTTTCTTCCCTCATGTCCTTCTTCTTCTGTTCTTCTCCTTCTCCGATTCATCTCTCGCCGTCGATTTTGTCTTCAACGGCTTCAACTTCTCCGATGTCTTGCTCTACGGCAACGCCACCGTTGATTCTGGAATCCTATCTCTCACTCATGACCAAGCTTTCTCTATCGGTCGTGCTCTTTACCCTCAGAAGATTCCCACCAAGATCCCAAATTCTTCATTCGTGTACCGTTTTTCTGCTTCGTTCATTTTCGCCATGGCTCCTTATAAGAATATCCTTCCTGGCCATGGCTTTGTGTTCATCTTCACGCCTGTTCGTGGAATCCAAGGTGCAAACTCTGCTCAGCACTTGGGTTTCTTAAACTTCACCAACAATGGCGATTCCGGTAACCACGTGTTCGGTGTTGAGTTCGATGTGTTCATGAATCAAGAGTTCGATGACATAAACGCCAATCACGTTGGGATCGACGTGAACTCTCTCAAATCTATCGCGGCACACGACGCCGGGTACTGGCCGGAGGACGACAACGACAAGTCGTTCCAAGAATTGAAGCTGAACGACGGATTGACCATCGGGATTTTCTTCCTACTCTGTTTCGTCGTTCTGTTGACTCTGTTTTTAATACAGAGAAAACGAAGGAAAGCTCGGGAAAGAGAAGCAATGGAGGACTGGGAATTAGAGTACTGGCCACACAGAATAACGTACGAAGAAATCGAATCAGCAACAAAAGGATTCTCGGAGGAAAACGTGATCGGAATCGGAGGAAACGGCAAAGTATACAAAGGAAACCTAGGAGGAACAGAAATCGCAGTGAAACGAATCTCCCATGAGAATAACGGAATGAGAGAATTCCTAGCAGAAATCTCCAGTCTGGGAAGACTCAAACACAGAAACCTCGTAAAATTACGAGGATGGTGCAAGAAAGACGCAGGTAATTTCTTACTAATCTACGAATACATGGAAAATGGGAGTCTAGAAAAGAGAGTATTTGAAAACGAAGAAGACGACAAGATCCTTAACGGTGAAGAGAGGATAAGGATTCTGAAGGATGTAGCTTGTGGGGTCGTGTACTTGCATGAAGGGTCGGAAGCAAAAGTAGTGCACAGAGATATTAAAGCGAGCAACGTACTGTTAGATAAGGAGCTTAATGGAAGGTTAGGAGACTTTGGGTTAGCGTTAATGCAGAACAATAAGGGTGAAGTGGCGAGTACCACGAAAGTAGTTGGGACGGTGGGCTACATGGCGCCTGAAATGATGAAGACTGGAAGAGCATCGATTCAGAGCGATGTTTACATGGTTGGAATATTGGTTTTGGAGGTCATGTGTGGAAGGAGACCTATTGAGGAAGGAAAGCCATCTTTGGTGGAGTGGGTGTGGCAACTCAAAGCACAAGGGCAATTAATAAGTGCAATGGATGAGAGATTGAGGGCAAAAGGAGAAGTGAATGAACAACAAATAGAAACTATACTTAACTTGGGATTATTGTGTGCTTATCCTGACCCAAAAGCCAGGCCAACAATGAGACAAGTTTTGAAAGTTTTAGAGGGAAAGAGCAACAATAATAATAGCAATAACAATGAAGATGGAGATCAGTATGATGAGAGTGAAGATTTGGATACTTACCTACTTAAACACATAAGATCACCAAGGGACATTTGGTCTGAGTATTCAAATTACTTTAACTTCTCATCTCACCCAACATTTGAAGATGTTAGACTACACGCTACTTCTCACTCATCTTCAACCTCTCGCCATTATTCTTTCTCTCATTCTATTGTTGATGGAAGGTAA 1818 0.4345 MIKLKYHPLCFFPHVLLLLFFSFSDSSLAVDFVFNGFNFSDVLLYGNATVDSGILSLTHDQAFSIGRALYPQKIPTKIPNSSFVYRFSASFIFAMAPYKNILPGHGFVFIFTPVRGIQGANSAQHLGFLNFTNNGDSGNHVFGVEFDVFMNQEFDDINANHVGIDVNSLKSIAAHDAGYWPEDDNDKSFQELKLNDGLTIGIFFLLCFVVLLTLFLIQRKRRKAREREAMEDWELEYWPHRITYEEIESATKGFSEENVIGIGGNGKVYKGNLGGTEIAVKRISHENNGMREFLAEISSLGRLKHRNLVKLRGWCKKDAGNFLLIYEYMENGSLEKRVFENEEDDKILNGEERIRILKDVACGVVYLHEGSEAKVVHRDIKASNVLLDKELNGRLGDFGLALMQNNKGEVASTTKVVGTVGYMAPEMMKTGRASIQSDVYMVGILVLEVMCGRRPIEEGKPSLVEWVWQLKAQGQLISAMDERLRAKGEVNEQQIETILNLGLLCAYPDPKARPTMRQVLKVLEGKSNNNNSNNNEDGDQYDESEDLDTYLLKHIRSPRDIWSEYSNYFNFSSHPTFEDVRLHATSHSSSTSRHYSFSHSIVDGR 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2727 605 Gene3D Transferase(Phosphotransferase) domain 1 329 550 - -
Prci11g2727 605 PANTHER - 47 196 - -
Prci11g2727 605 Pfam Legume lectin domain 30 197 IPR001220 GO:0030246
Prci11g2727 605 MobiDBLite consensus disorder prediction 524 543 - -
Prci11g2727 605 FunFam L-type lectin-domain containing receptor kinase S.4 329 536 - -
Prci11g2727 605 Pfam Protein kinase domain 255 521 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2727 605 CDD lectin_legume_LecRK_Arcelin_ConA 30 186 IPR001220 GO:0030246
Prci11g2727 605 ProSiteProfiles Protein kinase domain profile. 254 527 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2727 605 Gene3D - 28 201 - -
Prci11g2727 605 Gene3D Phosphorylase Kinase; domain 1 216 328 - -
Prci11g2727 605 SUPERFAMILY Concanavalin A-like lectins/glucanases 30 186 IPR013320 -
Prci11g2727 605 SUPERFAMILY Protein kinase-like (PK-like) 231 525 IPR011009 -
Prci11g2727 605 CDD STKc_IRAK 260 525 - -
Prci11g2727 605 ProSitePatterns Serine/Threonine protein kinases active-site signature. 375 387 IPR008271 GO:0004672|GO:0006468
Prci11g2727 605 ProSitePatterns Protein kinases ATP-binding region signature. 260 281 IPR017441 GO:0005524
Prci11g2727 605 SMART serkin_6 254 523 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2727 605 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 216 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2727 Prci-Chr11 42373696 42377739 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2727 202 476 Receptor kinase-like Gene Family AT4G04960 64.664 1.45e-120 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Prci11g2727 Pkinase 7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2727 - - dzi:111282065 615.535