Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2491 ATGGAAAATGATTTGTCTGGCGAAATGCCTTCCATTTGGCATCAATGCAAGGACTTGAAATATCTATTATTAGGTGATAACATGTTCAATCCAGGAATTATTCCAAGTGACATTGAAATTTGTGACCAACCTCCAATCATATATCTTCACAACAACAACTTGAAAGGTGAAATTCCATTGTCTCTCTTTAGCATTTCTACTCTAAGAAATGTAGTTTTAGCCAAAAACAATTTGAATGGTAATCTTCCAATACTAGCTGGAAATGAGACATTGCTAGAAAAATTACAACTGCAGTACAACTCTTTTACAGGTGGAATTCCTTCATTTATTTGGAACATGTCTTCTTTGAGAGTGGTTAACCTTGGCATGAATCATCTAAATGGTAATTTGCCAGAAGAATTGTGCCAACAACTCCCTTTACTAGAAATCTTTGATGTTGACAGTAATCAATTAGAGGGAAGCATTCCAAAATCAATAAGTAATTGCACATCTTTAAAGAAATTGTATTTGGATGGTAACTCATTTACAGGTTTTATACCCAAGGAAATGGGCAGTTTAGCTGAACTTGAAGTGTTATCTATGGCCATAAACTATTTGAGTGGACCCATTCCTTTTAATATATTCAACATTTCAACATTGACAAGCTTACGCCTTGACTCTAATTCGCTCTCTGGTCTTCTCCCATCATATTTAGGAATGGGCCTTCCCAACTTAATAGAACTACGGCTGACGGGGAATGAACTAACTGGACAAATTCCAAACAGCATATCAAATGCTTCTAAGCTCATTTCATTAGATTTGTCATTGAATAAATTTAATGAAGCTATACCTAATATGCTCGGAAATCTGTCAAACTTGATACAATTATCTGTGGATGGGAATGATTTGAATGGGTTGATTCCTCATACAATTGGCAAATTACATAGCCTCCAATACTTAAGTCTTAGCAGCAATGGATTGCAAGGGTCCATTATAGATGAACTTTGTCAACTCAAAAGTCTAAGTGAATTGTATCTTGCCAACAACATGTTTTCAGGAGTGGTTCCAAGATGCCTTGGGAATACTTCTTTACGGAAGTTGAATTTGAGCTCTAACAAATTGATTTCTCATATACCCTCTTCCCTTTGGAGTCTCAAAGATATCTTGGCAATAGACATGTCCTCCAATGCATTGAGTGGGACAATTTCACCAGAGGTATCAAACTTGAGAACAATTATATTATTGAACTTGTCACGAAATCAAATTTCAGGAAGCATCCCTACAACTATGGGTGGCTTGCAAACTTTGATAAGCTTATCATTGGCCCAAAACAAATTACAAAGGCATATTCCTAAATCACTTGGTAGCATGGTAAGTTTGGAGTCCATGGATCTTTCTCATAATTACTTGTCTGGTGTGATTCCAAAATCCTTAGAGTTATTAGTTCATCTTCAACACATTAATCTTTCTTATAATTTATTGCATGGAGAAATTCCAAGTAGGGGGCGGTTTCAGAATTTCACTGCTGAATCTTTTATGATGAATAATGGTCTTTGTGGGAAGTCCCTATTACAAGTTCACCCATGTAGGGAAGAACACAAGCACATATCAAATAAAGTGAAGCTATTGATAAAGTGCTCATTGCCTATCATATGCATGGTTGTCATTTTGGTTGTTTTAGGCATTGTCTTTTTAAAGTGTAAGAGAGATCATGTTAATGATTCAACCAACAGGGATTTAATAGATTTTGACATTCCAACTAGGATATCCTATTATGAGCTCTGGCAGGGAACAAATGGATTTGATAAGAGTAATCTTCTTGGCTTTGGAAGTTTTGGATTGGTATACAAAGCAACTCTTCCAAACTCAAAAATAGTTGCTGTCAAAGTATTTAAGGTAGAAATGGAAGAAGCATTAAGAAGTTTTGATATTGAATGTGTTGCCATGTGCAATTTACGCCATCGCAATCTCATTAAGATCATCAGTTGTTGCTCAAATGATCATTTCAAATCTCTAATAATGGAATTCATGGAAAATGGGAGTCTTGACAAATGGTTATACTCTCATAACTATTGTTTAAATGTCTTGCAAAGGTTGAACATAATGATTGATGTGGCAGCTGCTTTGGAATACCTTCACCATAGTTCTTCTACACTAGTTGTTCATTGTGATGTGAAACCAAGCAATGTTTTATTAGATGAAGATATGGTGGCTCATCTTAGTGATTTTGGTATTGCTAGATTGTTTAGTGAAGGACAACTAGAAATTTATACCAAAACTTTGGCTACAATTGGCTATATGGCTCCAGAGTATGGATCAGAAGGAGTTGTTTCTGTCAAAGGAGATGTGTATAGTTATGGTATTTTACTAATGGAAATGTTTACAAGGAAGAAGCCAACGGATGAGATGTTTGTTGAAGGATTAAGTTTGAAGCATTGGGTTAGCAAATCAACACCACATTCAATCACCAATATTCTAGATGCCAATTTGCTACTCAAAGAACATCAAAATATTTGTAATATATTACCTTATATGTCATTAGTTTTTGAGCTAGCATTGAATTGTTGCCATGACTTACCTGAGGCACGACTTTCGATGGCTGATGTTGTGGTGTCATTAAAAAAAATCAAGGTTATATTTATGGAAAATGTTAGAGGCACTTCAAGTTGA 2649 0.353 MENDLSGEMPSIWHQCKDLKYLLLGDNMFNPGIIPSDIEICDQPPIIYLHNNNLKGEIPLSLFSISTLRNVVLAKNNLNGNLPILAGNETLLEKLQLQYNSFTGGIPSFIWNMSSLRVVNLGMNHLNGNLPEELCQQLPLLEIFDVDSNQLEGSIPKSISNCTSLKKLYLDGNSFTGFIPKEMGSLAELEVLSMAINYLSGPIPFNIFNISTLTSLRLDSNSLSGLLPSYLGMGLPNLIELRLTGNELTGQIPNSISNASKLISLDLSLNKFNEAIPNMLGNLSNLIQLSVDGNDLNGLIPHTIGKLHSLQYLSLSSNGLQGSIIDELCQLKSLSELYLANNMFSGVVPRCLGNTSLRKLNLSSNKLISHIPSSLWSLKDILAIDMSSNALSGTISPEVSNLRTIILLNLSRNQISGSIPTTMGGLQTLISLSLAQNKLQRHIPKSLGSMVSLESMDLSHNYLSGVIPKSLELLVHLQHINLSYNLLHGEIPSRGRFQNFTAESFMMNNGLCGKSLLQVHPCREEHKHISNKVKLLIKCSLPIICMVVILVVLGIVFLKCKRDHVNDSTNRDLIDFDIPTRISYYELWQGTNGFDKSNLLGFGSFGLVYKATLPNSKIVAVKVFKVEMEEALRSFDIECVAMCNLRHRNLIKIISCCSNDHFKSLIMEFMENGSLDKWLYSHNYCLNVLQRLNIMIDVAAALEYLHHSSSTLVVHCDVKPSNVLLDEDMVAHLSDFGIARLFSEGQLEIYTKTLATIGYMAPEYGSEGVVSVKGDVYSYGILLMEMFTRKKPTDEMFVEGLSLKHWVSKSTPHSITNILDANLLLKEHQNICNILPYMSLVFELALNCCHDLPEARLSMADVVVSLKKIKVIFMENVRGTSS 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2491 882 Pfam Leucine Rich Repeat 237 258 IPR001611 GO:0005515
Prci11g2491 882 Pfam Leucine Rich Repeat 356 378 IPR001611 GO:0005515
Prci11g2491 882 ProSitePatterns Serine/Threonine protein kinases active-site signature. 713 725 IPR008271 GO:0004672|GO:0006468
Prci11g2491 882 SUPERFAMILY Protein kinase-like (PK-like) 575 866 IPR011009 -
Prci11g2491 882 Gene3D Phosphorylase Kinase; domain 1 558 669 - -
Prci11g2491 882 SUPERFAMILY RNI-like 3 297 - -
Prci11g2491 882 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 235 526 - -
Prci11g2491 882 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 281 867 - -
Prci11g2491 882 ProSiteProfiles Protein kinase domain profile. 594 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2491 882 Pfam Protein kinase domain 595 863 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2491 882 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 1 234 - -
Prci11g2491 882 ProSitePatterns Protein kinases ATP-binding region signature. 600 622 IPR017441 GO:0005524
Prci11g2491 882 Gene3D Ribonuclease Inhibitor 1 234 IPR032675 -
Prci11g2491 882 Pfam Leucine rich repeat 429 487 IPR001611 GO:0005515
Prci11g2491 882 Pfam Leucine rich repeat 285 343 IPR001611 GO:0005515
Prci11g2491 882 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 670 878 - -
Prci11g2491 882 SMART LRR_typ_2 331 354 IPR003591 -
Prci11g2491 882 SMART LRR_typ_2 355 378 IPR003591 -
Prci11g2491 882 SMART LRR_typ_2 474 499 IPR003591 -
Prci11g2491 882 SMART LRR_typ_2 450 473 IPR003591 -
Prci11g2491 882 SMART LRR_typ_2 283 306 IPR003591 -
Prci11g2491 882 SMART LRR_typ_2 138 162 IPR003591 -
Prci11g2491 882 SMART LRR_typ_2 235 259 IPR003591 -
Prci11g2491 882 SMART LRR_typ_2 113 137 IPR003591 -
Prci11g2491 882 ProSiteProfiles Leucine-rich repeat profile. 356 379 IPR001611 GO:0005515
Prci11g2491 882 Gene3D Ribonuclease Inhibitor 235 531 IPR032675 -
Prci11g2491 882 SUPERFAMILY L domain-like 262 516 - -
Prci11g2491 882 Gene3D Transferase(Phosphotransferase) domain 1 670 877 - -
Prci11g2491 882 SMART serkin_6 594 873 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2491 Prci-Chr11 30795567 30808573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2491 49 880 Receptor kinase-like Gene Family AT3G47570 36.393 1.67e-162 499
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci11g2491 Pkinase 8.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2491 - K13420 pcin:129285519 1721.44