Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2516 ATGAAGAAATGTGAGCTCTGCAGCTCTCCTGCAAAACTCTTCTGCGAATCAGACCAAGCTGATCTCTGTTGGGTCTGTGATTCCAAGGTTCACTCTGCTAATCTCCTTGTAACAAAACACTCCAGAATCCTACTCTGCCATGTCTGTCAATCCTTAACTCCTTGGCGTGGCTCTGGACCCAAGTTTGTTCCCACCATGTCTGTTTGTGAAGATTGTGCCAGAACCAAGAATGAGGGACTGAGACAACAGAATGACCATGACGGTGGCGGTCATGGCGGCGGGGAAGATGAAGACGAAAATGATGACGACGGAGAGGAAGAAGAGGAAATCAGAGAAGAAGAAGAAGATGAAGATGATGATGATGATGAAGAAAATCAAGTGGTTCCATGGAAATGTACGCCGCCACCTCCAGTTTCAAGTTCTTGA 426 0.4671 MKKCELCSSPAKLFCESDQADLCWVCDSKVHSANLLVTKHSRILLCHVCQSLTPWRGSGPKFVPTMSVCEDCARTKNEGLRQQNDHDGGGHGGGEDEDENDDDGEEEEEIREEEEDEDDDDDEENQVVPWKCTPPPPVSSS 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2516 141 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 134 - -
Prci11g2516 141 Gene3D Classic Zinc Finger 1 37 - -
Prci11g2516 141 CDD Bbox1_BBX-like 3 45 - -
Prci11g2516 141 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Prci11g2516 141 MobiDBLite consensus disorder prediction 79 141 - -
Prci11g2516 141 MobiDBLite consensus disorder prediction 79 93 - -
Prci11g2516 141 SMART bboxneu5 1 45 IPR000315 GO:0008270
Prci11g2516 141 MobiDBLite consensus disorder prediction 94 125 - -
Prci11g2516 141 Pfam B-box zinc finger 2 43 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2516 Prci-Chr11 32106750 32107586 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2516 2 121 C2C2-CO-like Transcription Factor Family AT4G27310 48.333 4.00e-34 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Prci11g2516 zf-B_box 7.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2516 - - pcin:129285043 223.402