Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2654 ATGGATCCCGCTACTTGTTTTATTGAAAAGCTTCTAGAAAAGCTTCTAGATTATACAATAAATGCCTTGGGACGGCAAGTTGGCTACATGATTTTCTATCGCAACAACATTGATGAGCTAAGGAGTCAAATGCAAGATCTCAATCAAAAGCAAGAAGCTATGCAACATTTAATCGACGAGGCTATAAGAAATTGTGAAAGAATTGAACTGCAAGTTGAAAGTTGGATGAGTGGAGTGGATGATATAAAAATGCAAGCAGAACAATTCTTTAATGAAGAAGGCCAATCACAAACTAGATGTAGCAGAACTTCATGCCCAAATTTATGTTCATGTTATCAACTGAGTAGAAGAGCAAAGAAGATGGCACTGAAAGTCAAAGACCTTGCAAAGAAAAAGAAAGACTTAAACAAAGTTTCACATCTTCCTTCTCCCAAATGCAGGCACTTAATAGATGACAAAATGAATGAAGGGCTTGATTCAAGGTTGCAAATTATAGATCAAGTTATGGAGGCATTGCGAAATTCGAGCATTAATATGGTCGGGTTGTGTGGGCTTGGTGGCATTGGCAAGACCACAATAGCTAAAGAGGTAGCAAAGAAGTTGGAGAATAAAAAAATGTTTAGGAAGGTGATCATGGTAACTATTTCTAAGGACATGAATATTGTAGAAATTCAAAGGCAGATTGTTGAGATGTTGGGTATGCGACTCGAGGAAGTAAATGAAGAAGTAAGATCTTCTCGTCTTTTTGATAGGTTGAAGCAAGAGGAGAATATGCTCCCAATATTGGATGATCTTTGGGGAGAACTTGATTTTGGAAAAGTTGGAATTCCCTTTATTGGGGACAAAAATAATAACAAAAAGAATGAAGGTTGCAAAATCTTACTGACTTCAAGAAATAAAACACTACTTTCAGACGTAATGAAATGTGAAAAGATCATCGGAGTGGGTGTTTTGCAAGAAGAAGAAGCACAGGAGTTGTTCAAGAGGATTGCTGAACTTTCTATTGAATCAAGCAATCCTGGTTTGATGTCTATAGCCGGTGAGATTGTTCAAAAGTGTGGAGGGTTGCCGCTAGCAATTGTTACAGCTGCAAAAGCATTGAGGAATAAAGATCAAAATATATGGGAAGATGCCCTTACACGATTGAGAAATCCTTTACGGAGAAACATCACAGGAATTAAAGAGGTGGATCAGATTTTAAGGTTGAGCTACGATCAGCTAACCAAAGAGAACCAACATATTTTCTTGTTCTCATCCATGTTGTCTCATGATCCCTTAATTCAAGACTTGCTCATGTACTCTGTGGGGTTAGGTTTTCTTAAACACATTGAAAACATGGAAGATGCTCGAGTCGGAATATCTGCTGTTGTAAGTAAGCTAAAATCATTGAATTTATTTCTTGATAGCTTTTCTAGTCAACATTTTACCATCCATGATGTCATTCGGGATGTTGCACTATCTATTGCATCCAATGAATTATGTGCCTTCATTTGGAGACATAAAAGGTTGAATGCATGGCCAGAGCAGAATTTGCTAGAAGGCTACAAGGGAATTTGCTTAGAAAAAAGTGACATTAGGGATCTTCCAGAAGAGTTACTTGCTCCAAGGTTAGAATTCTTCCTATTAAATAGTGAAAATCGTGATTTGGCCATACCGGATACCTTTTTCAAATCTACAAAAGATCTTAAATTGTTGAGTTTTATCAATGTGTGCTTTTCATCATTGCCATTTCTTAATTCTCTAAAAAAGCTCAAAACTTTATGCCTCCATTCTTGTTTGTTGAAAGACATGACTCAGGTTGGAAGCTTGAAGCAATTAACAACCTTGAGTCTTGCTTATTCTGAAATTGAACATTTGCCATTTGAATTGGCGATGTTGACTTCATTACAAATGCTAAATCTAGCCCATTGCACTAAACTTAAAGTGATTCCACCAAAACTCCTATCTAGCTGGGAAAAATTGGAGGTTCTGAGCATGGAAAACAGCTTTAACCAGTGGGAAGCCAAAGGATCGAGTGAATGTAATGTAAATGCAAGTCTTGTTGAGTTAAAGGACTTGCCAATCTCTTCTCTAGATATTTGTATTCCTGATCCCTCTATTTTGCCAGAGAATTTGTTCTCAGATAAGAAATTGAAGAGATACAGAATAATTATTGGAGAGAATTGGAGATGGGATTGCAATCACGAAACTTCAAAGACATTGAAACTTGAGCTAAATGAAAATGTCCATTCGAAGCATGGGGTTCAGAAGTTATTGGAAGGAGTTGAAGATTTGTATTTGTGTGGATCCAATGGTCTTGAACATGTTCTTCACAATAGATTTCCATATTTAAGGCATCTTCAGATTAAAAGTAATGACGATGTTGAATATATTGTTTTGAGCTCAACCCATCAAGAAGTTGCCCTCCCAATGCTTGAAACTTTGAACCTTGAAAAGTTGAATGTGCTAAAGAAGTTATGTCAAGGACCAATTGCGCCCACCTTCTTCCAAAACCTAAAAGTAATCAAAGTGAGTGGTTGTCAACAGTTGAAGTGGATTTTCTCAGCTTCAATGATTGGATCATTTTCGCAGCTTGTTGAGATTGAAATTAGAGATTGTGACTCTTTGAAAGAGGTAGTGACATCTGCTATTGAAGACTCATCTGATCAGCCAAAATTTGCTAATGACGTCATTGTTTTCAAGAAGTTACGCACTTTGAAGATGGAAAGATTGCCAGTTCTTATAGATTTCTACATGCAGGGTAGAGCAGCAAATAACCATTATAATACAGCTTCGAAATCACTCTTCAACAATAAGGTGTTATTTCAGATGTTGGAGCTATTGGAACTGTCAGATTTAGACAATTTGATTTCATCTATATGGAATGATCAGCCTTCCGACAGCTCGTTTAGTAACTTGAAAAGACTAGATGTGGATAGCTGTGGCTTTGTGGTGTTATTTCCGATGTTGGAGCGATTGGAACTGTCAGATTTAGACAATTTGACTTCATCTAGATGGAATGATCAGCTTTTTGACAGCTCAGTTAGTAACTTGAAAAGACTATTTGTGTGGTCGTGTGGCTTTGTGATATTAGTGCCCTTCCAAGTTCTAAGATCCTTGCATAGTTTGGAAGAACTAGAAGTGGAAGAGTGTGAGAAGTTGGAGGTGGTGTTTGATTTAGAAGATTTGAATGATTGTAAAGAGCCACAATCATCATCAGTGGTTGTGCCATTGAAGAAGTTACGACTATCTAGGTTGCCAAAACTGAAGAATGTGTGGGGCAAGCACCACCAAGAAAATGTCTCCTTCCAAAGTCTAAGGCAGATAGAAGTATTGTTTTGTGAAAGCCTAACGAGTGTGTTTCCTGCATCTATAGCCAGAGGCATGCTTCATTGTCTTGAACAACTTGTAGTTCGAAATTGTGCTGATATGGAAGTAATTGTTGCAAAGGATCAAGTTTCAGAATCTCTTGATGCTGCCTTTGTGCGTCCTAGGCTGACTTCCCTTGAGCTTTTTGACCTTCCAAATTTGAGGAACTTCTATGCACAAAGACACAAATTAGAATGGCCCAACGTTCAACAGTTAGAGACTGACGCTTGTGGTGAAATACAGATATTTGAAAAGGTCTCAAGTTCATCAGAAATACATGGGGAAGAGAGTACAATAGACTCAATATATCCTCTGCTCTCCTGCAACAAGGATGATCGATTCTTAGTCAACTTGTTTAGTAACTTGAAAGAACTATTTGTGGAGAGGTGTGGCTTTGTGATTTTAGTGCCCCTTCAACTTCTAAAATCCTTACATAGTTTGGAAGAACTAACAGTGAATAAGTGTGAGGAGTTGGAGGTGGTGTTTGATTTAGAAGACTTGAATGATTGTGAAAGAGACAATCATCATCAGTGGTTGTGCCATTGA 3894 0.3765 MDPATCFIEKLLEKLLDYTINALGRQVGYMIFYRNNIDELRSQMQDLNQKQEAMQHLIDEAIRNCERIELQVESWMSGVDDIKMQAEQFFNEEGQSQTRCSRTSCPNLCSCYQLSRRAKKMALKVKDLAKKKKDLNKVSHLPSPKCRHLIDDKMNEGLDSRLQIIDQVMEALRNSSINMVGLCGLGGIGKTTIAKEVAKKLENKKMFRKVIMVTISKDMNIVEIQRQIVEMLGMRLEEVNEEVRSSRLFDRLKQEENMLPILDDLWGELDFGKVGIPFIGDKNNNKKNEGCKILLTSRNKTLLSDVMKCEKIIGVGVLQEEEAQELFKRIAELSIESSNPGLMSIAGEIVQKCGGLPLAIVTAAKALRNKDQNIWEDALTRLRNPLRRNITGIKEVDQILRLSYDQLTKENQHIFLFSSMLSHDPLIQDLLMYSVGLGFLKHIENMEDARVGISAVVSKLKSLNLFLDSFSSQHFTIHDVIRDVALSIASNELCAFIWRHKRLNAWPEQNLLEGYKGICLEKSDIRDLPEELLAPRLEFFLLNSENRDLAIPDTFFKSTKDLKLLSFINVCFSSLPFLNSLKKLKTLCLHSCLLKDMTQVGSLKQLTTLSLAYSEIEHLPFELAMLTSLQMLNLAHCTKLKVIPPKLLSSWEKLEVLSMENSFNQWEAKGSSECNVNASLVELKDLPISSLDICIPDPSILPENLFSDKKLKRYRIIIGENWRWDCNHETSKTLKLELNENVHSKHGVQKLLEGVEDLYLCGSNGLEHVLHNRFPYLRHLQIKSNDDVEYIVLSSTHQEVALPMLETLNLEKLNVLKKLCQGPIAPTFFQNLKVIKVSGCQQLKWIFSASMIGSFSQLVEIEIRDCDSLKEVVTSAIEDSSDQPKFANDVIVFKKLRTLKMERLPVLIDFYMQGRAANNHYNTASKSLFNNKVLFQMLELLELSDLDNLISSIWNDQPSDSSFSNLKRLDVDSCGFVVLFPMLERLELSDLDNLTSSRWNDQLFDSSVSNLKRLFVWSCGFVILVPFQVLRSLHSLEELEVEECEKLEVVFDLEDLNDCKEPQSSSVVVPLKKLRLSRLPKLKNVWGKHHQENVSFQSLRQIEVLFCESLTSVFPASIARGMLHCLEQLVVRNCADMEVIVAKDQVSESLDAAFVRPRLTSLELFDLPNLRNFYAQRHKLEWPNVQQLETDACGEIQIFEKVSSSSEIHGEESTIDSIYPLLSCNKDDRFLVNLFSNLKELFVERCGFVILVPLQLLKSLHSLEELTVNKCEELEVVFDLEDLNDCERDNHHQWLCH 1297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2654 1297 SMART AAA_5 176 318 IPR003593 GO:0016887
Prci11g2654 1297 Pfam NB-ARC domain 164 405 IPR002182 GO:0043531
Prci11g2654 1297 SUPERFAMILY L domain-like 473 870 - -
Prci11g2654 1297 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 417 IPR027417 -
Prci11g2654 1297 PRINTS Disease resistance protein signature 624 640 - -
Prci11g2654 1297 PRINTS Disease resistance protein signature 353 367 - -
Prci11g2654 1297 PRINTS Disease resistance protein signature 252 266 - -
Prci11g2654 1297 PRINTS Disease resistance protein signature 179 194 - -
Prci11g2654 1297 Gene3D - 317 408 IPR042197 -
Prci11g2654 1297 Gene3D Ribonuclease Inhibitor 680 885 IPR032675 -
Prci11g2654 1297 SUPERFAMILY RNI-like 923 1274 - -
Prci11g2654 1297 Coils Coil 30 64 - -
Prci11g2654 1297 Gene3D Ribonuclease Inhibitor 916 1290 IPR032675 -
Prci11g2654 1297 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1036 1200 - -
Prci11g2654 1297 Gene3D - 152 316 IPR027417 -
Prci11g2654 1297 Gene3D Ribonuclease Inhibitor 488 679 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2654 Prci-Chr11 39252805 39265519 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2654 177 640 WRKY Transcription Factor Family AT5G45050 23.780 2.92e-08 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2654 - - pcin:129285257 1980.3