Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2507 ATGATCATAAACATGGATCATCATCAGCTAACTCTATTGTTTTTGTTTTTATCAACATTTCACCTATCTATATCAGGAGTATCTTCAACAAAATTCACAATAGTTAACAACTGCAACTACACAGTATGGCCGGCCATTGTTTCACATGGCGGTGGTTCTGATCTTTACCCCACTGGTTTCATTCTTCATAAGGGTGAGTCTAGGACCATCTCTGCGCCCACTTTGTGGAGTGGCAGCTTCTGGGGCCGAACACAATGCTCGCAAAACTCCACTGGATCCTTCAACTGCGTCACCGGTGATTGTGGCTCGGGGAAGCTGGAATGCGAAGGCAAGAACGGCACACAGCCTGTGACGACGGTAGAGTTCAGTTTAGGCCAAGCCGGAGAGCTTGATACGTATTATGTGAGCTTAAAAGACGGATACAACTTGCCTATGATGGTTATTCCTCAAGTCAGAAACTGCATGAGCACAGGATGTCTGGAAGATTTAAACATTACGTGCCCTGTAGAGCTCAGGCGAGCGAAAGCAATTAGTGGACAAGTGCTGGGATGCGATAATGCTTGCAAGGTAATTAATCCACCACAGCACTGTTCTATGTCATCCCCTTACTCAAAGATATTCGAGAGTGCTTGCCCACATGCTCAAATTTATGCGAATAATGACAAGGGAAGAACATTGGCATGTCTGGCATCAACTTATAGCATCAGCTTTTGTCGTCCATCCCCCGACCCAGACAAGAGATATCTGATATGGATCATTTTCGTTACTGTAATTATAGGAGCTATCATTATTAATGGCACTTTTGCATACTTCTTCCGAAAATGGATAGCAAAACAGTCAGCGAGAATATGGACGACCATATGCTTCTTGTTATTAAAATGGCTTGGAGTGTATGTAGAAAAGAAAAGTGACACTATTGGAGATTTTTCACAAGTTAAATTCCCGGAGTTGAATGTTTATGATTTCAAGAAGGTTGCAATTGCAACAAACAACTTTCACTTGTCCAATAAACTTGGACAAGGTGGTTTTGGTCCAGTGTATAAGGGAACACTACAAGATGGCCAAGACATAGCAGTGAAAAGACTATCTAGAGCATCTGGACAGGGACGAGAAGAATTTATGAATGAGATGGTTGTCATTTCCAAGCTTCAACATCGTAATCTTGTAAAACTTTTAGGTTGTTGTGTTGATGGAGAAGAAAAGATGTTGATCTATGAATATATGCCAAATAAAAGTTTGGATGTATTCATCTTTGATCCATCAAATCGTCATCAGCTTGATTGGGAGAAGCGTTTTCTCATAATTGAAGGACTAGCTCGTGGAATACTTTACCTTCATAGGGATTCTAGACTAAAAATTATACATAGGGATCTAAAGGCAAGTAATATCTTGCTCAATGAGAACCTAATTCCAAAAATATCAGATTTTGGTATGGCTAGAATTTTTAAAGAAAATGAAGATCATGCTAATACAAAAAGAGTTGTTGGAACCTACGGTTATATGTCTCCAGAATATGCAATGGAAGGATTATTTTCAGAGAAATTAGATGTATTTAGTTTTGGAGTATTGCTTCTAGAGATTATTAGTGGAAGAAGAAACTCTAGCTTTTATAACAGTGAGCATTTGAGCCTTTTAGGACTTGCTTGGAAATTATGGAATGAAAAGAACACTGCATTGTTAATTGATCCTGAAATATCTAATCCAAGCCTAGAGAATGATATGTTGCGGTGCATACAGATTGGGCTTTTATGTGTACAAGACCTTGCAAGTGAGAGGCCAAGCATGAGCATCGTAATTTCTATGCTGAATAGTGATATTGTTAATCTACTTCCTCCAAGGAAACCTGCATTCATCCAATGGCAGAGTAAAGCGAATGATGTGCCTATAGAAGAAAATGAAATATTATCCAACAATGGACTCAGTGTTAGTGAGATACATGGCAGATAG 1947 0.3934 MIINMDHHQLTLLFLFLSTFHLSISGVSSTKFTIVNNCNYTVWPAIVSHGGGSDLYPTGFILHKGESRTISAPTLWSGSFWGRTQCSQNSTGSFNCVTGDCGSGKLECEGKNGTQPVTTVEFSLGQAGELDTYYVSLKDGYNLPMMVIPQVRNCMSTGCLEDLNITCPVELRRAKAISGQVLGCDNACKVINPPQHCSMSSPYSKIFESACPHAQIYANNDKGRTLACLASTYSISFCRPSPDPDKRYLIWIIFVTVIIGAIIINGTFAYFFRKWIAKQSARIWTTICFLLLKWLGVYVEKKSDTIGDFSQVKFPELNVYDFKKVAIATNNFHLSNKLGQGGFGPVYKGTLQDGQDIAVKRLSRASGQGREEFMNEMVVISKLQHRNLVKLLGCCVDGEEKMLIYEYMPNKSLDVFIFDPSNRHQLDWEKRFLIIEGLARGILYLHRDSRLKIIHRDLKASNILLNENLIPKISDFGMARIFKENEDHANTKRVVGTYGYMSPEYAMEGLFSEKLDVFSFGVLLLEIISGRRNSSFYNSEHLSLLGLAWKLWNEKNTALLIDPEISNPSLENDMLRCIQIGLLCVQDLASERPSMSIVISMLNSDIVNLLPPRKPAFIQWQSKANDVPIEENEILSNNGLSVSEIHGR 648
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2507 648 FunFam receptor-like serine/threonine-protein kinase SD1-8 305 407 - -
Prci11g2507 648 Pfam Thaumatin family 36 238 IPR001938 -
Prci11g2507 648 SMART serkin_6 332 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2507 648 FunFam Liguleless narrow1 408 610 - -
Prci11g2507 648 ProSitePatterns Serine/Threonine protein kinases active-site signature. 453 465 IPR008271 GO:0004672|GO:0006468
Prci11g2507 648 SUPERFAMILY Osmotin, thaumatin-like protein 31 238 IPR037176 -
Prci11g2507 648 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 178 622 - -
Prci11g2507 648 ProSiteProfiles Thaumatin family profile. 29 238 IPR001938 -
Prci11g2507 648 Gene3D Transferase(Phosphotransferase) domain 1 408 608 - -
Prci11g2507 648 Pfam Protein tyrosine and serine/threonine kinase 333 600 IPR001245 GO:0004672|GO:0006468
Prci11g2507 648 ProSitePatterns Thaumatin family signature. 92 108 IPR017949 -
Prci11g2507 648 SUPERFAMILY Protein kinase-like (PK-like) 317 631 IPR011009 -
Prci11g2507 648 CDD STKc_IRAK 338 603 - -
Prci11g2507 648 SMART tha2 32 239 IPR001938 -
Prci11g2507 648 Gene3D Thaumatin 30 239 IPR037176 -
Prci11g2507 648 ProSiteProfiles Protein kinase domain profile. 332 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2507 648 PRINTS Pathogenesis-related protein signature 131 147 IPR001938 -
Prci11g2507 648 PRINTS Pathogenesis-related protein signature 79 90 IPR001938 -
Prci11g2507 648 PRINTS Pathogenesis-related protein signature 229 238 IPR001938 -
Prci11g2507 648 PRINTS Pathogenesis-related protein signature 31 43 IPR001938 -
Prci11g2507 648 Gene3D Phosphorylase Kinase; domain 1 297 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2507 Prci-Chr11 31795024 31799044 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2507 287 628 Receptor kinase-like Gene Family AT4G05200 53.936 4.04e-121 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2507 PK_Tyr_Ser-Thr 4.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2507 - - pcin:129285776 1294.26