Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2598 ATGGGCTTGCATGTCCGAATCTTTGTCATGGTGATGATAGCTTTCACAGGAATCTTTTGTACTGGAGATACTGACTTGCTTGACGTTGCAGCAATCAATAGCTTATATGCGGCTCTGGGCTTACCGCCTCTTCAAGGTTGGAAAACTACTGGGGGAGATCCATGTGCAGAACTGTGGCAAGGCGTGGCTTGTGTCTTCTCCAACATAACTCAATTAAGTCTCAGAGGCATGAATTTGGGTGGAGAGCTGGGCAGTAACTTAAATTTTCCCTCCATCATTGAAATAGATCTTAGCAACAACCACATTGGAGGGCCTATTCCATCCACGCTACCCCCTACATTGAGGAACTTGTCTCTTTCAGGGAATCAGTTAAATGGAAGTATTCCAGATGCCTTATCCTCTCTAACACAACTGTTAGATTTGTCATTAAGTAACAACCTTCTAGATGGACAAATCCCTGATGTGTTTCAGCAGCTTACTGTCCTGATAAACATAGACCTGTCAGCTAACAACTTGAGTGGTCAGCTACCGCCCTCAATGGGAAATTTGTCATCACTTTCAACATTACACTTGCAGAACAATGAACTTTCTGGGTTTCTTAATGTTTTGCAAGACCTTCCTCTTCAGGATTTGAATATAGAGAACAATTTATTCTTTGGGCCAATTCCTCCACAATTGTTGAGTATCCCAAATCTCAGAAAAGATGGAAATCCATTTAATACTACTGCCATGCCATCACCTCCAGCTGCAGCCCCAGCTCCTGTAGCTATGGCTCCATCACCTATCCAAGCACCTTGGAATGTGGCAAATAGTCCATTTACCGTGGATGCACCAATGCCTGCAAGTGCTAGGAAGTCCTTTATATCTAAGAATGTCAGTTGGATTGCCATTGCTGGGTTTTTGGTATTTATTACACTAGGAGTTTGTCTATTTATGTTGTGGTGCTTTAAGAGAAGACCAGAAAACAAAAATGGTATAAAAAGTGATGTAGGTGTGGACACAATATCATTACATAAACATCAATACACTGACTCTTTGGAGAAAGCATCTGGGAAATCAATAAAATCACTTGGATACGGAGAACAGAATAGAAGAACAAATATGATTCTAAATGTTCAGGATGAGCAGGAAATACATGTGAACAAAGTATCAGCAGGTTCCAAACTTGCAACATTGCGGCCACCACCATCTCCTCTTCCAATCAATCTTGGTGAAAAGGACTTGATGAAACGAGCCATACCTACCAAAGTAACTGAGAGACAAGTTATGACAAGTTTTTTGCAAGTTTATACTATTGCATCACTTCAGCAGTATGCAAATAGTTTTTCCCAAGAAAATTATATTGGTGAAGGCACGCTTGGTGTCGTTTATCAGGCTGAGCTCCCTGATGGAAAGCAACTGGCAGTGAAGAAACTGGATGCTACTTCTTCTATAGGACATGAACAATTTCTTCAATTAGTGTGCAATATTTCCAAAATTCAACATGCCAACATTGTGAAGCTTATGGGATACTGTGCTGAGAATGGTCAACAATTTCTTGTATATGATTATTTCAGCAACAGAACTCTTCATGATGCATTGCATAAAGATAATGAACTCCATGCTAAACTGTCATGGAATGCACGCATTCGTGTGGCACTTGGAGCTGCAAGTGCTTTAGAGTATCTGCATGAGAACCTCCAGCCGCCTGTTGTGCATCAAAATTTTAAATCAGCTAATGTTCTCTTGAATACTGAGCTTGAAGCACATGTCTGTGATTGTGGATTCGGTCCTTTACTGTCTTCTGGATCTGCTGGTCAGAGGAGTTTTTGGATGCGATGGAATAGACGTGGAAGTGCAACATCATGGGATCAATTTTTTCTCTGTCTAGCTGTGAAATGA 1881 0.4104 MGLHVRIFVMVMIAFTGIFCTGDTDLLDVAAINSLYAALGLPPLQGWKTTGGDPCAELWQGVACVFSNITQLSLRGMNLGGELGSNLNFPSIIEIDLSNNHIGGPIPSTLPPTLRNLSLSGNQLNGSIPDALSSLTQLLDLSLSNNLLDGQIPDVFQQLTVLINIDLSANNLSGQLPPSMGNLSSLSTLHLQNNELSGFLNVLQDLPLQDLNIENNLFFGPIPPQLLSIPNLRKDGNPFNTTAMPSPPAAAPAPVAMAPSPIQAPWNVANSPFTVDAPMPASARKSFISKNVSWIAIAGFLVFITLGVCLFMLWCFKRRPENKNGIKSDVGVDTISLHKHQYTDSLEKASGKSIKSLGYGEQNRRTNMILNVQDEQEIHVNKVSAGSKLATLRPPPSPLPINLGEKDLMKRAIPTKVTERQVMTSFLQVYTIASLQQYANSFSQENYIGEGTLGVVYQAELPDGKQLAVKKLDATSSIGHEQFLQLVCNISKIQHANIVKLMGYCAENGQQFLVYDYFSNRTLHDALHKDNELHAKLSWNARIRVALGAASALEYLHENLQPPVVHQNFKSANVLLNTELEAHVCDCGFGPLLSSGSAGQRSFWMRWNRRGSATSWDQFFLCLAVK 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2598 626 Gene3D Ribonuclease Inhibitor 28 246 IPR032675 -
Prci11g2598 626 Gene3D Transferase(Phosphotransferase) domain 1 518 614 - -
Prci11g2598 626 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 14 597 IPR046959 -
Prci11g2598 626 Pfam Leucine rich repeat 112 172 IPR001611 GO:0005515
Prci11g2598 626 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 25 250 - -
Prci11g2598 626 ProSiteProfiles Protein kinase domain profile. 442 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2598 626 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 407 517 - -
Prci11g2598 626 SUPERFAMILY Protein kinase-like (PK-like) 421 597 IPR011009 -
Prci11g2598 626 Gene3D Phosphorylase Kinase; domain 1 404 517 - -
Prci11g2598 626 SUPERFAMILY L domain-like 27 233 - -
Prci11g2598 626 Pfam Protein tyrosine and serine/threonine kinase 445 590 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2598 Prci-Chr11 37093871 37100713 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2598 28 602 Strubbelig Receptor Gene Family AT4G03390 47.480 3.86e-159 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Prci11g2598 PK_Tyr_Ser-Thr 8.8e-22 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2598 - - ahf:112783685 726.087