LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci11g2726	ATGATCAAACTCAAGTACCATCCACTATGTTTCTTCCCTCATGTCCTTCTTCTTCTGTTCTTCTCCTTCTCCGATTCATCTCTCGCCGTCGATTTTGTCTTCAACGGCTTCAACTTCTCCGATGTCTTGCTCTACGGCAACGCCACCGTTGATTCTGGAATCCTATCTCTCACTCATGACCAAGCTTTCTCTATCGGTCGTGCTCTTTACCCTCAGAAGATTCCCACCAAGATCCCAAATTCTTCATTCGTGTACCGTTTTTCTGCTTCGTTCATTTTCGCCATGGCTCCTTATAAGAATATCCTTCCTGGCCATGGCTTTGTGTTCATCTTCACGCCTGTTCGTGGAATCCAAGGTGCAAACTCTGCTCAGCACTTGGGTTTCTTAAACTTCACCAACAATGGCGATTCCGGTAACCACGTGTTCGGTGTTGAGTTCGATGTGTTCATGAATCAAGAGTTCGATGACATAAACGCCAATCACGTTGGGATCGACGTGAACTCTCTCAAATCTATCGCGGCACACGACGCCGGGTACTGGCCGGAGGACGACAACGACAAGTCGTTCCAAGAATTGAAGCTGAACGACGGTGAGAATTACCAGGTTTGGATTGACTATGAAGATTCTTTGTTTAGCATAACTATGGCACCAGTTGGCACAAAACGACCACGTAGGCCACTGTTGAATGTGTCGTTGAACTTATCTGAGGTTTTTGAAGATGAAATGTATGTCGGGTTTACAAGTTCCACAGGGCAATTAGTTCAAAGTCACAAGATTTTGGCTTGGAGCTTCAGTAATTCAAATTTTTCACTCAGCGAGGCGTTAATTACTTCTGGATTACCCTCTTTTGTTCTTCCAAAAGATTCAATCATACAATCTAAAGGGTTTATTGCAGGATTGACCATCGGGATTTTCTTCCTACTCTGTTTCGTCGTTCTGTTGACTCTGTTTTTAATACAGAGAAAACGAAGGAAAGCTCGGGAAAGAGAAGCAATGGAGGACTGGGAATTAGAGTACTGGCCACACAGAATAACGTACGAAGAAATCGAATCAGCAACAAAAGGATTCTCGGAGGAAAACGTGATCGGAATCGGAGGAAACGGCAAAGTATACAAAGGAAACCTAGGAGGAACAGAAATCGCAGTGAAACGAATCTCCCATGAGAATAACGGAATGAGAGAATTCCTAGCAGAAATCTCCAGTCTGGGAAGACTCAAACACAGAAACCTCGTAAAATTACGAGGATGGTGCAAGAAAGACGCAGGTAATTTCTTACTAATCTACGAATACATGGAAAATGGGAGTCTAGAAAAGAGAGTATTTGAAAACGAAGAAGACGACAAGATCCTTAACGGTGAAGAGAGGATAAGGATTCTGAAGGATGTAGCTTGTGGGGTCGTGTACTTGCATGAAGGGTCGGAAGCAAAAGTAGTGCACAGAGATATTAAAGCGAGCAACGTACTGTTAGATAAGGAGCTTAATGGAAGGTTAGGAGACTTTGGGTTAGCGTTAATGCAGAACAATAAGGGTGAAGTGGCGAGTACCACGAAAGTAGTTGGGACGGTGGGCTACATGGCGCCTGAAATGATGAAGACTGGAAGAGCATCGATTCAGAGCGATGTTTACATGGTTGGAATATTGGTTTTGGAGGTCATGTGTGGAAGGAGACCTATTGAGGAAGGAAAGCCATCTTTGGTGGAGTGGGTGTGGCAACTCAAAGCACAAGGGCAATTAATAAGTGCAATGGATGAGAGATTGAGGGCAAAAGGAGAAGTGAATGAACAACAAATAGAAACTATACTTAACTTGGGATTATTGTGTGCTTATCCTGACCCAAAAGCCAGGCCAACAATGAGACAAGTTTTGAAAGTTTTAGAGGGAAAGAGCAACAATAATAATAGCAATAACAATGAAGATGGAGATCAGTATGATGAGAGTGAAGATTTGGATACTTACCTACTTAAACACATAAGATCACCAAGGGACATTTGGTCTGAGTATTCAAATTACTTTAACTTCTCATCTCACCCAACATTTGAAGATGTTAGACTACACGCTACTTCTCACTCATCTTCAACCTCTCGCCATTATTCTTTCTCTCATTCTATTGTTGATGGAAGGTAA	2124	0.4275	MIKLKYHPLCFFPHVLLLLFFSFSDSSLAVDFVFNGFNFSDVLLYGNATVDSGILSLTHDQAFSIGRALYPQKIPTKIPNSSFVYRFSASFIFAMAPYKNILPGHGFVFIFTPVRGIQGANSAQHLGFLNFTNNGDSGNHVFGVEFDVFMNQEFDDINANHVGIDVNSLKSIAAHDAGYWPEDDNDKSFQELKLNDGENYQVWIDYEDSLFSITMAPVGTKRPRRPLLNVSLNLSEVFEDEMYVGFTSSTGQLVQSHKILAWSFSNSNFSLSEALITSGLPSFVLPKDSIIQSKGFIAGLTIGIFFLLCFVVLLTLFLIQRKRRKAREREAMEDWELEYWPHRITYEEIESATKGFSEENVIGIGGNGKVYKGNLGGTEIAVKRISHENNGMREFLAEISSLGRLKHRNLVKLRGWCKKDAGNFLLIYEYMENGSLEKRVFENEEDDKILNGEERIRILKDVACGVVYLHEGSEAKVVHRDIKASNVLLDKELNGRLGDFGLALMQNNKGEVASTTKVVGTVGYMAPEMMKTGRASIQSDVYMVGILVLEVMCGRRPIEEGKPSLVEWVWQLKAQGQLISAMDERLRAKGEVNEQQIETILNLGLLCAYPDPKARPTMRQVLKVLEGKSNNNNSNNNEDGDQYDESEDLDTYLLKHIRSPRDIWSEYSNYFNFSSHPTFEDVRLHATSHSSSTSRHYSFSHSIVDGR	707

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci11g2726	707	Pfam	Legume lectin domain	30	268	IPR001220	GO:0030246
	Prci11g2726	707	CDD	lectin_legume_LecRK_Arcelin_ConA	30	262	IPR001220	GO:0030246
	Prci11g2726	707	CDD	STKc_IRAK	362	627	-	-
	Prci11g2726	707	Gene3D	Transferase(Phosphotransferase) domain 1	431	652	-	-
	Prci11g2726	707	Gene3D	-	29	274	-	-
	Prci11g2726	707	FunFam	Putative L-type lectin-domain containing receptor kinase VII.2	318	430	-	-
	Prci11g2726	707	ProSiteProfiles	Protein kinase domain profile.	356	629	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci11g2726	707	MobiDBLite	consensus disorder prediction	626	645	-	-
	Prci11g2726	707	FunFam	L-type lectin-domain containing receptor kinase S.4	431	638	-	-
	Prci11g2726	707	SUPERFAMILY	Concanavalin A-like lectins/glucanases	29	269	IPR013320	-
	Prci11g2726	707	Pfam	Protein kinase domain	357	623	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci11g2726	707	FunFam	L-type lectin-domain containing receptor kinase S.4	28	272	-	-
	Prci11g2726	707	PANTHER	-	48	629	-	-
	Prci11g2726	707	SUPERFAMILY	Protein kinase-like (PK-like)	333	627	IPR011009	-
	Prci11g2726	707	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	477	489	IPR008271	GO:0004672\|GO:0006468
	Prci11g2726	707	SMART	serkin_6	356	625	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci11g2726	707	ProSitePatterns	Protein kinases ATP-binding region signature.	362	383	IPR017441	GO:0005524
	Prci11g2726	707	Gene3D	Phosphorylase Kinase; domain 1	318	430	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci11g2726	Prci-Chr11	42373696	42377740	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci11g2726	29	572	Receptor kinase-like Gene Family	AT4G04960	64.481	0.0	692

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Prci11g2726		Pkinase	9.9e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci11g2726	-		-	gmx:100804391	984.941