Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2506 ATGGGTAGCGTTGAGCAAGATAACGTTGAGTCCACAAAAAAGCGACGGATCAAAGACTTCAATTCCATGCCAAAAGATAAAAGTTATCTCATCCGTTCAAGGGGGAAAAAAAGAAAGTTATCTCATCCATTTCACGAGAGTTTCCCATTGGGTTTGAGCTCTACAATGGACACCATCACATCAAATCAATTCATCAGAGACAATGAAACAATAAGCTCAAACAGCAGTGACTTCAAGCTTGGATTCTTCAGCCCACAAAATTCCACAAACCGGTATGTAGGAATCTGGTATCTTTCTGAATCTAACGTCATATGGGTGGCTAACAAAAACCAGCCACTGGTTGATGGTTTTGGTAGTGTCACAGTCACCAAGAATGGGAATCTTGTGATATTGGACAAACGAAATAAGAGTATTTGGTCCACAAATGTCTCACATATTCCGATCAATTCAACAGTGAAACTTTCCAACAGAGGGAATCTAGTCCTCTTTGATGACAACACAAGAGACCATGTGGGAGAGTTCCAAGATCCTTCTAATCTTCTAGTGCTAGGGATCAAGCTCAGTATCAATAAAATAAACGGGAAAAAGGTGAAACTTACATCATGGAAAAGCGATTCTGATCCATCGATCGGATACTACTCTGCTTCTCTTGAAAGGCCAAATGCTCCTGAGGTCTTTTTCTGGTTTAATGGAACTCATCCATATGCTCGAACTGGTCCATGGAATGGGAGGACTTTTATAGGATGGCCAAATATGTCAAATGATTATCTATATGGATGGAGAGTTGGAAATGAAGATGATGGAACTGTTTTTCTAAACTATGATTTTGGAAGTGATGCTGCCTTTGCAGTTGTTGGCTTGAATCCACAAGGCCAACTTTGGGTGGCATTGTGGTATAACAAAAGGGAGGTTTTGAGAAAGGTGTTGAATGGCACCTACTGTGATTTGTATGGCACATGTGGGGCATTTGGAAGCTGCAATTCACAAAGTTCAGCAATTTGTAGCTGTTTGCATGGTTATGAGCCAAAGAAAGTAGAGGAATGGAACAGGCAAAGTTGGACTAGTGGATGTATGAAAGTGCCTGACTTTTTGGTGAGGTCAACAACTGCTACAGAAGATAGTTGTAGGACAGAGTGCTTGAACAATTGCTCTTGTGTGGCGTATGCATATGACTCAAATGGTATTGGATGCATGCAATGGAGCGGGGACTTCATTGACCTGCAAAGATTCTCAACTGGAGGCGTTGATCTTTACATTCGTGTGCCTTTATCAGAACTTGAAACACATACACACAAAAGAAGAATAATTGCAATTACAGTGACCGTAGGAATTATTACTTTAACTGCATTTGCATATCTCCTATGGAAATTGACAGCTAAATTTGCAGGTGGGATATATTTACGTCGTCAATCTCAAAAAATGATTAGTCAACATCAAGAAATCAAAATGGACAATGAGGTTTCACATTTTGACTTTGAAGAACTTGAAATTGCAACAAACAACTTCCACTCAGCAAACATGCTTGGACATGGTGGTTTTGGTTCAGTGTACAAGGGGCAACTGAAAGATGGCCAACTAATCGCAATTAAAAGACTTTCAAAAGAATCAAGACGAGGGCAAGAAGAGTTCATGAATGAGGTTGCAGTGATTTCAAAAATTCAACACCGCAATCTAGGAACTTTAGGCTGTTGCATTGAGCAACATGAAAAAATGTTAATCTATGAATACATGCAAAACAAGAGTTTGGATACAATTCTATTTGATCCAATCAAAAAGAAAGAGCTAGATTGGCAAAAACGTTTTAAAATTATTGAAGGGATCTCTAGGGGCTTGCTTTATCTCCATAGAGATTCTAGAATAAAAATCATACGTAGAGATTTAAAAGTCAGTAATATCTTGTTGGATGAAAAGCTAAATCCAAAAATATCAGATTTTGGAATGGCTAGAATATTTAGAAGCAATGAAGATCAAGCTAGAACTAGAAGAGTGGTGGGGACATTTGGCTATATGTCTCCTGAATATGTAATGCAAGGAAAATTTTCTGAGAAATCAGATGTTTTCAGTTTTGGAGTTCTAGTGCTAGAGATTGTTAGTGGAAAGGGCAACTCAAGCTTTCATAACATGGAGGGATCTCACACCCTATTAGGACATGTCTGGAAGCTAAAGAATGAACATAACCTTATGTCCTTTATAGATTCAGATATACACAATCAAGGCTTAATTGATCTGCCAATGGCAATTAAACCGAACCACCAAAGGCGATGGAAACAACCTACCGCCAATGACTGGAATGGGATAGCAAACTTTCACTGGGATCAGATCAATAGTGAGAATGAGGATTGGATGACTGACTTCCATCAGGATCGAACAGACGATGACGACAAGGATTAG 2391 0.3906 MGSVEQDNVESTKKRRIKDFNSMPKDKSYLIRSRGKKRKLSHPFHESFPLGLSSTMDTITSNQFIRDNETISSNSSDFKLGFFSPQNSTNRYVGIWYLSESNVIWVANKNQPLVDGFGSVTVTKNGNLVILDKRNKSIWSTNVSHIPINSTVKLSNRGNLVLFDDNTRDHVGEFQDPSNLLVLGIKLSINKINGKKVKLTSWKSDSDPSIGYYSASLERPNAPEVFFWFNGTHPYARTGPWNGRTFIGWPNMSNDYLYGWRVGNEDDGTVFLNYDFGSDAAFAVVGLNPQGQLWVALWYNKREVLRKVLNGTYCDLYGTCGAFGSCNSQSSAICSCLHGYEPKKVEEWNRQSWTSGCMKVPDFLVRSTTATEDSCRTECLNNCSCVAYAYDSNGIGCMQWSGDFIDLQRFSTGGVDLYIRVPLSELETHTHKRRIIAITVTVGIITLTAFAYLLWKLTAKFAGGIYLRRQSQKMISQHQEIKMDNEVSHFDFEELEIATNNFHSANMLGHGGFGSVYKGQLKDGQLIAIKRLSKESRRGQEEFMNEVAVISKIQHRNLGRXLGCCIEQHEKMLIYEYMQNKSLDTILFDPIKKKELDWQKRFKIIEGISRGLLYLHRDSRIKIIRRDLKVSNILLDEKLNPKISDFGMARIFRSNEDQARTRRVVGTFGYMSPEYVMQGKFSEKSDVFSFGVLVLEIVSGKGNSSFHNMEGSHTLLGHVWKLKNEHNLMSFIDSDIHNQGLIDLPMAIKPNHQRRWKQPTANDWNGIANFHWDQINSENEDWMTDFHQDRTDDDDKD 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2506 797 SMART ntp_6 335 421 IPR003609 -
Prci11g2506 797 ProSiteProfiles Protein kinase domain profile. 502 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2506 797 FunFam Lectin-domain containing receptor kinase A4.3 578 741 - -
Prci11g2506 797 SMART serkin_6 502 757 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2506 797 MobiDBLite consensus disorder prediction 8 22 - -
Prci11g2506 797 Pfam S-locus glycoprotein domain 237 343 IPR000858 GO:0048544
Prci11g2506 797 SUPERFAMILY Protein kinase-like (PK-like) 481 739 IPR011009 -
Prci11g2506 797 ProSiteProfiles PAN/Apple domain profile. 336 422 IPR003609 -
Prci11g2506 797 Pfam D-mannose binding lectin 103 203 IPR001480 -
Prci11g2506 797 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Prci11g2506 797 CDD PAN_AP_plant 356 422 - -
Prci11g2506 797 Gene3D Transferase(Phosphotransferase) domain 1 578 763 - -
Prci11g2506 797 ProSiteProfiles Bulb-type lectin domain profile. 56 175 IPR001480 -
Prci11g2506 797 Pfam Protein tyrosine and serine/threonine kinase 505 713 IPR001245 GO:0004672|GO:0006468
Prci11g2506 797 Pfam PAN-like domain 358 407 IPR003609 -
Prci11g2506 797 SUPERFAMILY alpha-D-mannose-specific plant lectins 93 208 IPR036426 -
Prci11g2506 797 PIRSF SRK 41 363 IPR024171 GO:0004674
Prci11g2506 797 PIRSF SRK 358 744 IPR024171 GO:0004674
Prci11g2506 797 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 467 577 - -
Prci11g2506 797 MobiDBLite consensus disorder prediction 1 22 - -
Prci11g2506 797 Gene3D Phosphorylase Kinase; domain 1 463 577 - -
Prci11g2506 797 CDD B_lectin 62 169 IPR001480 -
Prci11g2506 797 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 54 710 - -
Prci11g2506 797 SMART blect_4 62 171 IPR001480 -
Prci11g2506 797 Gene3D - 52 171 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2506 Prci-Chr11 31651340 31655737 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2506 436 733 Receptor kinase-like Gene Family AT4G05200 53.311 1.36e-102 330
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2506 PK_Tyr_Ser-Thr 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2506 - - pcin:129286468 1604.34