Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2487 ATGGACAAAGCATTAAGAAGCTTTGATATTGAATGTGCTACCATGTGCAATTTACGCCATTGCAATCTCATTAAGGTCATCAGTTGCTGCTCAAATGATCATTTCAAATCTCTAATAATGGAATTCATGGAAAATGGGAGTCTAGACAAATGGTTATACTCTCATAACTATTATTTAAATGTCTTGCAAAGGTTGAACATAATGATTGATGTGGCAGTTGCTTTAGAGTATCTTCATCATGGTTCTTTAACACTAGTTGTTCATTGTGATGTGAAACCAAACAATGTTTTATTGGATGAAGATATGGTAGCTCATCTTAGTGATTTTGGTATTGCTAAATTGTTTAGTGAAGGACAACTAGAAATTTATACAAAAACTTTGGCTACAATTGGCTATATGGCACCAGAGTATGGATCAAAAGGAGTTGTTTCTATCAAAGGAAACATGTATAATTATGGTATTTTGCTAATGGAAATCTTTACAAGGAAGAAGCCGACAGATGAGATGTTTGTTCAAGGATTAAGTTTGAAAGATTGGCTAAGGGTTAGTGAGAAGGATGTGGTAAAGACGGCTTTCAGGACTCAATATGGCCATTATGAGTTCTTGTTTGTGGTGGTTTTTATTGATGATATCTTGATCTACTCTAAAGATGAAGAGCAATATGCCAGACACTTGAGGACTGTCCTAAGATTTTTGCAAGATGATAAGCTATATGCCAAGCTTAGTAAGTGCGAGTTGTGGATGAGAGAGATTAGATTCTTGAGACATATCACATCAGTAAATGGTTTTGTGGTTGATCTGCATAAGAAGGTTAAGGTAGAGCACCAGAGACCATCAGGGTTGTTACAGACTCTGGAGATTCCCAAATGA 870 0.3586 MDKALRSFDIECATMCNLRHCNLIKVISCCSNDHFKSLIMEFMENGSLDKWLYSHNYYLNVLQRLNIMIDVAVALEYLHHGSLTLVVHCDVKPNNVLLDEDMVAHLSDFGIAKLFSEGQLEIYTKTLATIGYMAPEYGSKGVVSIKGNMYNYGILLMEIFTRKKPTDEMFVQGLSLKDWLRVSEKDVVKTAFRTQYGHYEFLFVVVFIDDILIYSKDEEQYARHLRTVLRFLQDDKLYAKLSKCELWMREIRFLRHITSVNGFVVDLHKKVKVEHQRPSGLLQTLEIPK 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2487 289 Pfam Protein tyrosine and serine/threonine kinase 5 169 IPR001245 GO:0004672|GO:0006468
Prci11g2487 289 Gene3D - 203 257 IPR043128 -
Prci11g2487 289 SUPERFAMILY Protein kinase-like (PK-like) 4 174 IPR011009 -
Prci11g2487 289 SUPERFAMILY DNA/RNA polymerases 180 274 IPR043502 -
Prci11g2487 289 ProSitePatterns Serine/Threonine protein kinases active-site signature. 86 98 IPR008271 GO:0004672|GO:0006468
Prci11g2487 289 ProSiteProfiles Protein kinase domain profile. 1 254 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2487 289 Gene3D Transferase(Phosphotransferase) domain 1 1 192 - -
Prci11g2487 289 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 5 234 - -
Prci11g2487 289 Pfam Reverse transcriptase (RNA-dependent DNA polymerase) 200 254 IPR000477 -
Prci11g2487 289 SMART serkin_6 1 248 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2487 Prci-Chr11 30215987 30231477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2487 4 181 Receptor kinase-like Gene Family AT3G47570 44.162 2.72e-49 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci11g2487 Pkinase 3.8e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2487 - K13420 pcin:129286455 588.186