Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2601 ATGGGCTTGCATGTCCGAATCTTTGTCATGGTGATGATAGCTTTCACAGGAATCTTTTGTACTGGAGATACTGACTTGCTTGACGCAATCAATAGCTTATATGCGGCTCTGGGCTTACCGCCTCTTCAAGGTTGGAAAACTACTGGGGGAGATCCATGTGCAGAACTGTGGCAAGGCGTGGCTTGTGTCTTCTCCAACATAACTCAATTAAGTCTCAGAGGCATGAATTTGGGTGGAGAGCTGGGCAGTAACTTAAATTTTCCCTCCATCATTGAAATAGATCTTAGCAACAACCACATTGGAGGGCCTATTCCATCCACGCTACCCCCTACATTGAGGAACTTGTCTCTTTCAGGGAATCAGTTAAATGGAAGTATTCCAGATGCCTTATCCTCTCTAACACAACTGTTAGATTTGTCATTAAGTAACAACCTTCTAGATGGACAAATCCCTGATGTGTTTCAGCAGCTTACTGTCCTGATAAACATAGACCTGTCAGCTAACAACTTGAGTGGTCAGCTACCGCCCTCAATGGGAAATTTGTCATCACTTTCAACATTACACTTGCAGAACAATGAACTTTCTGGGTTTCTTAATGTTTTGCAAGACCTTCCTCTTCAGGATTTGAATATAGAGAACAATTTATTCTTTGGGCCAATTCCTCCACAATTGTTGAGTATCCCAAATCTCAGAAAAGATGGAAATCCATTTAATACTACTGCCATGCCATCACCTCCAGCTGCAGCCCCAGCTCCTGTAGCTATGGCTCCATCACCTATCCAAGCACCTTGGAATGTGGCAAATAGTCCATTTACCGTGGATGCACCAATGCCTGCAAGTGCTAGGAAGTCCTTTATATCTAAGAATGTCAGTTGGATTGCCATTGCTGGGTTTTTGGTATTTATTACACTAGGAGTTTGTCTATTTATGTTGTGGTGCTTTAAGAGAAGACCAGAAAACAAAAATGGTATAAAAAGTGATGTAGGTGTGGACACAATATCATTACATAAACATCAATACACTGACTCTTTGGAGAAAGCATCTGGGAAATCAATAAAATCACTTGGATACGGAGAACAGAATAGAAGAACAAATATGATTCTAAATGTTCAGGATGAGCAGGAAATACATGTGAACAAAGTATCAGCAGGTTCCAAACTTGCAACATTGCGGCCACCACCATCTCCTCTTCCAATCAATCTTGGTGAAAAGGACTTGATGAAACGAGCCATACCTACCAAAGTAACTGAGAGACAAGTTATGACAAGTTTTTTGCAAGTTTATACTATTGCATCACTTCAGCAGTATGCAAATAGTTTTTCCCAAGAAAATTATATTGGTGAAGGCACGCTTGGTGTCGTTTATCAGGCTGAGCTCCCTGATGGAAAGCAACTGGCAGTGAAGAAACTGGATGCTACTTCTTCTATAGGACATGAACAATTTCTTCAATTAGTGTGCAATATTTCCAAAATTCAACATGCCAACATTGTGAAGCTTATGGGATACTGTGCTGAGAATGGTCAACAATTTCTTGTATATGATTATTTCAGCAACAGAACTCTTCATGATGCATTGCATAAAGATAATGAACTCCATGCTAAACTGTCATGGAATGCACGCATTCGTGTGGCACTTGGAGCTGCAAGTGCTTTAGAGTATCTGCATGAGAACCTCCAGCCGCCTGTTGTGCATCAAAATTTTAAATCAGCTAATGTTCTCTTGAATACTGAGCTTGAAGCACATGTCTGTGATTGTGGATTCGGTCCTTTACTGTCTTCTGGATCTGCTGGTCAGTTGTCAGGACGCCTCCTCACAGCGTATGGCTATGGTGCGCCAGAACTTGAATCAGGAAGTTATACAAAGCAGAGTGATGTCTTTAGTTTTGGAGTTGTAATGCTTGAACTCCTCACTGGGCGAAAATCCTGTGACAGGTCACGACCTCATGGTGAGCAATTTCTGGTCAGATGGGCAGTTCCTCAACTGCATGACATTGATGCTTTAACAAAGATGGTTGACCCCTCCTTAAATGGAGCTTATTCTATGAAGTCCTTGTCACGTTTTGCAGACATCATCTCTTCATGTCTGCAGCATGAACCAGAGTTCCGACCAGCAATGGCGGAAGTTGTGCAGGATCTCTTACGAATGATCTAG 2151 0.4189 MGLHVRIFVMVMIAFTGIFCTGDTDLLDAINSLYAALGLPPLQGWKTTGGDPCAELWQGVACVFSNITQLSLRGMNLGGELGSNLNFPSIIEIDLSNNHIGGPIPSTLPPTLRNLSLSGNQLNGSIPDALSSLTQLLDLSLSNNLLDGQIPDVFQQLTVLINIDLSANNLSGQLPPSMGNLSSLSTLHLQNNELSGFLNVLQDLPLQDLNIENNLFFGPIPPQLLSIPNLRKDGNPFNTTAMPSPPAAAPAPVAMAPSPIQAPWNVANSPFTVDAPMPASARKSFISKNVSWIAIAGFLVFITLGVCLFMLWCFKRRPENKNGIKSDVGVDTISLHKHQYTDSLEKASGKSIKSLGYGEQNRRTNMILNVQDEQEIHVNKVSAGSKLATLRPPPSPLPINLGEKDLMKRAIPTKVTERQVMTSFLQVYTIASLQQYANSFSQENYIGEGTLGVVYQAELPDGKQLAVKKLDATSSIGHEQFLQLVCNISKIQHANIVKLMGYCAENGQQFLVYDYFSNRTLHDALHKDNELHAKLSWNARIRVALGAASALEYLHENLQPPVVHQNFKSANVLLNTELEAHVCDCGFGPLLSSGSAGQLSGRLLTAYGYGAPELESGSYTKQSDVFSFGVVMLELLTGRKSCDRSRPHGEQFLVRWAVPQLHDIDALTKMVDPSLNGAYSMKSLSRFADIISSCLQHEPEFRPAMAEVVQDLLRMI 716
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2601 716 Gene3D Ribonuclease Inhibitor 23 244 IPR032675 -
Prci11g2601 716 SUPERFAMILY L domain-like 22 231 - -
Prci11g2601 716 Pfam Protein tyrosine and serine/threonine kinase 443 712 IPR001245 GO:0004672|GO:0006468
Prci11g2601 716 Pfam Leucine rich repeat 110 170 IPR001611 GO:0005515
Prci11g2601 716 SUPERFAMILY Protein kinase-like (PK-like) 419 712 IPR011009 -
Prci11g2601 716 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 23 248 - -
Prci11g2601 716 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 714 IPR046959 -
Prci11g2601 716 Gene3D Phosphorylase Kinase; domain 1 402 515 - -
Prci11g2601 716 ProSiteProfiles Protein kinase domain profile. 440 716 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2601 716 Gene3D Transferase(Phosphotransferase) domain 1 516 716 - -
Prci11g2601 716 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 405 515 - -
Prci11g2601 716 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 516 716 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2601 Prci-Chr11 37093878 37101990 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2601 25 716 Strubbelig Receptor Gene Family AT4G03390 52.322 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Prci11g2601 PK_Tyr_Ser-Thr 1.4e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2601 - - ahf:112783685 915.22