Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2497 ATGGCAATCAAAGTAATACAGTACGTGTTGATGGTGTTCCCAGGGGACGCAGCATGGGATGGTTGTATACCCAAAGACATTGGCAAGCTCCATAAACTTGAATTATTAGATATGTATGACAATTATATTAGAGGACCTTTTCCTTCCAGTATATTAAACATCTCAACATTGACTCGTGTCTCTCTTGCAAAGAATTTTCTCTCTAGCATGCTCCCATCATATTTAGGAATTGACCTTCCCAACCTAAAGCAATTGAGGCTGGGGGAAAATGAACTCAATGGACTAATCCCAAATAGCGTTTCAAATGCCTCTAACCTCAATATGTTAGATTTGAAGATGAATAAATTTGTTGGAGCTATACCCAATGCAATTGGAAAGTTAACAAACTTGATGGCATTATATGTTGAAGGAAATTCTTTGAGTGGGTTCATTCCTTGTACAGTTAACAAATTACGAGGCCTTCAACATTTAAGTCTCAGTAACAATAGATTGCAAGGGTCCATTATAAGAGAGCTATGCCAAATCAAAAGTTTAAGTGAGTTGTTTCTTGCCAACAACATGTTTTCGGGAAAGGCACCAAGGTGTCTTGGGAATACTTCTTTGCGGAAGCTGGATTTCAGCTCTAACAAATTGACTTCTCATATACCCTCTTCTCTTTGGAGTTTGAAAGATATCTTGGTCTTAGACTTATCCTCCAATGCAATAAGTGGAACAATTCCATCTGATGTGTCAAACTTGAGAGCAATTATAGTATTGAACTTGTCAAGAAATCAAATTTTAGGAACCATCCCTAAAACTATTGGTGGCTTGCAAACATTGCAAAACTTATCTTTGGCCCATAACAAATTACAAGGGCCTATTCCTGAATTGCTTAGTGGCATGATTAACATGGAGTTCTTGGATCTTTCTGAAAATTATTTGTCTAGTGTGATTCCAAAATCCTTAGAGTCACTACTCCATCTAAAGTACATTAATCTTTCCCACAATTTATTGCATGGAGAAATTCCAAATGGTGGGCCTTTTCAAAATTTTACTTCTAGATCTTTTATGATGAATAAAGATCTTTGTGGGAAGCCTCAGCTACAAGTCCAATCATGTAGGAAAGAAGACAAGCACATATCATCTAAAGTGATGATGCTATTGAAAATCTCATTGCCTATTATTGTTGTCCTTTTGGTTGTTTCATGCACCGTCTTTCTAAAGCATAAAAGAGATGTTAATGGCTTAACCAATAAGGATTTAATTAATTTAGAGACACCAATGAGGATATCCTATTATGAACTTCTACGAGGAACAAATGGGTTTGATGAGAGTAATCTTCTTGGCTGTGGAAGTTATGGATCAGTATACAAAGCAAATCTATCAAATGAAAAAATAGTTGCTGTTAAAGTATTTAACTCAGACTTGGAAGAAGCATTAAGGAGTTTTGATATTGAGTGTGACGTGTTACGCAATTTACGTCACCGCAATCTTGCTAAGATCATTAGCACTTGCTCAAATTATGATTTTAAATCTATAGTCATGGAATTCATGCCAAACAAGAGTCTTGACAGATGGTTGCACTCTCATGGAAATTGTTTAGATATTTTGCAAAGGCTGAATATTTTGATCGATGTAGCAGCTGCATTAGAATATCTTCATCATGGTTCATCTAAATCAGTTGTTCATTGTGACATAAAACCAAGTAATGTATTGTTGGATGAAGATATAGTGGCTCATCTTGGTGATTTTGGTATTGCCAAATTGTTAGGGGAAAGACAAAATGGAATTTGTACCAAAACTTTGGCAACAATTGGCTACATGGCACCAGAGTATGGTTCAAAGGGAGCTGTATCTGTGAAAGGAGATGTATATGGTTGTGGCATTTTGTTTATGGAAACTCTTACAAGAAAAAAGCCAACAGATGAGATGTTTGTTCAAGAAAAGTTCGTTGATTTGTTATTCAAGATTAGAGAACAAAGGAACTTTAGTAGTCTGAGCCCATTGAGAGCTGATGAACCTGAGGAGCCCCTCGTCCTTGAGTAG 2025 0.364 MAIKVIQYVLMVFPGDAAWDGCIPKDIGKLHKLELLDMYDNYIRGPFPSSILNISTLTRVSLAKNFLSSMLPSYLGIDLPNLKQLRLGENELNGLIPNSVSNASNLNMLDLKMNKFVGAIPNAIGKLTNLMALYVEGNSLSGFIPCTVNKLRGLQHLSLSNNRLQGSIIRELCQIKSLSELFLANNMFSGKAPRCLGNTSLRKLDFSSNKLTSHIPSSLWSLKDILVLDLSSNAISGTIPSDVSNLRAIIVLNLSRNQILGTIPKTIGGLQTLQNLSLAHNKLQGPIPELLSGMINMEFLDLSENYLSSVIPKSLESLLHLKYINLSHNLLHGEIPNGGPFQNFTSRSFMMNKDLCGKPQLQVQSCRKEDKHISSKVMMLLKISLPIIVVLLVVSCTVFLKHKRDVNGLTNKDLINLETPMRISYYELLRGTNGFDESNLLGCGSYGSVYKANLSNEKIVAVKVFNSDLEEALRSFDIECDVLRNLRHRNLAKIISTCSNYDFKSIVMEFMPNKSLDRWLHSHGNCLDILQRLNILIDVAAALEYLHHGSSKSVVHCDIKPSNVLLDEDIVAHLGDFGIAKLLGERQNGICTKTLATIGYMAPEYGSKGAVSVKGDVYGCGILFMETLTRKKPTDEMFVQEKFVDLLFKIREQRNFSSLSPLRADEPEEPLVLE 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2497 674 ProSiteProfiles Protein kinase domain profile. 435 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2497 674 Gene3D Ribonuclease Inhibitor 16 368 IPR032675 -
Prci11g2497 674 Gene3D Phosphorylase Kinase; domain 1 417 510 - -
Prci11g2497 674 SMART LRR_typ_2 246 270 IPR003591 -
Prci11g2497 674 SMART LRR_typ_2 151 175 IPR003591 -
Prci11g2497 674 SMART LRR_typ_2 127 150 IPR003591 -
Prci11g2497 674 SMART LRR_typ_2 318 342 IPR003591 -
Prci11g2497 674 SMART LRR_typ_2 199 222 IPR003591 -
Prci11g2497 674 SMART LRR_typ_2 79 102 IPR003591 -
Prci11g2497 674 SMART LRR_typ_2 294 317 IPR003591 -
Prci11g2497 674 FunFam Serine-threonine protein kinase plant-type 416 510 - -
Prci11g2497 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 554 566 IPR008271 GO:0004672|GO:0006468
Prci11g2497 674 ProSitePatterns Protein kinases ATP-binding region signature. 441 463 IPR017441 GO:0005524
Prci11g2497 674 SUPERFAMILY L domain-like 18 360 - -
Prci11g2497 674 Pfam Leucine rich repeat 128 187 IPR001611 GO:0005515
Prci11g2497 674 Pfam Leucine rich repeat 272 331 IPR001611 GO:0005515
Prci11g2497 674 SMART serkin_6 435 672 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2497 674 SUPERFAMILY Protein kinase-like (PK-like) 417 651 IPR011009 -
Prci11g2497 674 Pfam Protein kinase domain 436 641 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2497 674 Gene3D Transferase(Phosphotransferase) domain 1 511 671 - -
Prci11g2497 674 SMART LRR_sd22_2 198 219 - -
Prci11g2497 674 SMART LRR_sd22_2 30 56 - -
Prci11g2497 674 SMART LRR_sd22_2 222 245 - -
Prci11g2497 674 SMART LRR_sd22_2 151 174 - -
Prci11g2497 674 SMART LRR_sd22_2 270 293 - -
Prci11g2497 674 FunFam Os07g0541700 protein 511 598 - -
Prci11g2497 674 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 77 370 - -
Prci11g2497 674 PANTHER OS04G0122200 PROTEIN 21 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2497 Prci-Chr11 31038088 31044660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2497 15 638 Receptor kinase-like Gene Family AT3G47570 38.696 2.97e-130 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci11g2497 Pkinase 1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2497 - K13420 pcin:129285519 826.624