Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2609 ATGCAGGATCCTCATGTTGATGTTCTTTTTTTAAATATCTCTGCTAAAGTGCTGACAAATATGGCATTTGAGCCATTGGATTGGTTTTGTCAGCCAGTGGCAAATGGGTTATGGACAAAAGTGGTTCAGAATGCCTTTGGTGCTTATACTCCTTGTGCTGTTGATTCTCTTGTGATCATCATTTCGCATTTGATCCTTTTTGGCTTGTGCTTCTATCGAATATGGTTGATTAACAAGAATTTCAACGTCAAGAGATATTGTTTGAGGTCAAAGCTTTATAATTATGTTTTGGGGTTGTTAGCTGGCTATTGCACTGCAGAGCCATTATTCAGATTGGTTGTGGGCCTATCAGTTTTAAATTTAGATGGGCAGACTCGTCTTGCTCCATTTGAGATGGTTTCACTAATTGTTGAGGCTCTTGCTTGGTGCTCTATGCTGGTTCTGATTCTTGTTGAAACTAGAGTCTATGTCTATGAATTCCGATGGTTTGTCAGATTTGGTGTGGTTTATACTGTAGTGGGGGATGCTGTCATGTTCAATCTTGTATTTTCAGCAAAGGAATTCTACACGAGATCAATGTTATATTTATACATAAGCGAGCTTGCCATACAGGCTTTGTTTGGAATACTGTTGCTTGTGTATATTCCTAATTTAGATCCTTATCCTGGTTATGCTCCCATCCGAAGTGAATTGGTCACTGATATTGCATATGAAGAACTCCCAGGAGGAGAGCAAATATGTCCTGAGAGGCATAGCAACTTATTTTCAAAAATAACTTTTGCTTGGATGAATCCTATAATGAAGCTAGGATATCAAAGACCACTTACTGATAAAGATGTATGGAAATTGGATACATGGGATCGGACTGAGACTTTGAACAACAAGTTTTGGTGTGGAGGCTTTTGGAAGATTGGCTATGATGTTTCCCAATTTCTAGGGCCTCTTATATTGAACATGCTACTGCAGTCTATGCAAAGAGGTGACCAGGCGTCAATTGGCTATGTGTATGGCTTCTCAATATTTGTTGGAGTGGTTTTTGGAGTTTTATGTGAAGCTCAATATTTTCAGAATGTCATGCGCATTGGTTTTCAGCTTAGATCAACTTTGGTGGCAGCTGTGTTTCGCAAATCTTTAAGACTTACTCATGAAGCCCGAAAGCAATTTGCATCTGGAAAAATAACCAATTTGATGACTACTGATGCTGAGGCACTACAGCAAATATGTCAGTCACTTCATACTCTGTGGTCAGCTCCATTTCGTATCATTGTTGCGCTGGTTCTTCTATACCAACAACTTGGTGTTGCTTCCATTCTTGGCGCTTTAATGCTTGTTCTAATGTTTCCAGTACAGACTTTTATTATTAGTAGAATGCAAAAGTGGTCCAAGGAAGGGTTGCAGCGTACAGACAAGAGAATTGGTCTCATGAATGAAATTTTGGCTTCTATGGACACTGTAAAATGTTATGCATGGGAGAGTAGTTTCCAATCTAAAGTACAAGTTGTCAGAAATGATGAATTATCATGGTTCAAGAAGGCATTATTACTTGGCGCGTGTAATGGATTTATACTAAACAGCATCCCAGTTTTTGTAACTGTTATTTCATTTGGAGTGTTCACCTTGCTTGGAGGGGATTTAACACCTTCGAGAGCATTTACATCCCTTTCTTTGTTCGCTGTGTTACGGTTTCCCCTCTTCATGCTTCCTAATGTTATTACTCAGGTTGTTAATGCAAATGTATCCTTGAAGCGTCTGGAAGAGTTGCTCTTAGCAGAAGAACGGATTCTTATGCCTAATCCCCCTCTAGAGCCAGGATTACCAGCCATCTCAGTGAAGAATGGAAATTTTTCATGGGATGCAAAGGCTGGGAGGTCTACATTGTCTAATGTCAATTTGGATGTACCTGTTGGTTGCGTTGTTGCAATAGTTGGCAGTACTGGAGAAGGAAAGACATCGCTCATATCTGCTATGCTTGGGGAGCTTCCACCTACTGCAGATGCAACTGTTGTTATAAGAGGGACAGTTGCTTATGTACCACAAATTTCATGGATCTTTAACGCAACTGTGCGGGATAACATTTTATTTGGTTCTCCTTTTGACCCTGTGAGATATGAGAAGGCAATAGATGTGACTGAACTGCAGCATGACCTCGAGTTGCTTCCTGGTGGTGACCTTACTGAAATTGGTGAAAGAGGGGTGAATATCAGTGGTGGTCAAAAACAAAGGGTATCCATGGCTAGAGCTGTCTACTCCGATTCAGACGTGTACATATTTGATGATCCTTTAAGTGCCCTGGATGCGCATGTTGCAAGACAGGTGTTTGATAAATGCATCAAAGGGGAATTGAGAGGAAAAACTCGAGTTCTTGTTACAAATCAGCTACATTTCCTTTCACAGGTCGATAGAATTATACTGGTCCATGATGGTATGGTAAAAGAAGAGGGAACATTTGAGGATCTCTCTAACCATGGACCACTGTTCCAAAAGCTTATGGAAAATGCTGGAAAGATGGAGGAGTATGCAGAAGAAAACACAGACAGTGAAAGTATGCAAAAGTCTTCTTCAAAATCAGTTCCCAACGGAATGCCTAATGATATGGCAAAAAGTGAAATTAAATCAAAAGAAGCCAAATCTGTTCTTATTAAACAAGAAGAACGAGAAACAGGTGTTGTCAGTTGGAAAGTTCTACAGAGGTACAAGAATGCATTGGGAGGATTTTGGGTGGTGCTAGTACTCTTTGCATGCTATATCTTAACTGAAGTGTTGCGAGTTTCCAGTAGCACATGGTTAAGCCATTGGACTGATCAGAGTGCATCAGAGGGTTATAGTCCTGGTTACTACAATCTGATATATGCAAGCCTGTCATTTTGTCAGATTTTGGTGACTTTAACAAATTCTTATTGGCTAATCATATCAAGTCTTTATGCTGCTAGAAGGTTGCACAATGCCATGCTCCACTCTATTTTACGGGCTCCTATGGCTTTTTTTCATACCAATCCTCTTGGGAGGATCATCAATAGGTTTGCAAAGGATCTAGGTGATATAGACCGGAATGTTGCTCCTTTTGTGAATATGTTTTTGGGCCAGGTTTCCCAGCTTCTTTCAACATTCATCTTGATAGGGATTGTTAGCACAATGTCCTTGTGGGCAATAATGCCATTATTGGTGTTGTTTTATGGAGCCTATCTATATTATCAGAGCACAGCCCGTGAAGTGAAGCGCTTAGATTCTATCAGCAGATCACCTGTATATGCTCAATTTGGAGAAGCACTTAATGGTCTATCAACTATCCGTGCTTACAAAGCTTATGATCGAATGGCTGACATTAATGGAAAAGCCATGGACAATAATATACGATTCACTCTTGTGAACATGAGTGGTAACCGATGGCTTGCAATTCGTCTGGAAACTTTGGGTGGCCTTATGATATGGTTTACTGCATCTTTTGCTGTATTGCAAAATGGGAGGGCTGAGAACCAGCAGGCATTTGCTTCCACAATGGGGCTACTGCTTAGTTATGCTTTAAATATTACTAGTTTGCTCACTGCGGTGCTCAGACTTGCAAGTCTGGCTGAGAATAGTTTAAATGCAGTTGAGCGTGTGGGTTCTTATATTGATTTGCCTTCAGAGGCTCCATCTATCATTGAGAGTAATCGTCCTCCTCCTGGTTGGCCATCATCTGGATCAATTAGATTCGAAGATGTTGTTCTTCGATATAGGCCAGAACTTCCACCTGTCTTACATGGATTGTCTTTCACAATTTTTCCAAGTGACAAGGTTGGCATTGTCGGGAGGACAGGAGCAGGAAAAACTAGCATGTTTAATGCTTTATTTCGACTCGTAGAGTTAGAAAGAGGAAAAATCTTAATTGATGACTGTGAAATTGCTAAGTTTGGACTGACTGATTTACGTAAAGTTCTTGGAATTATCCCACAGTCACCTGTTCTCTTTTCAGGAAGTGTGAGATTTAATCTTGATCCTTTTAATGAGCATAATGATGCTGACCTTTGGGAGGCTCTGGAGAGAGCACATTTGAAGGATGTGATTCGGAGGAATTCATTGGGGCTTGAAGCTGAGGTATCTGAGGGAGGAGAAAATTTCAGCGTTGGACAGAGGCAACTATTGAGTCTTGCTCGTGCATTATTGCGGAGATCAAAGATATTGGTACTTGATGAGGCAACTGCAGCGGTTGATGTCAGAACTGATGCACTGATACAGAAAACAATTCGAGAAGAGTTTAAATCCTGTACCATGCTCATTATAGCTCATCGACTTAATACCATTATTGACTGCGATCGGATCCTTCTACTTGATGGTGGGCAGCTCCGTGAATATGGGACCCCTGAGGAGCTACTGTCAGACAACGATAGTGCTTTCTCAAAGATGGTACTAAGTACTGGAGCTGCCAATGCTCAATATTTACGCAGCTTAGTGCTCAATGGGGATGGTGGAAACAAGCCAGTGCAAGAGGGGAAGCACCTCGATGGACAGCGAAGATGGCTAGCTTCCTCTCGCTGGGCAGCTGCAGCGCAATTTGCCCTTGCTGTCAGCCTGACCTCATCCCAGAATGACCTTCGCCAATTGGAAATTGAAGATGACAACAGTATTCTCAAGACAGCCAAGGATGCCGTTATAACGTTGCAGGGAATTTTGGATGGAAAGCATGATAAAGAAATTGAGGAATCTTTAGATCAACACCAGATATCACCTAACAGATGGTGGTCATCCCTTTTCAAGATGATTGAGGGTCTGGCTATGTTGAGCAGATTAGCCCGGAATAGGCTGCACCAATCTGACTACAATTTTGAAGACACGTCAATAAATTTTGACCATGTTGATATGTAG 4842 0.412 MQDPHVDVLFLNISAKVLTNMAFEPLDWFCQPVANGLWTKVVQNAFGAYTPCAVDSLVIIISHLILFGLCFYRIWLINKNFNVKRYCLRSKLYNYVLGLLAGYCTAEPLFRLVVGLSVLNLDGQTRLAPFEMVSLIVEALAWCSMLVLILVETRVYVYEFRWFVRFGVVYTVVGDAVMFNLVFSAKEFYTRSMLYLYISELAIQALFGILLLVYIPNLDPYPGYAPIRSELVTDIAYEELPGGEQICPERHSNLFSKITFAWMNPIMKLGYQRPLTDKDVWKLDTWDRTETLNNKFWCGGFWKIGYDVSQFLGPLILNMLLQSMQRGDQASIGYVYGFSIFVGVVFGVLCEAQYFQNVMRIGFQLRSTLVAAVFRKSLRLTHEARKQFASGKITNLMTTDAEALQQICQSLHTLWSAPFRIIVALVLLYQQLGVASILGALMLVLMFPVQTFIISRMQKWSKEGLQRTDKRIGLMNEILASMDTVKCYAWESSFQSKVQVVRNDELSWFKKALLLGACNGFILNSIPVFVTVISFGVFTLLGGDLTPSRAFTSLSLFAVLRFPLFMLPNVITQVVNANVSLKRLEELLLAEERILMPNPPLEPGLPAISVKNGNFSWDAKAGRSTLSNVNLDVPVGCVVAIVGSTGEGKTSLISAMLGELPPTADATVVIRGTVAYVPQISWIFNATVRDNILFGSPFDPVRYEKAIDVTELQHDLELLPGGDLTEIGERGVNISGGQKQRVSMARAVYSDSDVYIFDDPLSALDAHVARQVFDKCIKGELRGKTRVLVTNQLHFLSQVDRIILVHDGMVKEEGTFEDLSNHGPLFQKLMENAGKMEEYAEENTDSESMQKSSSKSVPNGMPNDMAKSEIKSKEAKSVLIKQEERETGVVSWKVLQRYKNALGGFWVVLVLFACYILTEVLRVSSSTWLSHWTDQSASEGYSPGYYNLIYASLSFCQILVTLTNSYWLIISSLYAARRLHNAMLHSILRAPMAFFHTNPLGRIINRFAKDLGDIDRNVAPFVNMFLGQVSQLLSTFILIGIVSTMSLWAIMPLLVLFYGAYLYYQSTAREVKRLDSISRSPVYAQFGEALNGLSTIRAYKAYDRMADINGKAMDNNIRFTLVNMSGNRWLAIRLETLGGLMIWFTASFAVLQNGRAENQQAFASTMGLLLSYALNITSLLTAVLRLASLAENSLNAVERVGSYIDLPSEAPSIIESNRPPPGWPSSGSIRFEDVVLRYRPELPPVLHGLSFTIFPSDKVGIVGRTGAGKTSMFNALFRLVELERGKILIDDCEIAKFGLTDLRKVLGIIPQSPVLFSGSVRFNLDPFNEHNDADLWEALERAHLKDVIRRNSLGLEAEVSEGGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRILLLDGGQLREYGTPEELLSDNDSAFSKMVLSTGAANAQYLRSLVLNGDGGNKPVQEGKHLDGQRRWLASSRWAAAAQFALAVSLTSSQNDLRQLEIEDDNSILKTAKDAVITLQGILDGKHDKEIEESLDQHQISPNRWWSSLFKMIEGLAMLSRLARNRLHQSDYNFEDTSINFDHVDM 1613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2609 1613 Gene3D ABC transporter type 1, transmembrane domain 292 594 IPR036640 GO:0005524|GO:0016020
Prci11g2609 1613 Gene3D ABC transporter type 1, transmembrane domain 869 1210 IPR036640 GO:0005524|GO:0016020
Prci11g2609 1613 FunFam Multidrug resistance-associated protein member 4 1213 1465 - -
Prci11g2609 1613 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1219 1455 IPR027417 -
Prci11g2609 1613 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 610 832 IPR003439 GO:0005524
Prci11g2609 1613 ProSitePatterns ABC transporters family signature. 1366 1380 IPR017871 GO:0005524|GO:0016887
Prci11g2609 1613 CDD ABC_6TM_ABCC_D2 908 1204 IPR044726 GO:0140359
Prci11g2609 1613 CDD ABC_6TM_ABCC_D1 298 583 IPR044746 GO:0140359
Prci11g2609 1613 FunFam ABC transporter C family member 2 872 1210 - -
Prci11g2609 1613 FunFam ABC transporter C family member 2 602 848 - -
Prci11g2609 1613 Gene3D - 1212 1466 IPR027417 -
Prci11g2609 1613 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1229 1463 IPR003439 GO:0005524
Prci11g2609 1613 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 249 1469 - -
Prci11g2609 1613 Pfam ABC transporter 1246 1394 IPR003439 GO:0005524
Prci11g2609 1613 ProSitePatterns ABC transporters family signature. 734 748 IPR017871 GO:0005524|GO:0016887
Prci11g2609 1613 CDD ABCC_MRP_domain1 608 808 - -
Prci11g2609 1613 FunFam ABC transporter C family member 2 285 593 - -
Prci11g2609 1613 SUPERFAMILY ABC transporter transmembrane region 905 1209 IPR036640 GO:0005524|GO:0016020
Prci11g2609 1613 MobiDBLite consensus disorder prediction 846 861 - -
Prci11g2609 1613 Pfam ABC transporter 626 761 IPR003439 GO:0005524
Prci11g2609 1613 SUPERFAMILY ABC transporter transmembrane region 296 588 IPR036640 GO:0005524|GO:0016020
Prci11g2609 1613 MobiDBLite consensus disorder prediction 838 867 - -
Prci11g2609 1613 SMART AAA_5 635 810 IPR003593 GO:0016887
Prci11g2609 1613 SMART AAA_5 1255 1439 IPR003593 GO:0016887
Prci11g2609 1613 Pfam ABC transporter transmembrane region 299 564 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci11g2609 1613 Pfam ABC transporter transmembrane region 909 1167 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci11g2609 1613 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 909 1192 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci11g2609 1613 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 605 831 IPR027417 -
Prci11g2609 1613 Gene3D - 603 858 IPR027417 -
Prci11g2609 1613 CDD ABCC_MRP_domain2 1227 1447 - -
Prci11g2609 1613 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 299 576 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2609 Prci-Chr11 37797679 37863254 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2609 588 824 Calmodulin-binding Proteins AT2G36910 27.843 1.30e-23 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2609 - - gmx:100795004 2646.69