Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2693 ATGGCTGAGACCTCTACAAATAAAGAAACCCATGATGTGGTTGTTCTCAATGTCAATGGTGCAAAATCTAATGCAGGCTCCAACATCTTTGTCTCTGTCCCTTTCTTACAGAAGTTGGTGGCAGAGTTAGTGGGGACATACTTTCTGATATTTATCGGAGGAGCATCAGTAATTGTGAATGCGAACAACGAGAACATGGTAACGCTGCCAGGGATTTGCATGGTTTGGGGTCTTCTCGTGATGGGTCTAGTCTACACTGTTGGTCACATCTCTGGTGCCCATTTCAATCCTGCTGTCACTCTCGCTTTTGCTTCCATTAAACGATTTCCTCTCAAACAGGTACCAGCTTATATATTAATCCAAGTTGTAGGATCCACTCTTGCAAGTGTGACTCTAAGACTTGTTTTCACAGGAAAACATGACCACTTCATAGGAACATTGTTGTCTGGCTCATATCTTCAGGGCTTTGTGGTTGAATTCCTCGTCACTTTCTATCTTATGTTTGTCATCTCTGGTGTGGCCACTGATAGCAGAGCGATTGATGAGCTAGCTGGGCTTGTCGTAGGGGCAACCGTGATGATTAACTCGTTAACAGCAGGGCTGGTGACCGGAGCATCAATGAACCCAGCGAGAACCCTAGGGCCGGCAATCGCATGGCATGAGTATAGAGGAATATGGGTGTATATGATAGCACCAGTGGCAGGAGCGGTAGTGGGTGCATGGGTTTATAACATCATGAGGCATACAAACAAGTCATCAATACATGAGATCACAAAAAGTACTTCTTTTCTCAAAGGTTCAAGCTCCAGTAGTTGTGGAGCCAAGTGA 828 0.4505 MAETSTNKETHDVVVLNVNGAKSNAGSNIFVSVPFLQKLVAELVGTYFLIFIGGASVIVNANNENMVTLPGICMVWGLLVMGLVYTVGHISGAHFNPAVTLAFASIKRFPLKQVPAYILIQVVGSTLASVTLRLVFTGKHDHFIGTLLSGSYLQGFVVEFLVTFYLMFVISGVATDSRAIDELAGLVVGATVMINSLTAGLVTGASMNPARTLGPAIAWHEYRGIWVYMIAPVAGAVVGAWVYNIMRHTNKSSIHEITKSTSFLKGSSSSSCGAK 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2693 275 Pfam Major intrinsic protein 31 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g2693 275 ProSitePatterns MIP family signature. 94 102 IPR022357 -
Prci11g2693 275 CDD MIP 37 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g2693 275 PRINTS Major intrinsic protein family signature 37 56 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g2693 275 PRINTS Major intrinsic protein family signature 76 100 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g2693 275 PRINTS Major intrinsic protein family signature 226 246 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g2693 275 PRINTS Major intrinsic protein family signature 158 176 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g2693 275 PRINTS Major intrinsic protein family signature 113 132 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g2693 275 PRINTS Major intrinsic protein family signature 189 211 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g2693 275 PANTHER AQUAPORIN NIP2-1 23 265 IPR034294 -
Prci11g2693 275 NCBIfam MIP family channel protein 41 243 IPR000425 GO:0015267|GO:0016020|GO:0055085
Prci11g2693 275 SUPERFAMILY Aquaporin-like 31 254 IPR023271 -
Prci11g2693 275 Gene3D Glycerol uptake facilitator protein. 2 260 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2693 Prci-Chr11 40458600 40462249 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2693 37 275 Major Intrinsic Protein MIP AT5G37820 53.975 3.06e-87 261
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2693 K09874 - gmx:100798526 335.109