Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2670 ATGGCTTCGTCCCAAGTTGAATTTGCTTCATCATCAACCTCGCCATTTAGTTGCATCAATACGAGGAATCGCCACCACCATCATCGAGCCCCACAAGCCAAACATTTTTTCAACCATTTCGCCAAAGACCAACTTAACAACGACAATAATTCCCATATATCTTGGGACACAAAGAACAACCTTGGAACCCTACGTTTTGCATCCAACAAAAGAGATCAAGATGAGTCGTCGTTGTCGTCCTCAAGCCCTAACCGAGAAGAACCATCACCGTCTTCGTTTTCGTCATCGTCCTCGCCGTCATCATTGTTGTCACCGCCTTTAAGAAAACAAAAACCATCTCCTATTCCTGTTCCTTCAGATTTCTCACCCTGTGATATCTCAAACCTTGGAGCTTCATCACTGGTTCAAATATGGGAAAAGAGACTAACCCAATCATCATCAAACACGACGACGTCCAAGTCATCGTCAACTCCAAAATCAAGCCCTAACGCATCATCTTCACCGCAAAGTTCATCAGATGATTCATCACCACAAGGGCAGATTCACAATGAAGGAGATCATTATCAGAGCGAGAGATCAGTACATAGGGTGGCAGATATTATTAAAAGGCTAACTTTGACGACGACGACGACAAGCAGTGAAGAGATTAACGTGGATAATAATAATAATCAATCTCATCAAGATCAGCAAAATTATGGCATGGGATCTCCAGAACAATTACTAATAGAGAATAATAGGAGCTTTGTGATAAATTCTCCGAGAATTAGAGGAAGACAAGCCTTCAATGATTAGCTTATGCAGATGGAGCGTGATCGTCATCGCGAGCTCAATAATCTTGCAGATCGTGCAGCTGTTTCCAAGTTTTCGCATAGAGGTCGGATTCAGTCATTACTTCGACTAAGACTAATGCAGCATGGCATGGTAGCTAAAGATGAACGTCGCTTGCCATCAACAACATCACAAGAGATCAAGCAATTACCTCAAGGATCTGTTATTATGCGCTTAAGGGAAAGGTTTAGCACAAGAGTAACAAATGGAAGTGCAGTAGAAGCAGAAGTAGCTGAAACAACAACTCCTTGTAGAGAAAAAGAAAACATAGTCACACCACCACCATTATATATTAATCCTCCAAACCCTACCCAAAACTCTCTGTCCCATGCAGATCAAAACAAAGAAGAAGAAGAAGAAAAAGAAGCTAGTCCATGTTCAGATGTCTCGGTACCGAGTTCTGAGGCTCAAAACGCGGAAACTTCTTCTCCCATGGTTGATCTGAATGCAGAATCCGAGGTATTAGAGAATGTTGAAGTAAGGGAGGAGAAGCATGATGATGTTGCTGATCAATTAATCAGTTCTGGTGAGGTGGAAGAGGAAGAGGAAGAAGAAGAAGAAGGAAGTGAGGATGAGTATGGTGAGAGAATCTATGATAAGATAGAAGAGATAGAGACCAGCGAAGCTAATTTTGATTGGATTAGTCAGATTTCTAAACCTAAGAGCTATTGGGAAGATCTTAGGCAGGCTTGGTATAAGGAGATGCTTGATCATGAATCACAAAATTATGACATCTGCCAACTGCTTCAAAGAAAAACGGTGTCAAATGTTTTAGGTAGTGACTTCCGGGAAAGAATGGACAGGTTAATGGAGTCTCACCTGCAAGGAACACAAACAAATTTTTTGGCTAGTCGAGATGATGATGATGAAGTCAACCACCATGGGAAAATGGAGAAATTGATAGCGTTTTTACAGCAACGACTGAATCCTGCAAAAAGTGATCAAGAGAAGGAGATCAAAGAAGAAGAGAAACATGAGGAAGAGGAAGAAGAGGAGATTCTGATAAGTGATTCCTATAATGGAGAGAGTGACTCTATGAACCAGTCATCACCATCACAATGCAGAGACAATTTTAACGAAGATGGTGATGATTCTGAGTTTAGATCAGTATCTGCATCATTAAGACAACCTTCTCAATCTCCCTCTTTCTTTCAGTATGCTCGCCAAAACTCTTCACCCAGGAATCCTCCTTCAATTGAAATGGAGCTCATCTATGATTTGAGAGGGCATATGAAGCAGCTCTGTCAAGAGATGTCTGAGTTAAGGAAATCAATTAGGAGCTGCATGGATATGCAAATGAGCTTACAAAAATCATTGGATCGAGAGAATCATACAGCTAAAGGAAAGAAGTCCCATGAAAGAGTATTGAAGAAAGGACACTGCTGTATTTGCTCAAAGTTGAAAGCTGATTCACTTTTATATAGGTGTGGCCATATGTGCACGTGCCTAAAATGTGCCAATGAGTTACAATGGAAAAATGGGAAGTGTCCAATCTGTGAGGCTCCAATAGTAGATATTGTTCGAGTATTTGTTGATGCATAG 2370 0.4101 MASSQVEFASSSTSPFSCINTRNRHHHHRAPQAKHFFNHFAKDQLNNDNNSHISWDTKNNLGTLRFASNKRDQDESSLSSSSPNREEPSPSSFSSSSSPSSLLSPPLRKQKPSPIPVPSDFSPCDISNLGASSLVQIWEKRLTQSSSNTTTSKSSSTPKSSPNASSSPQSSSDDSSPQGQIHNEGDHYQSERSVHRVADIIKRLTLTTTTTSSEEINVDNNNNQSHQDQQNYGMGSPEQLLIENNRSFVINSPRIRGRQAFNDXLMQMERDRHRELNNLADRAAVSKFSHRGRIQSLLRLRLMQHGMVAKDERRLPSTTSQEIKQLPQGSVIMRLRERFSTRVTNGSAVEAEVAETTTPCREKENIVTPPPLYINPPNPTQNSLSHADQNKEEEEEKEASPCSDVSVPSSEAQNAETSSPMVDLNAESEVLENVEVREEKHDDVADQLISSGEVEEEEEEEEEGSEDEYGERIYDKIEEIETSEANFDWISQISKPKSYWEDLRQAWYKEMLDHESQNYDICQLLQRKTVSNVLGSDFRERMDRLMESHLQGTQTNFLASRDDDDEVNHHGKMEKLIAFLQQRLNPAKSDQEKEIKEEEKHEEEEEEEILISDSYNGESDSMNQSSPSQCRDNFNEDGDDSEFRSVSASLRQPSQSPSFFQYARQNSSPRNPPSIEMELIYDLRGHMKQLCQEMSELRKSIRSCMDMQMSLQKSLDRENHTAKGKKSHERVLKKGHCCICSKLKADSLLYRCGHMCTCLKCANELQWKNGKCPICEAPIVDIVRVFVDA 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2670 789 MobiDBLite consensus disorder prediction 430 448 - -
Prci11g2670 789 MobiDBLite consensus disorder prediction 387 401 - -
Prci11g2670 789 MobiDBLite consensus disorder prediction 403 424 - -
Prci11g2670 789 ProSiteProfiles Zinc finger RING-type profile. 737 776 IPR001841 -
Prci11g2670 789 MobiDBLite consensus disorder prediction 357 468 - -
Prci11g2670 789 MobiDBLite consensus disorder prediction 614 632 - -
Prci11g2670 789 Pfam Zinc finger, C3HC4 type (RING finger) 734 781 - -
Prci11g2670 789 MobiDBLite consensus disorder prediction 599 613 - -
Prci11g2670 789 Coils Coil 587 608 - -
Prci11g2670 789 CDD mRING-HC-C3HC5_NEU1 734 786 - -
Prci11g2670 789 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 712 788 IPR013083 -
Prci11g2670 789 MobiDBLite consensus disorder prediction 66 107 - -
Prci11g2670 789 PANTHER BNAC05G24000D PROTEIN 382 788 - -
Prci11g2670 789 MobiDBLite consensus disorder prediction 13 33 - -
Prci11g2670 789 MobiDBLite consensus disorder prediction 145 194 - -
Prci11g2670 789 MobiDBLite consensus disorder prediction 645 673 - -
Prci11g2670 789 MobiDBLite consensus disorder prediction 145 184 - -
Prci11g2670 789 MobiDBLite consensus disorder prediction 580 674 - -
Prci11g2670 789 MobiDBLite consensus disorder prediction 66 126 - -
Prci11g2670 789 MobiDBLite consensus disorder prediction 449 468 - -
Prci11g2670 789 MobiDBLite consensus disorder prediction 212 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2670 Prci-Chr11 39716169 39725864 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2670 737 785 C3H Transcription Factor Family AT3G06140 38.776 1.21e-06 49.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2670 - - pcin:129284964 1384.01