Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2718 ATGGGTGAGAGCTCGGAAGGACTTCGCGTGAAGACACTACCGCCGGAGAGCTCATCGGACGGAGATGGAAACTCCCCGGAATACTCCTGGGACTACGACGACACCACCACCATATTCTCTCCCTATGGCAGCTCTTCTGAGTTTTCCAGCTGCGACAACAAAGGGAGGGCGTCGAAGACGGTGAGGGGTGTGGGCAGGGTGGGAGGCGAAGGCGTGGCGGCGGAGAAAGATTCCAACGACCCTTTTCTGGACATCAGGCATTCCCTCCTCCAAATGATACTGGAGAATAAGATTTACGTGGCGGACGATTTCAGAAAGCTTCTGCGATGCTTTCTTCTGCTCAATTCACCGTACCACCATGGGTTATTGTCAGAGCTTTCTTCTACGAACTTTTTGTAA 399 0.5288 MGESSEGLRVKTLPPESSSDGDGNSPEYSWDYDDTTTIFSPYGSSSEFSSCDNKGRASKTVRGVGRVGGEGVAAEKDSNDPFLDIRHSLLQMILENKIYVADDFRKLLRCFLLLNSPYHHGLLSELSSTNFL 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2718 132 ProSiteProfiles OVATE domain profile. 74 132 IPR006458 -
Prci11g2718 132 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 47 122 IPR038933 GO:0045892
Prci11g2718 132 MobiDBLite consensus disorder prediction 1 32 - -
Prci11g2718 132 MobiDBLite consensus disorder prediction 17 32 - -
Prci11g2718 132 MobiDBLite consensus disorder prediction 45 78 - -
Prci11g2718 132 Pfam Transcriptional repressor, ovate 78 122 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2718 Prci-Chr11 41814567 41815078 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Prci11g2718 Ovate 7.4e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2718 - - pcin:129286513 253.062