Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2610 ATGCAGGATCCTCATGTTGATGTTCTTTTTTTAAATATCTCTGCTAAAGTGCTGACAAATATGGCATTTGAGCCATTGGATTGGTTTTGTCAGCCAGTGGCAAATGGGTTATGGACAAAAGTGGTTCAGAATGCCTTTGGTGCTTATACTCCTTGTGCTGTTGATTCTCTTGTGATCATCATTTCGCATTTGATCCTTTTTGGCTTGTGCTTCTATCGAATATGGTTGATTAACAAGAATTTCAACGTCAAGAGATATTGTTTGAGGTCAAAGCTTTATAATTATGTTTTGGGGTTGTTAGCTGGCTATTGCACTGCAGAGCCATTATTCAGATTGGTTGTGGGCCTATCAGTTTTAAATTTAGATGGGCAGACTCGTCTTGCTCCATTTGAGATGGTTTCACTAATTGTTGAGGCTCTTGCTTGGTGCTCTATGCTGGTTCTGATTCTTGTTGAAACTAGAGTCTATGTCTATGAATTCCGATGGTTTGTCAGATTTGGTGTGGTTTATACTGTAGTGGGGGATGCTGTCATGTTCAATCTTGTATTTTCAGCAAAGGAATTCTACACGAGATCAATGTTATATTTATACATAAGCGAGCTTGCCATACAGGCTTTGTTTGGAATACTGTTGCTTGTGTATATTCCTAATTTAGATCCTTATCCTGGTTATGCTCCCATCCGAAGTGAATTGGTCACTGATATTGCATATGAAGAACTCCCAGGAGGAGAGCAAATATGTCCTGAGAGGCATAGCAACTTATTTTCAAAAATAACTTTTGCTTGGATGAATCCTATAATGAAGCTAGGATATCAAAGACCACTTACTGATAAAGATGTATGGAAATTGGATACATGGGATCGGACTGAGACTTTGAACAACAAGTTCCAAAGGTGTTGGAATGAGGAATCTCGGAAGTCTAGACCATGGCTATTAAGAGCATTAAATAGTAGCCTAGGAGGAAGGTTTTGGTGTGGAGGCTTTTGGAAGATTGGCTATGATGTTTCCCAATTTCTAGGGCCTCTTATATTGAACATGCTACTGCAGTCTATGCAAAGAGGTGACCAGGCGTCAATTGGCTATGTGTATGGCTTCTCAATATTTGTTGGAGTGGTTTTTGGAGTTTTATGTGAAGCTCAATATTTTCAGAATGTCATGCGCATTGGTTTTCAGCTTAGATCAACTTTGGTGGCAGCTGTGTTTCGCAAATCTTTAAGACTTACTCATGAAGCCCGAAAGCAATTTGCATCTGGAAAAATAACCAATTTGATGACTACTGATGCTGAGGCACTACAGCAAATATGTCAGTCACTTCATACTCTGTGGTCAGCTCCATTTCGTATCATTGTTGCGCTGGTTCTTCTATACCAACAACTTGGTGTTGCTTCCATTCTTGGCGCTTTAATGCTTGTTCTAATGTTTCCAGTACAGACTTTTATTATTAGTAGAATGCAAAAGTGGTCCAAGGAAGGGTTGCAGCGTACAGACAAGAGAATTGGTCTCATGAATGAAATTTTGGCTTCTATGGACACTGTAAAATGTTATGCATGGGAGAGTAGTTTCCAATCTAAAGTACAAGTTGTCAGAAATGATGAATTATCATGGTTCAAGAAGGCATTATTACTTGGCGCGTGTAATGGATTTATACTAAACAGCATCCCAGTTTTTGTAACTGTTATTTCATTTGGAGTGTTCACCTTGCTTGGAGGGGATTTAACACCTTCGAGAGCATTTACATCCCTTTCTTTGTTCGCTGTGTTACGGTTTCCCCTCTTCATGCTTCCTAATGTTATTACTCAGGTTGTTAATGCAAATGTATCCTTGAAGCGTCTGGAAGAGTTGCTCTTAGCAGAAGAACGGATTCTTATGCCTAATCCCCCTCTAGAGCCAGGATTACCAGCCATCTCAGTGAAGAATGGAAATTTTTCATGGGATGCAAAGGCTGGGAGGTCTACATTGTCTAATGTCAATTTGGATGTACCTGTTGGTTGCGTTGTTGCAATAGTTGGCAGTACTGGAGAAGGAAAGACATCGCTCATATCTGCTATGCTTGGGGAGCTTCCACCTACTGCAGATGCAACTGTTGTTATAAGAGGGACAGTTGCTTATGTACCACAAATTTCATGGATCTTTAACGCAACTGTGCGGGATAACATTTTATTTGGTTCTCCTTTTGACCCTGTGAGATATGAGAAGGCAATAGATGTGACTGAACTGCAGCATGACCTCGAGTTGCTTCCTGGTGGTGACCTTACTGAAATTGGTGAAAGAGGGGTGAATATCAGTGGTGGTCAAAAACAAAGGGTATCCATGGCTAGAGCTGTCTACTCCGATTCAGACGTGTACATATTTGATGATCCTTTAAGTGCCCTGGATGCGCATGTTGCAAGACAGGTGTTTGATAAATGCATCAAAGGGGAATTGAGAGGAAAAACTCGAGTTCTTGTTACAAATCAGCTACATTTCCTTTCACAGGTCGATAGAATTATACTGGTCCATGATGGTATGGTAAAAGAAGAGGGAACATTTGAGGATCTCTCTAACCATGGACCACTGTTCCAAAAGCTTATGGAAAATGCTGGAAAGATGGAGGAGTATGCAGAAGAAAACACAGACAGTGAAAGTATGCAAAAGTCTTCTTCAAAATCAGTTCCCAACGGAATGCCTAATGATATGGCAAAAAGTGAAATTAAATCAAAAGAAGCCAAATCTGTTCTTATTAAACAAGAAGAACGAGAAACAGGTGTTGTCAGTTGGAAAGTTCTACAGAGGTACAAGAATGCATTGGGAGGATTTTGGGTGGTGCTAGTACTCTTTGCATGCTATATCTTAACTGAAGTGTTGCGAGTTTCCAGTAGCACATGGTTAAGCCATTGGACTGATCAGAGTGCATCAGAGGGTTATAGTCCTGGTTACTACAATCTGATATATGCAAGCCTGTCATTTTGTCAGATTTTGGTGACTTTAACAAATTCTTATTGGCTAATCATATCAAGTCTTTATGCTGCTAGAAGGTTGCACAATGCCATGCTCCACTCTATTTTACGGGCTCCTATGGCTTTTTTTCATACCAATCCTCTTGGGAGGATCATCAATAGGTTTGCAAAGGATCTAGGTGATATAGACCGGAATGTTGCTCCTTTTGTGAATATGTTTTTGGGCCAGGTTTCCCAGCTTCTTTCAACATTCATCTTGATAGGGATTGTTAGCACAATGTCCTTGTGGGCAATAATGCCATTATTGGTGTTGTTTTATGGAGCCTATCTATATTATCAGAGCACAGCCCGTGAAGTGAAGCGCTTAGATTCTATCAGCAGATCACCTGTATATGCTCAATTTGGAGAAGCACTTAATGGTCTATCAACTATCCGTGCTTACAAAGCTTATGATCGAATGGCTGACATTAATGGAAAAGCCATGGACAATAATATACGATTCACTCTTGTGAACATGAGTGGTAACCGATGGCTTGCAATTCGTCTGGAAACTTTGGGTGGCCTTATGATATGGTTTACTGCATCTTTTGCTGTATTGCAAAATGGGAGGGCTGAGAACCAGCAGGCATTTGCTTCCACAATGGGGCTACTGCTTAGTTATGCTTTAAATATTACTAGTTTGCTCACTGCGGTGCTCAGACTTGCAAGTCTGGCTGAGAATAGTTTAAATGCAGTTGAGCGTGTGGGTTCTTATATTGATTTGCCTTCAGAGGCTCCATCTATCATTGAGAGTAATCGTCCTCCTCCTGGTTGGCCATCATCTGGATCAATTAGATTCGAAGATGTTGTTCTTCGATATAGGCCAGAACTTCCACCTGTCTTACATGGATTGTCTTTCACAATTTTTCCAAGTGACAAGGTTGGCATTGTCGGGAGGACAGGAGCAGGAAAAACTAGCATGTTTAATGCTTTATTTCGACTCGTAGAGTTAGAAAGAGGAAAAATCTTAATTGATGACTGTGAAATTGCTAAGTTTGGACTGACTGATTTACGTAAAGTTCTTGGAATTATCCCACAGTCACCTGTTCTCTTTTCAGGAAGTGTGAGATTTAATCTTGATCCTTTTAATGAGCATAATGATGCTGACCTTTGGGAGGCTCTGGAGAGAGCACATTTGAAGGATGTGATTCGGAGGAATTCATTGGGGCTTGAAGCTGAGGTATCTGAGGGAGGAGAAAATTTCAGCGTTGGACAGAGGCAACTATTGAGTCTTGCTCGTGCATTATTGCGGAGATCAAAGATATTGGTACTTGATGAGGCAACTGCAGCGGTTGATGTCAGAACTGATGCACTGATACAGAAAACAATTCGAGAAGAGTTTAAATCCTGTACCATGCTCATTATAGCTCATCGACTTAATACCATTATTGACTGCGATCGGATCCTTCTACTTGATGGTGGGCAGCTCCGTGAATATGGGACCCCTGAGGAGCTACTGTCAGACAACGATAGTGCTTTCTCAAAGATGGTACTAAGTACTGGAGCTGCCAATGCTCAATATTTACGCAGCTTAGTGCTCAATGGGGATGGTGGAAACAAGCCAGTGCAAGAGGGGAAGCACCTCGATGGACAGCGAAGATGGCTAGCTTCCTCTCGCTGGGCAGCTGCAGCGCAATTTGCCCTTGCTGTCAGCCTGACCTCATCCCAGAATGACCTTCGCCAATTGGAAATTGAAGATGACAACAGTATTCTCAAGACAGCCAAGGATGCCGTTATAACGTTGCAGGGAATTTTGGATGGAAAGCATGATAAAGAAATTGAGGAATCTTTAGATCAACACCAGATATCACCTAACAGATGGTGGTCATCCCTTTTCAAGATGATTGAGGGTCTGGCTATGTTGAGCAGATTAGCCCGGAATAGGCTGCACCAATCTGACTACAATTTTGAAGACACGTCAATAAATTTTGACCATGTTGATATGTAG 4923 0.4124 MQDPHVDVLFLNISAKVLTNMAFEPLDWFCQPVANGLWTKVVQNAFGAYTPCAVDSLVIIISHLILFGLCFYRIWLINKNFNVKRYCLRSKLYNYVLGLLAGYCTAEPLFRLVVGLSVLNLDGQTRLAPFEMVSLIVEALAWCSMLVLILVETRVYVYEFRWFVRFGVVYTVVGDAVMFNLVFSAKEFYTRSMLYLYISELAIQALFGILLLVYIPNLDPYPGYAPIRSELVTDIAYEELPGGEQICPERHSNLFSKITFAWMNPIMKLGYQRPLTDKDVWKLDTWDRTETLNNKFQRCWNEESRKSRPWLLRALNSSLGGRFWCGGFWKIGYDVSQFLGPLILNMLLQSMQRGDQASIGYVYGFSIFVGVVFGVLCEAQYFQNVMRIGFQLRSTLVAAVFRKSLRLTHEARKQFASGKITNLMTTDAEALQQICQSLHTLWSAPFRIIVALVLLYQQLGVASILGALMLVLMFPVQTFIISRMQKWSKEGLQRTDKRIGLMNEILASMDTVKCYAWESSFQSKVQVVRNDELSWFKKALLLGACNGFILNSIPVFVTVISFGVFTLLGGDLTPSRAFTSLSLFAVLRFPLFMLPNVITQVVNANVSLKRLEELLLAEERILMPNPPLEPGLPAISVKNGNFSWDAKAGRSTLSNVNLDVPVGCVVAIVGSTGEGKTSLISAMLGELPPTADATVVIRGTVAYVPQISWIFNATVRDNILFGSPFDPVRYEKAIDVTELQHDLELLPGGDLTEIGERGVNISGGQKQRVSMARAVYSDSDVYIFDDPLSALDAHVARQVFDKCIKGELRGKTRVLVTNQLHFLSQVDRIILVHDGMVKEEGTFEDLSNHGPLFQKLMENAGKMEEYAEENTDSESMQKSSSKSVPNGMPNDMAKSEIKSKEAKSVLIKQEERETGVVSWKVLQRYKNALGGFWVVLVLFACYILTEVLRVSSSTWLSHWTDQSASEGYSPGYYNLIYASLSFCQILVTLTNSYWLIISSLYAARRLHNAMLHSILRAPMAFFHTNPLGRIINRFAKDLGDIDRNVAPFVNMFLGQVSQLLSTFILIGIVSTMSLWAIMPLLVLFYGAYLYYQSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKAMDNNIRFTLVNMSGNRWLAIRLETLGGLMIWFTASFAVLQNGRAENQQAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGSYIDLPSEAPSIIESNRPPPGWPSSGSIRFEDVVLRYRPELPPVLHGLSFTIFPSDKVGIVGRTGAGKTSMFNALFRLVELERGKILIDDCEIAKFGLTDLRKVLGIIPQSPVLFSGSVRFNLDPFNEHNDADLWEALERAHLKDVIRRNSLGLEAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDGGQLREYGTPEELLSDNDSAFSKMVLSTGAANAQYLRSLVLNGDGGNKPVQEGKHLDGQRRWLASSRWAAAAQFALAVSLTSSQNDLRQLEIEDDNSILKTAKDAVITLQGILDGKHDKEIEESLDQHQISPNRWWSSLFKMIEGLAMLSRLARNRLHQSDYNFEDTSINFDHVDM 1640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2610 1640 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1256 1490 IPR003439 GO:0005524
Prci11g2610 1640 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 632 858 IPR027417 -
Prci11g2610 1640 FunFam Multidrug resistance-associated protein member 4 1240 1492 - -
Prci11g2610 1640 Gene3D - 630 885 IPR027417 -
Prci11g2610 1640 ProSitePatterns ABC transporters family signature. 1393 1407 IPR017871 GO:0005524|GO:0016887
Prci11g2610 1640 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 936 1219 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci11g2610 1640 CDD ABCC_MRP_domain2 1254 1474 - -
Prci11g2610 1640 CDD ABC_6TM_ABCC_D1 325 610 IPR044746 GO:0140359
Prci11g2610 1640 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 637 859 IPR003439 GO:0005524
Prci11g2610 1640 MobiDBLite consensus disorder prediction 865 894 - -
Prci11g2610 1640 Pfam ABC transporter transmembrane region 936 1194 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci11g2610 1640 Pfam ABC transporter transmembrane region 326 591 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci11g2610 1640 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 326 603 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci11g2610 1640 SMART AAA_5 1282 1466 IPR003593 GO:0016887
Prci11g2610 1640 SMART AAA_5 662 837 IPR003593 GO:0016887
Prci11g2610 1640 SUPERFAMILY ABC transporter transmembrane region 309 615 IPR036640 GO:0005524|GO:0016020
Prci11g2610 1640 CDD ABC_6TM_ABCC_D2 935 1231 IPR044726 GO:0140359
Prci11g2610 1640 MobiDBLite consensus disorder prediction 873 888 - -
Prci11g2610 1640 FunFam ABC transporter C family member 2 299 620 - -
Prci11g2610 1640 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 249 1496 - -
Prci11g2610 1640 SUPERFAMILY ABC transporter transmembrane region 932 1236 IPR036640 GO:0005524|GO:0016020
Prci11g2610 1640 Gene3D ABC transporter type 1, transmembrane domain 896 1237 IPR036640 GO:0005524|GO:0016020
Prci11g2610 1640 Gene3D ABC transporter type 1, transmembrane domain 294 621 IPR036640 GO:0005524|GO:0016020
Prci11g2610 1640 CDD ABCC_MRP_domain1 635 835 - -
Prci11g2610 1640 Gene3D - 1239 1493 IPR027417 -
Prci11g2610 1640 Pfam ABC transporter 1273 1421 IPR003439 GO:0005524
Prci11g2610 1640 Pfam ABC transporter 653 788 IPR003439 GO:0005524
Prci11g2610 1640 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1246 1482 IPR027417 -
Prci11g2610 1640 ProSitePatterns ABC transporters family signature. 761 775 IPR017871 GO:0005524|GO:0016887
Prci11g2610 1640 FunFam ABC transporter C family member 2 629 875 - -
Prci11g2610 1640 FunFam ABC transporter C family member 2 899 1237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2610 Prci-Chr11 37797679 37863254 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2610 615 851 Calmodulin-binding Proteins AT2G36910 27.843 1.40e-23 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2610 - - gmx:100795004 2709.86