Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2501 ATGGGATTCAGAACTAAAATTCACATTTTGATAAAGCTTTTGCTTTTACTTTTCAATTTAAATCTGGGTTTGAGCTCTGCAGTGGACACCATCACCACAGGTCAATTCATCAGAGATCATGAAGTAGTGAGCTCCCATAGCAGTGACTTCAAGCTTGGATTTTTCAGCCCTCAAAATTCCACAAATCGGTATGTCGGAATCTGGTATCTTTCTGAATCTAACATCATCTGGGTGGCTAACAGAAACCAGCCACTGGTTGATTCTTTTGGGATTGTCACAATCTCCAAGGATGGGAATCTTGTGGTTTTGGACAAACAAAATATGATTATTTGGTCCACTAATATCTCAAATATTGCATACAATTCTACTGCAAAACTTTTAGATATTGGGAATCTAGTCCTCTCTGATGACAACACAGGAGAAACTATATGGGAGAGCTTCCAACATCCTTCTAATGTATTTGTACCAAAGATGAATATCAGTTTGAACAAAATAACTGGAGCGAAAATGAAACTTACATCATGGAAAAGTCATTCTGATCCATCTACTGGATACTACTCGGTTTCTCTTGAACGCCCTGATGCTCCTGATATTTTTGCTTGGTTCAATGGAACTCATCCATATTCTCGAACAGGTCCATGGAACGGCAGGATTTTTACAGGAAGACCTATGATGCCAACAAGGTATCTTTATGGATGCTATGTTAAAAATGAAGATGATGGAACAGTTTATATAACTTGTGATCTTGCAAATGATACCAGTTTTCCAATTCTTAGCTTGAGCCCACAAGGCCAACTTTGGATTGCACTGTGGAATGAGAAAAGAGAAATCATGAGGAACATGTTGAATATCACTTATTGTGATCACTATGGCATTTGTGGGGCATTTGGAAGCTGTAACTCACGAAGATCACCAGCTTGTAGCTGTTTGAATGGGTATGAACCTAAGAAACTAGATGAATGGAATAAGCAAAATTGGGCTAGTGGGTGTGTGAGGAAGAAGCCATTGCAATGTGATACGATGGGAAATAGCAGCGAAGTACATGAAAAGGACGGTTTTTCAAAACTTGAGAACATGAAAGTTCCAGACTTTTTGATTAGGTCAACTGCCCCAGATCAAGATAATTGCAGAACACAATGCTTGGATAATTGTTCTTGTGTGGCATATGCGTTTGATTTGCATGGTATTGGATGTATGCATTGGAGTGGAGATTTGATTGACCAACAAAGATTCTCCAGTGGAGGGGTTGATCTTTACATTCGTTTGCCTTTGTCAGAACTTGAGAATCATTCACACAAAAGAAAAATCTTGACTGCAATTATGGCGACAATAGGAATTATTACTTTAATTGCCTGTGCATATCTCGTAAGGAAATTGACAGTTAAATGCGCAGGTGGGGCAGATTCACATAGCCAGGCTCAAAGAGTGATAAGTCAACAAGAAGAAATCAAAATGGACGAGCTTCCACTTTATGATTTTGAAGAGCTTGCAACTGCTACAAACAATTTTCACACCACAAACCTGCTTGGACGAGGTGGTTTTGGATCAGTTTACAAGGGCCAACTAAAAGATGGACAACTAATCGCAATCAAAAGGCTTTCAAAAGCATCAAGACAAGGGCAAGAAGAGTTCATGAATGAGGTTGTGGTGATTTCAAAGCTCCAGCATCGCAATCTAGTAAGACTTTTAGGCTGTTGCATTTGGCAAGATGAAAGAATATTAATTTATGAGTACCTGCAAAACAAGAGTTTGGATACAATTTTATTTGATCCAAGCAAAAACCAAAATTTAGATTGGCAAAAACGTTTTAAAATCATTGAAGGAATTTCTCGAGGTTTACTTTATTTACACAGAGATTCTAGAATAAAAATCATACACAGAGATTTAAAGGTTAGTAACATCTTATTGGATGAAGAGCTAAATCCCAAAATATCAGATTTTGGAATGGCCAGAATATTTAGAAGCAATGAAGATCAAGCTAGTACTAGAAGGGTGGTTGGCACATTTGGTTATATATCTCCTGAATACGCGATGCAAGGACAATTTTCTGAAAAATCAGATGTCTTTAGTTTTGGAGTTCTATTGCTAGAGATTGTTAGTGGGAGAAGCAACTCTCGATTGTATAACACGGAGGGATCTCAAACGCTTTTAGGATATGCATGGAAGCTATGGAATGAAGATAATCTTATGTCCTTTATAGATTCTGAAATACACTATCAAGGTTCTAGTAATGAAATTTTACGGTGTATACACATAGGACTTCTGTGTGTACAGGAACTAGCAAAAGAGCGACCAACTATAGATAATGTAGTGTCAATGCTAAGCAGTGAGATTGCCAATCTTCCTCCTCCCAGGCAACCTTCATATGTACTAAATGAGACAGGATTTGCCACAAAGTCCACTTCAGAAACACAGACCTTGTACTCTACTAACTTTGTAAGCATCACTGACATAATTGGGAGATAA 2466 0.3796 MGFRTKIHILIKLLLLLFNLNLGLSSAVDTITTGQFIRDHEVVSSHSSDFKLGFFSPQNSTNRYVGIWYLSESNIIWVANRNQPLVDSFGIVTISKDGNLVVLDKQNMIIWSTNISNIAYNSTAKLLDIGNLVLSDDNTGETIWESFQHPSNVFVPKMNISLNKITGAKMKLTSWKSHSDPSTGYYSVSLERPDAPDIFAWFNGTHPYSRTGPWNGRIFTGRPMMPTRYLYGCYVKNEDDGTVYITCDLANDTSFPILSLSPQGQLWIALWNEKREIMRNMLNITYCDHYGICGAFGSCNSRRSPACSCLNGYEPKKLDEWNKQNWASGCVRKKPLQCDTMGNSSEVHEKDGFSKLENMKVPDFLIRSTAPDQDNCRTQCLDNCSCVAYAFDLHGIGCMHWSGDLIDQQRFSSGGVDLYIRLPLSELENHSHKRKILTAIMATIGIITLIACAYLVRKLTVKCAGGADSHSQAQRVISQQEEIKMDELPLYDFEELATATNNFHTTNLLGRGGFGSVYKGQLKDGQLIAIKRLSKASRQGQEEFMNEVVVISKLQHRNLVRLLGCCIWQDERILIYEYLQNKSLDTILFDPSKNQNLDWQKRFKIIEGISRGLLYLHRDSRIKIIHRDLKVSNILLDEELNPKISDFGMARIFRSNEDQASTRRVVGTFGYISPEYAMQGQFSEKSDVFSFGVLLLEIVSGRSNSRLYNTEGSQTLLGYAWKLWNEDNLMSFIDSEIHYQGSSNEILRCIHIGLLCVQELAKERPTIDNVVSMLSSEIANLPPPRQPSYVLNETGFATKSTSETQTLYSTNFVSITDIIGR 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2501 821 Pfam Protein tyrosine and serine/threonine kinase 505 774 IPR001245 GO:0004672|GO:0006468
Prci11g2501 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 181 IPR036426 -
Prci11g2501 821 ProSiteProfiles Bulb-type lectin domain profile. 28 147 IPR001480 -
Prci11g2501 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 579 782 - -
Prci11g2501 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 147 - -
Prci11g2501 821 Pfam S-locus glycoprotein domain 210 316 IPR000858 GO:0048544
Prci11g2501 821 PIRSF SRK 3 821 IPR024171 GO:0004674
Prci11g2501 821 CDD PAN_AP_plant 335 423 - -
Prci11g2501 821 Gene3D - 24 148 IPR036426 -
Prci11g2501 821 CDD B_lectin 30 150 IPR001480 -
Prci11g2501 821 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 765 - -
Prci11g2501 821 SMART serkin_6 503 750 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2501 821 CDD STKc_IRAK 509 774 - -
Prci11g2501 821 Gene3D Phosphorylase Kinase; domain 1 464 578 - -
Prci11g2501 821 Pfam D-mannose binding lectin 75 176 IPR001480 -
Prci11g2501 821 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
Prci11g2501 821 SUPERFAMILY Protein kinase-like (PK-like) 487 812 IPR011009 -
Prci11g2501 821 SMART blect_4 34 150 IPR001480 -
Prci11g2501 821 ProSiteProfiles Protein kinase domain profile. 503 754 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2501 821 ProSiteProfiles PAN/Apple domain profile. 338 423 IPR003609 -
Prci11g2501 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Prci11g2501 821 Gene3D Transferase(Phosphotransferase) domain 1 579 781 - -
Prci11g2501 821 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 467 578 - -
Prci11g2501 821 Pfam PAN-like domain 348 407 IPR003609 -
Prci11g2501 821 SUPERFAMILY Hairpin loop containing domain-like 351 419 - -
Prci11g2501 821 SMART ntp_6 348 422 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2501 Prci-Chr11 31342206 31345498 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2501 486 791 Receptor kinase-like Gene Family AT4G23140 57.051 1.21e-120 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2501 PK_Tyr_Ser-Thr 1.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2501 - - pcin:129286414 1336.24