Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2500 ATGCCGCCGCCGCCACTTCCTCCTCCTCTACCATCCAAAACAGCCGACGATAAGTTGCTTAGCAATTACAATGAAGACGGTGGTGGGTGCGATTCTGACGAGGTTCTTGGTGGTTTCAGTTATGGCAGAAGTTTTGTACCTAGAGGCATAGGTGAACTTGAGAACCTTAATCGTTTAGAGCTGATCCAAAATCATTTGAAAGGACAAATTCCTTCCAATATATTCAACATTTCAATGTTGACACGCTTGAGCCTTGGTGCTAATTTTTTCTCTGGCCCTCTGCCATTAGATTTAGGAGTTGGCATTCCCAACTTGAAGGAATTATTACTAGAGGAGAATGAACTAATTGGACAAATTCCAAGTAGCATATCAAATGCTTCTATGCTCATTACGTTAGATTTGTCATTGAATAAATTTAGCAGAGATATACCCAATGTACTTGGAAATTTAACAAACTTGATGGAATTAGATTTGGATGGGAATGATTTGAGTGGGTTAATTCCTGATACAGTTAACAAATTACATGGTCTTCAACGCTTAAGCCTCAGTAGTAACAGATTGTATGGGTTCATCATAAATGAGCTTTGTCAACTCAAAAGTCTAAGTGAGTTGTATCTTGCCAACAACATGTTTTCAGGAGCAGTTCCAAGATGCTTCGGGAATACTTCTCTACGGAAGTTGGATTTTAGCTCTAACAAATTGATTTCTCATATACCCTCTTATCTTTGGAGTCTCAAAGATATCTTGGTCTTAGACATATCCTCCAATGCATTTAGTGGAATAATTTCACTAGAGGTATCAAACTTGAGAACAATTATACTATTGAATTTGTCAAGAAATCAAATTTCAAGAAGCATCCCTACAACTATAAGTAGTTTGCAAACTTTGCAAACCCTATCTTTGGCCCAAAACAAATTACAAGGGCATATTCCTGAATCTCTTGGTGGCATGACAAGTATAGAGTCTTTGGATCTTTTCCATAATTATTTGTCTGGTGTGATTCCAAAATCTTTAGAGTTATTAGTCCATCTTCAACACATTAATCTTTCTTATAATTTATTGCATGGAGAAATTCCAAGTAGGGGGCCTTTTCAAAATTTTACTGCTGAATCTTTTATGATGAATAATGATCTTTGCAGAAAGTCACAATTACAAGTGCACCCATGTAGGAAAGAACACAAGCACATGTCAAATAAATTGAAGCTATTGATAACGTGCTCATTGCCTATCATATGCATGATTGCCATTTTGGTTTTAGGCATTGTCTTTCTAAAGTGTAAGAGAGATCATGTTAATGATTCAACCAACAAGGATTTAATAAATTTTGAGACACCAACTAGGATATCCTATTATGAGCTTTGGCAAGGAACAAATGGATTTGATGAGAGTAATCTTCTGAGCTCTGGAAGTTTTGGATTAGTATACAAAGCAACTCTTCTAAACTCAAAAATAGTTGCTATCAAAGTGTTTAAGTTAGAAATGGAAGAAGCATTAAGAAGCTTTGACATTGAATGTGCTGCCATATGCAATTTACGCCATCGCAATCTCATTAAGGTTATCACTTGTTGCTCAAATGATCATTTCAAATCTTTAATAATGGAATTCATGGAAAATAGGAGTCTAGACAAATGGTTATACTCACATAACTATTATTTAAATATCTTGCAAAGGTTGAACATAGTGATTGATGTGGCAGTTGCTCTAGAGTATCTTCATCACAATTCTTCGACCCTAGTTGTTCACTGTGATGTGAAACCAAGCAATGTTTTGTTGGATGAAGATATGGTAGCTTATCTTAGTGATTTTGGTATTGCTAAATTGTTTGGTGAAGGACAATTGGAAATTTATACCAAAACTTTGGCTACAATTGGCTATATGGCACTAGAGTATGGATCGAAAGGAGCTGTTTCTATCAAAGGAGATGTGTATAGTTATGGTATTTTGCTAATGGAAATCTTTACAAGGAAGAAGCCAACAGATGAGATGTTTGTTCAAGGATTAAGTTTGAAAGATTGGGCAAATATGAAGCAAGAGGCTTCTAATAGCACTGATAACTCACAAAATTATTCTATTAGCATTGAGTATCTGGATGAATCAGATTATGAGCCTCTTAGTGAGGATTACGACCCGGAACCCTTCGAAGAGGAGCATGAACCTCAAAGTGAGGATTCTAATTCTGATCATGAAGAGGATCCCAATGTTGATCTCTAA 2211 0.3605 MPPPPLPPPLPSKTADDKLLSNYNEDGGGCDSDEVLGGFSYGRSFVPRGIGELENLNRLELIQNHLKGQIPSNIFNISMLTRLSLGANFFSGPLPLDLGVGIPNLKELLLEENELIGQIPSSISNASMLITLDLSLNKFSRDIPNVLGNLTNLMELDLDGNDLSGLIPDTVNKLHGLQRLSLSSNRLYGFIINELCQLKSLSELYLANNMFSGAVPRCFGNTSLRKLDFSSNKLISHIPSYLWSLKDILVLDISSNAFSGIISLEVSNLRTIILLNLSRNQISRSIPTTISSLQTLQTLSLAQNKLQGHIPESLGGMTSIESLDLFHNYLSGVIPKSLELLVHLQHINLSYNLLHGEIPSRGPFQNFTAESFMMNNDLCRKSQLQVHPCRKEHKHMSNKLKLLITCSLPIICMIAILVLGIVFLKCKRDHVNDSTNKDLINFETPTRISYYELWQGTNGFDESNLLSSGSFGLVYKATLLNSKIVAIKVFKLEMEEALRSFDIECAAICNLRHRNLIKVITCCSNDHFKSLIMEFMENRSLDKWLYSHNYYLNILQRLNIVIDVAVALEYLHHNSSTLVVHCDVKPSNVLLDEDMVAYLSDFGIAKLFGEGQLEIYTKTLATIGYMALEYGSKGAVSIKGDVYSYGILLMEIFTRKKPTDEMFVQGLSLKDWANMKQEASNSTDNSQNYSISIEYLDESDYEPLSEDYDPEPFEEEHEPQSEDSNSDHEEDPNVDL 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2500 736 Gene3D Transferase(Phosphotransferase) domain 1 536 711 - -
Prci11g2500 736 FunFam Os07g0541700 protein 536 623 - -
Prci11g2500 736 MobiDBLite consensus disorder prediction 697 736 - -
Prci11g2500 736 SUPERFAMILY L domain-like 43 407 - -
Prci11g2500 736 Pfam Leucine rich repeat 151 210 IPR001611 GO:0005515
Prci11g2500 736 Pfam Leucine rich repeat 295 354 IPR001611 GO:0005515
Prci11g2500 736 SMART LRR_typ_2 102 126 IPR003591 -
Prci11g2500 736 SMART LRR_typ_2 150 173 IPR003591 -
Prci11g2500 736 SMART LRR_typ_2 53 77 IPR003591 -
Prci11g2500 736 SMART LRR_typ_2 293 317 IPR003591 -
Prci11g2500 736 SMART LRR_typ_2 222 245 IPR003591 -
Prci11g2500 736 SMART LRR_typ_2 198 221 IPR003591 -
Prci11g2500 736 SMART LRR_typ_2 341 366 IPR003591 -
Prci11g2500 736 ProSitePatterns Serine/Threonine protein kinases active-site signature. 579 591 IPR008271 GO:0004672|GO:0006468
Prci11g2500 736 MobiDBLite consensus disorder prediction 699 718 - -
Prci11g2500 736 SUPERFAMILY Protein kinase-like (PK-like) 440 667 IPR011009 -
Prci11g2500 736 Pfam Protein tyrosine and serine/threonine kinase 464 663 IPR001245 GO:0004672|GO:0006468
Prci11g2500 736 PANTHER OS04G0122200 PROTEIN 46 144 - -
Prci11g2500 736 Gene3D Phosphorylase Kinase; domain 1 423 535 - -
Prci11g2500 736 MobiDBLite consensus disorder prediction 719 736 - -
Prci11g2500 736 ProSiteProfiles Protein kinase domain profile. 460 736 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2500 736 Gene3D Ribonuclease Inhibitor 38 391 IPR032675 -
Prci11g2500 736 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 142 393 - -
Prci11g2500 736 SMART serkin_6 460 713 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2500 Prci-Chr11 31192518 31201733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2500 46 673 Receptor kinase-like Gene Family AT3G47570 34.912 3.90e-122 388
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci11g2500 Pkinase 8.1e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2500 - K13420 pcin:129286466 1416.36