Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2646 ATGGATCCCGCTACTTGTTTTATTGAAAAGCTTCTAGAAAAGCTCCTAGAAAAGCTTCTGGATTATACAATAAATGCCTTGGGGTATATGATTTTCTATGGCGACAACATTAATAAGCTATGGAATCAAATAGCAGATCTCAATCCTACACAAGTATTTATCCAACATTCAATTGACGAGGCTAGAAGAAACGGTGAAAAAATTGAAGAGTTAGTTGAAGGATGGATGAGTGGAGTGGATGAGATAAAAACGCAAGCACAGCAGTTCTTAGATGAAGAAAGCCAAAATTTGTGTTCACGTTATCGGTTGAGTAGAAAAGCAATCGAAATGGCACGAAAAGTTGAAAAACTTGCAATCGTACACTTCAACAGAGTTTCATATCTTCCTTCTCCCAAATGTAGGCACTTAATAGATGACAAAATGAATGAAGGGCTTGATTCAAGGCTGCAAATTATAGATCAAGTTATGGAGGCATTGAGGAATTCGAGCGTAAACATGATCGGGTTGTGCGGACTTGGTGGCGTTGGCAAGACTACAATAGCTAAAGAGGTAGCAAAGAAGCTGGAGAATCAAAAGATGTTTGGAAAGGTGATCATGGTAACAATTTCGAAGGAGATGGATATTGTAAACATTCAAACCCATATTGCCGAGAAGTTGGGTATGAAACTCACAGAAAAAACTGTGGATGCAAGATCTTCTCGTCTATTTGATAGGTTGAAGCAAGAGAAGAATATGCTCCTAATATTGGATGATCTTTGGAAGGAACTAGATTTGGGAGAAGTTGGAATTCCCTTTATTGGGGACAAAAAGAATAACACAAAGAATGAAGGATGCAAACTCTTACTAACTTCAAGAAATAAAACACTACTTTCAGACCTAATGAAATGTGAAAAGATCATCAGAGTGGGTGTTCTGTCAGAGGATGAAGCACATGAGTTGTTCAAGAGGATTGCTGAACTTTCTATTGAATCAAGCAATCCTAATTTGATGTCTACAGCCACTGAGATTGTTCGAACATGTGGAGGCTTGCCGCTAGCAATTGTTGCAGCTGCAAAATTATTGAGGAATAAAGATCTGAGTATATGGGAAAATGTCCTTGCACGATTGAGAAATCCTTTACGGAGAAACTTCACAGGAATTAGAGAGGTCGATTCCATTTTGAAACTAAGCTATGATGATTTGAGCGCAGAGAACAAAAACATTTTCTTGCTTGCTGCCATGTTGCCTCATGACCCCTCAATTCAAGACTTGCTCATGTACTCCATCGGGTTAGATTTTCTCGAACACATCGAGAACATGGAAAATGCTCAAGTTGGAATATTTGATGCTGTAATCAAGCTAAGATCTTTGAATTTATTACTTGATAGCTTATCCAGTCGTCATTTTACAATGCATGACGTTGTTCGAGATTTGGCACTATCAGTTGCATCTAGTGACCTAGATGCATTCGTTGTGAGAGACAGAAGGTTAAATGCATGGCCAGATGAAAAAGATCAAAAAGACTTCAGGGGAATGTTCTTTGAAAAAAGTGACATTGGTGATCTTCCAGAGGAGTTACTTGCTCCAAGGTTAGAATTCTTCCTATTAAATAGTGAAAACCGTGATTTGGCCATACCGGACACCTTTTTCAAATCCACAAAAGATCTTAAACTGTTGAGTTTTATCAATGTGTGCTTTTCATCATTGCCATTTCTTAATTCTCTAAAAAAGCTCAAAACTTTATGCCTCCACTCTTGTTTGGTGAACGAGATGACTCAGGTTGGAAGCTTGAAGCAATTAACAACCTTGAGTCTTGCTTATTCTGAAATTGAACATTTGCCATTTGAATTGGCGATGTTGACTTCATTACAAATGCTAAATCTAGCCCATTGCACTAAACTTAAAGTGATTCCACCAAAACTCCTATCTAGCTGGGAAAAATTGGAGGTTCTGAGCATGGAAAACAGCTTTAACCAGTGGGAAGCCAAAGGATTAAGTGAAGGTAATGTAAATGCAAGTCTTGTTGAGTTAAAGGACTTGCCAATCTCTTCTCTAGATATTCATATGCGTGATCCCTCTATTTTTCCGGAGAACTTGTTTTTAGATATGAAATTGAAGAGATACAGAATAATAATTGGAAAGGATTGGAATTGGTATTGCAAATATGAAACTTCAAGGATGTTGAAACTTGAGCTAAATGAAAATATCCATTTGAAGCAGGGGGTTCAGAAGCTATTAGAAGGAGTTGAAGATTTGTATTTGTGTGGATCCAATGGACTTGAACATGTTCTTCAAAATAGATTTCCATGTTTAAGGCATCTTCAGATTGACAGTAATGATGATGTCGAATATATTGTTTTGAGCTTAACGCCTCAAGAAGTTGCCCTTCCAATGCTTGAAACTTTGAAACTGAAAAAGTTGAATGTGTTGAAGAAGTTATGTCGAGGACCAATTGTGCCCACCTTCTTCCAAAACCTAAAAGTAATCGAAGTGAGTGGCTGTCGAATGTTGAAGTGGATTTTCTCAGCTTCAATGATTGGATCATTTTCGCAGCTTGTTGAGATTAAAATTAAAGATTGTGACTCCTTGAAAAGGGTTGTGACTTCTGCGATTGAAGGCTCATCTGATCAGCCGAAATCTGCTAATGACGTCATTGTTTTCAAGAAGTTATGCACTTTGAAGATGGAGAAATTGCCAGCTCTTATAGATTTCTGCATAAAGGATAGAGCAGCAAATAACCATTGTAATACAACTTCGAAATCACTCTTCAACAATAAGGTGGTATTTTCGATGTTGGAGCTATTGGAACTGTCAAATTTAGACAATTTGACTTCATCTATATGGAATGATCAACTTTCCAACGGCTCTTTTAGTAACTTGAAAAAATTAGTTGTGGAGAGCTGTGGCTTTGTGGTATTAGTGCCCTTCCAAGTTCTAAGATCCTTACATAGTTTGGAAGAACTATGGGTGATAAGGTGTGAGAAGTTGGAAGTGGTGTTTGACTTAGAAGATTTGAATTACTGTGAAGAGGGACAGTCATTTGCAGTAGTTGTGCCATTGCAGAGGATAAGCTTATGGAGTTTGCCAAAATTGAAGAGTGTGGGGAGCAGTCACCACCAAGTAAATGCCTCCTTCCAAAGTCCAAGTCAGATTGATTCAAAATATTCTCTGCTCTCTTGCAACAAGGTGTTATTTCCGATGTTGGAGCTATTGGAACTGTCAAATTTAGACAATTTGACTTCATCTATATGGAATGATCAGCTTTCCGACAGCTCGTTTGGTAACTTGAAAAGACTACATGTAGGGAGCTGTGGCTTTGTGGTATTAGTGCCCTTCCAAGTTCTAAGATCCTTATATAGTTTGGAAGAACTGGTGGTGACAAAGTGTGAGAAGTTGGAGGTGGTGTTTGACTTAGAAGATTTGAATGACGGTAAAGAGATACAGTCATCTTCAGTAGTTGTGCCATTGAAGAAGTTAAGCTTACAGAGTTTGCCAAAACTGAAGATCGTGTGGGGCAATCACCACCAAGGAAATGTCTCCTTCCAAAGTCTAAGCCAGATTGAGTTAAAATATCCTCTGCTCTGTCGCAGCAAGGATGATCGATTTTCATACAACTTGTTTAGTAACTTAAAAGAGCTAGTTGTGGATGGGTGTGGCTTTGTGATATTAGTGCCCTTCCAAGTTCTAAGATCCTTACACAGTTTGGAAGAACTACAAGTGCAAGAGTGTGAGGAGTTGGAGGTGGTGTTTGATTTAGAAGATTGGAATGATTGTAAAGAGAGACAGTCATCTTCAGTGGTTGCACGATTGAAGAAGTTAAGACTATGTGAGTTGCCAAAACTGAAGAACGTGTGGAGCAATGACCACCAAGGAAATGTCTCCTTCCAAAGTCTAAAGCAGATAGAAGTTGATAATTGTGACAGCCTGACGAGTGTGTTTCCTGCATCTATAGCCAAAGGCATGCTTCATTGTCTCGAACAACTTGTAGTTCGAAAGTGTGCTGATATGGAAGTAATTGTTGCAAAGGATCAAGTTTCTGAATCTCTTGATTCTACATTTCTATTTCCTGGGCTGACTTCCCTTGAGCTTGCTTACCTTCCAAATTGA 4086 0.3852 MDPATCFIEKLLEKLLEKLLDYTINALGYMIFYGDNINKLWNQIADLNPTQVFIQHSIDEARRNGEKIEELVEGWMSGVDEIKTQAQQFLDEESQNLCSRYRLSRKAIEMARKVEKLAIVHFNRVSYLPSPKCRHLIDDKMNEGLDSRLQIIDQVMEALRNSSVNMIGLCGLGGVGKTTIAKEVAKKLENQKMFGKVIMVTISKEMDIVNIQTHIAEKLGMKLTEKTVDARSSRLFDRLKQEKNMLLILDDLWKELDLGEVGIPFIGDKKNNTKNEGCKLLLTSRNKTLLSDLMKCEKIIRVGVLSEDEAHELFKRIAELSIESSNPNLMSTATEIVRTCGGLPLAIVAAAKLLRNKDLSIWENVLARLRNPLRRNFTGIREVDSILKLSYDDLSAENKNIFLLAAMLPHDPSIQDLLMYSIGLDFLEHIENMENAQVGIFDAVIKLRSLNLLLDSLSSRHFTMHDVVRDLALSVASSDLDAFVVRDRRLNAWPDEKDQKDFRGMFFEKSDIGDLPEELLAPRLEFFLLNSENRDLAIPDTFFKSTKDLKLLSFINVCFSSLPFLNSLKKLKTLCLHSCLVNEMTQVGSLKQLTTLSLAYSEIEHLPFELAMLTSLQMLNLAHCTKLKVIPPKLLSSWEKLEVLSMENSFNQWEAKGLSEGNVNASLVELKDLPISSLDIHMRDPSIFPENLFLDMKLKRYRIIIGKDWNWYCKYETSRMLKLELNENIHLKQGVQKLLEGVEDLYLCGSNGLEHVLQNRFPCLRHLQIDSNDDVEYIVLSLTPQEVALPMLETLKLKKLNVLKKLCRGPIVPTFFQNLKVIEVSGCRMLKWIFSASMIGSFSQLVEIKIKDCDSLKRVVTSAIEGSSDQPKSANDVIVFKKLCTLKMEKLPALIDFCIKDRAANNHCNTTSKSLFNNKVVFSMLELLELSNLDNLTSSIWNDQLSNGSFSNLKKLVVESCGFVVLVPFQVLRSLHSLEELWVIRCEKLEVVFDLEDLNYCEEGQSFAVVVPLQRISLWSLPKLKSVGSSHHQVNASFQSPSQIDSKYSLLSCNKVLFPMLELLELSNLDNLTSSIWNDQLSDSSFGNLKRLHVGSCGFVVLVPFQVLRSLYSLEELVVTKCEKLEVVFDLEDLNDGKEIQSSSVVVPLKKLSLQSLPKLKIVWGNHHQGNVSFQSLSQIELKYPLLCRSKDDRFSYNLFSNLKELVVDGCGFVILVPFQVLRSLHSLEELQVQECEELEVVFDLEDWNDCKERQSSSVVARLKKLRLCELPKLKNVWSNDHQGNVSFQSLKQIEVDNCDSLTSVFPASIAKGMLHCLEQLVVRKCADMEVIVAKDQVSESLDSTFLFPGLTSLELAYLPN 1361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2646 1361 Gene3D Ribonuclease Inhibitor 713 867 IPR032675 -
Prci11g2646 1361 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 1195 1361 - -
Prci11g2646 1361 SUPERFAMILY L domain-like 460 989 - -
Prci11g2646 1361 SUPERFAMILY RNI-like 1056 1333 - -
Prci11g2646 1361 Gene3D Ribonuclease Inhibitor 879 1346 IPR032675 -
Prci11g2646 1361 Gene3D Ribonuclease Inhibitor 489 665 IPR032675 -
Prci11g2646 1361 SMART AAA_5 163 305 IPR003593 GO:0016887
Prci11g2646 1361 Gene3D - 304 395 IPR042197 -
Prci11g2646 1361 Pfam NB-ARC domain 151 393 IPR002182 GO:0043531
Prci11g2646 1361 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 403 IPR027417 -
Prci11g2646 1361 PRINTS Disease resistance protein signature 239 253 - -
Prci11g2646 1361 PRINTS Disease resistance protein signature 166 181 - -
Prci11g2646 1361 PRINTS Disease resistance protein signature 611 627 - -
Prci11g2646 1361 PRINTS Disease resistance protein signature 340 354 - -
Prci11g2646 1361 Gene3D - 139 303 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2646 Prci-Chr11 38849616 38870323 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2646 164 627 WRKY Transcription Factor Family AT5G45050 22.403 4.30e-10 62.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2646 - - pcin:129287166 2604.71