Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2492 ATGGAAAATGATTTGTCTGGCGAAATGCCTTCCATTTGGCATCAATGCAAGGACTTGAAATATCTATTATTAGGTGATAACATGTTCAATCCAGGAATTATTCCAAGTGACATTGAAATTTGTGACCAACCTCCAATCATATATCTTCACAACAACAACTTGAAAGGTGAAATTCCATTGTCTCTCTTTAGCATTTCTACTCTAAGAAATGTAGTTTTAGCCAAAAACAATTTGAATGGTAATCTTCCAATACTAGCTGGAAATGAGACATTGCTAGAAAAATTACAACTGCAGTACAACTCTTTTACAGGTGGAATTCCTTCATTTATTTGGAACATGTCTTCTTTGAGAGTGGTTAACCTTGGCATGAATCATCTAAATGGTAATTTGCCAGAAGAATTGTGCCAACAACTCCCTTTACTAGAAATCTTTGATGTTGACAGTAATCAATTAGAGGGAAGCATTCCAAAATCAATAAGTAATTGCACATCTTTAAAGAAATTGTATTTGGATGGTAACTCATTTACAGGAATGGGCCTTCCCAACTTAATAGAACTACGGCTGACGGGGAATGAACTAACTGGACAAATTCCAAACAGCATATCAAATGCTTCTAAGCTCATTTCATTAGATTTGTCATTGAATAAATTTAATGAAGCTATACCTAATATGCTCGGAAATCTGTCAAACTTGATACAATTATCTGTGGATGGGAATGATTTGAATGGGTTGATTCCTCATACAATTGGCAAATTACATAGCCTCCAATACTTAAGTCTTAGCAGCAATGGATTGCAAGGGTCCATTATAGATGAACTTTGTCAACTCAAAAGTCTAAGTGAATTGTATCTTGCCAACAACATGTTTTCAGGAGTGGTTCCAAGATGCCTTGGGAATACTTCTTTACGGAAGTTGAATTTGAGCTCTAACAAATTGATTTCTCATATACCCTCTTCCCTTTGGAGTCTCAAAGATATCTTGGCAATAGACATGTCCTCCAATGCATTGAGTGGGACAATTTCACCAGAGGTATCAAACTTGAGAACAATTATATTATTGAACTTGTCACGAAATCAAATTTCAGGAAGCATCCCTACAACTATGGGTGGCTTGCAAACTTTGATAAGCTTATCATTGGCCCAAAACAAATTACAAAGGCATATTCCTAAATCACTTGGTAGCATGGTAAGTTTGGAGTCCATGGATCTTTCTCATAATTACTTGTCTGGTGTGATTCCAAAATCCTTAGAGTTATTAGTTCATCTTCAACACATTAATCTTTCTTATAATTTATTGCATGGAGAAATTCCAAGTAGGGGGCGGTTTCAGAATTTCACTGCTGAATCTTTTATGATGAATAATGGTCTTTGTGGGAAGTCCCTATTACAAGTTCACCCATGTAGGGAAGAACACAAGCACATATCAAATAAAGTGAAGCTATTGATAAAGTGCTCATTGCCTATCATATGCATGGTTGTCATTTTGGTTGTTTTAGGCATTGTCTTTTTAAAGTGTAAGAGAGATCATGTTAATGATTCAACCAACAGGGATTTAATAGATTTTGACATTCCAACTAGGATATCCTATTATGAGCTCTGGCAGGGAACAAATGGATTTGATAAGAGTAATCTTCTTGGCTTTGGAAGTTTTGGATTGGTATACAAAGCAACTCTTCCAAACTCAAAAATAGTTGCTGTCAAAGTATTTAAGGTAGAAATGGAAGAAGCATTAAGAAGTTTTGATATTGAATGTGTTGCCATGTGCAATTTACGCCATCGCAATCTCATTAAGATCATCAGTTGTTGCTCAAATGATCATTTCAAATCTCTAATAATGGAATTCATGGAAAATGGGAGTCTTGACAAATGGTTATACTCTCATAACTATTGTTTAAATGTCTTGCAAAGGTTGAACATAATGATTGATGTGGCAGCTGCTTTGGAATACCTTCACCATAGTTCTTCTACACTAGTTGTTCATTGTGATGTGAAACCAAGCAATGTTTTATTAGATGAAGATATGGTGGCTCATCTTAGTGATTTTGGTATTGCTAGATTGTTTAGTGAAGGACAACTAGAAATTTATACCAAAACTTTGGCTACAATTGGCTATATGGCTCCAGAGTATGGATCAGAAGGAGTTGTTTCTGTCAAAGGAGATGTGTATAGTTATGGTATTTTACTAATGGAAATGTTTACAAGGAAGAAGCCAACGGATGAGATGTTTGTTGAAGGATTAAGTTTGAAGCATTGGGTTAGCAAATCAACACCACATTCAATCACCAATATTCTAGATGCCAATTTGCTACTCAAAGAACATCAAAATATTTGTAATATATTACCTTATATGTCATTAGTTTTTGAGCTAGCATTGAATTGTTGCCATGACTTACCTGAGGCACGACTTTCGATGGCTGATGTTGTGGTGTCATTAAAAAAAATCAAGGTTATATTTATGGAAAATGTTAGAGGCACTTCAAGTTGA 2484 0.3514 MENDLSGEMPSIWHQCKDLKYLLLGDNMFNPGIIPSDIEICDQPPIIYLHNNNLKGEIPLSLFSISTLRNVVLAKNNLNGNLPILAGNETLLEKLQLQYNSFTGGIPSFIWNMSSLRVVNLGMNHLNGNLPEELCQQLPLLEIFDVDSNQLEGSIPKSISNCTSLKKLYLDGNSFTGMGLPNLIELRLTGNELTGQIPNSISNASKLISLDLSLNKFNEAIPNMLGNLSNLIQLSVDGNDLNGLIPHTIGKLHSLQYLSLSSNGLQGSIIDELCQLKSLSELYLANNMFSGVVPRCLGNTSLRKLNLSSNKLISHIPSSLWSLKDILAIDMSSNALSGTISPEVSNLRTIILLNLSRNQISGSIPTTMGGLQTLISLSLAQNKLQRHIPKSLGSMVSLESMDLSHNYLSGVIPKSLELLVHLQHINLSYNLLHGEIPSRGRFQNFTAESFMMNNGLCGKSLLQVHPCREEHKHISNKVKLLIKCSLPIICMVVILVVLGIVFLKCKRDHVNDSTNRDLIDFDIPTRISYYELWQGTNGFDKSNLLGFGSFGLVYKATLPNSKIVAVKVFKVEMEEALRSFDIECVAMCNLRHRNLIKIISCCSNDHFKSLIMEFMENGSLDKWLYSHNYCLNVLQRLNIMIDVAAALEYLHHSSSTLVVHCDVKPSNVLLDEDMVAHLSDFGIARLFSEGQLEIYTKTLATIGYMAPEYGSEGVVSVKGDVYSYGILLMEMFTRKKPTDEMFVEGLSLKHWVSKSTPHSITNILDANLLLKEHQNICNILPYMSLVFELALNCCHDLPEARLSMADVVVSLKKIKVIFMENVRGTSS 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2492 827 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 615 823 - -
Prci11g2492 827 SMART LRR_typ_2 395 418 IPR003591 -
Prci11g2492 827 SMART LRR_typ_2 228 251 IPR003591 -
Prci11g2492 827 SMART LRR_typ_2 419 444 IPR003591 -
Prci11g2492 827 SMART LRR_typ_2 138 162 IPR003591 -
Prci11g2492 827 SMART LRR_typ_2 180 204 IPR003591 -
Prci11g2492 827 SMART LRR_typ_2 276 299 IPR003591 -
Prci11g2492 827 SMART LRR_typ_2 113 137 IPR003591 -
Prci11g2492 827 SMART LRR_typ_2 300 323 IPR003591 -
Prci11g2492 827 Gene3D Phosphorylase Kinase; domain 1 503 614 - -
Prci11g2492 827 Gene3D Ribonuclease Inhibitor 1 179 IPR032675 -
Prci11g2492 827 SUPERFAMILY L domain-like 243 459 - -
Prci11g2492 827 Pfam Leucine rich repeat 374 432 IPR001611 GO:0005515
Prci11g2492 827 Pfam Leucine rich repeat 231 288 IPR001611 GO:0005515
Prci11g2492 827 Pfam Leucine Rich Repeat 301 323 IPR001611 GO:0005515
Prci11g2492 827 Pfam Leucine Rich Repeat 182 203 IPR001611 GO:0005515
Prci11g2492 827 ProSiteProfiles Protein kinase domain profile. 539 819 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2492 827 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 179 471 - -
Prci11g2492 827 SMART serkin_6 539 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2492 827 ProSitePatterns Serine/Threonine protein kinases active-site signature. 658 670 IPR008271 GO:0004672|GO:0006468
Prci11g2492 827 ProSitePatterns Protein kinases ATP-binding region signature. 545 567 IPR017441 GO:0005524
Prci11g2492 827 Pfam Protein kinase domain 540 808 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2492 827 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 83 178 - -
Prci11g2492 827 SUPERFAMILY RNI-like 3 313 - -
Prci11g2492 827 ProSiteProfiles Leucine-rich repeat profile. 301 324 IPR001611 GO:0005515
Prci11g2492 827 SUPERFAMILY Protein kinase-like (PK-like) 520 811 IPR011009 -
Prci11g2492 827 Gene3D Transferase(Phosphotransferase) domain 1 615 822 - -
Prci11g2492 827 PANTHER LEUCINE RICH REPEAT KINASE 2 110 815 - -
Prci11g2492 827 Gene3D Ribonuclease Inhibitor 180 476 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2492 Prci-Chr11 30795567 30808128 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2492 3 825 Receptor kinase-like Gene Family AT3G47570 36.937 1.21e-167 510
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci11g2492 Pkinase 7.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2492 - K13420 pcin:129285519 1337.01