Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2485 ATGAGCACCGAGAGCTCAGCGGACAAAATGGTGAGTTTCAATAAGTGGAAAGATCCTAACTGTTGGTATAGATTAATGATTACCGTTCGATCATCCAGAATTCTTTCTTCCATCGGTTGGGTGGGATTTTGTTTCCTTTCTCCAAATTTTCCCGTGAAACTTCAGAGACGAACAGAGATGGACAACACAATCCAAAACACAAAAACAGAGCAAGAAAATGGAAGAAACTGCATTGAAACAGGGCAAGATGATGAAAGAAATTGCATCGAAATAGAGGAGGAAGAAGGAATAGAAGGATTGATGCAAGCTAGAGAAGAGGAGGAAGGAAGAAATGGATCGCTGCAACCTCAACAAGAGAAGGAAGGACAAAGACGGGACTTTATGATGGAGGATGAATTGAAACCCAAAATAGGAAGGGAGTTTGGAAGTTGGGAAGAGGCATGGGAATTTTGGCAAGAATATGCTAAAAACACTGGGTTTGAACCTAGAAAGTATAATGGTACAAATAGCAGAAAAGATGGTTCACTTATTACATATCGATATGTATGTTGTAAGGAAGGTTGTCGGAAAGAAGGTAAAAAGGAGACATATTCTTCCAAGTATCGGGCAGAGACAAGGACTAACTGTAAGGCAAGAATGATAGTGTCTTTTATTGATCAAAAGTATAAAATCACTAAATTTGATGAAGAGCATAATCATCCCTTGCACACACCAGCAACAAGGCACTTCTTAGCCTCTCAAAGAAATTTATCAGAAGTTGATGCTTATGGGATTGATTTGGCAAGAAAGTCTGGGCTCCAACAAAAAGCTACGTTTGACTTAATGAGTACATATGCTAGAGGTAAATCAAGTCTTGGATATACTCGAGTAGATATGCAAAACTATTTGCAAAAAGAAAAGCAAAGAAGTATGAAGTATGGAGAGGTAAGGTGTCTATTTGAATATTTTCAAAAACAACTTGCAGCAAATCCTGCATTCTACCATAAATATCAGGTGGACACAGAAGAACAAATCACCAATGTGTTTTGGGCAGATGCTGGAATGCTAATAGACTATGCACTTTTTGGTGAGGTCGTATCTCTAGACACAACATATTGCACAAATTGTGATCATCGACCTCTTGCAATCTTTTCTGGCTTTAATCATTATAGAAGTGCAGTCATTTTTGGAGTAGCATTATTGTATGATGAGACCACTATGTCTTTCAAGTGGCTATTAGAAACTTTCTTAGATGCTCATATGCAAAAGAAGCCTGAAACTGTGTTTACAGATCAAGATCAAGCTATGGCAAGAGCTTTAAGTGAAATTCTTCCTGACACAAAGCATTGTCTGTGTACTTGGCATTTAAAGCAAAATGGCATCAAATACTTGGGAAATTTAATGAAAGATGGATCACATTTTTTAACTGATTTCTGTAAATGCATGTCTAAAATTTCAGAAGAAGACAAGTTTGAAGACGCATGGAGCCAATTAATCTCTTCTTATGATGTCCATGAGAATACATGGTTGATATCCATGTATAAGATTAAAGAGAAATGGGCTTGGTGCTCTGTAAAAAATCATCGTACTCTAGGTATGAGAAGTACACAGCTTAGTGAAAGTGTGAATGCTGATGTAAAGAGATGCACAACACCGGGCTTAGCTATAAATGAATTCTTTACCACTTTTGACAAAGTTGTTGCAGAGAAGCGAGACAAGGAATTGAAGCTTGAGTTTGATTCTCGACAACAAATACTGAGGATGGTTAATCAAAGTGCACCTATATTGTGCCAACTTGTGCTAACTTATACCCCCGATGCCTTTGACATGTTCCAAGCACAATGGGATCTCCAATTCTCTGTGATGTTGTCTAATCGTGATGAGGAAGGACCATCGTATGTATACACTGCTCATATGATTGATGAAGAAGGAGAATGGAGAGTTGAGTTTAAACCTGAGACATATGAAATTTGTTGCACTTGTCGGATGTTTGAGACTACTGGGATATTATGTTGTCATGCATTGAAAGTATACGAGTCGAAGGATGTGAGAATTATGCCCAAGCAATACATTATCAAGAGATGGACTAGAGAAGCAAGGAGTGATGTTGTATATGATATTGGAGGGAGTGAGATACAAGTAGACCCAAGGCTTGAAATCACATAA 2145 0.38 MSTESSADKMVSFNKWKDPNCWYRLMITVRSSRILSSIGWVGFCFLSPNFPVKLQRRTEMDNTIQNTKTEQENGRNCIETGQDDERNCIEIEEEEGIEGLMQAREEEEGRNGSLQPQQEKEGQRRDFMMEDELKPKIGREFGSWEEAWEFWQEYAKNTGFEPRKYNGTNSRKDGSLITYRYVCCKEGCRKEGKKETYSSKYRAETRTNCKARMIVSFIDQKYKITKFDEEHNHPLHTPATRHFLASQRNLSEVDAYGIDLARKSGLQQKATFDLMSTYARGKSSLGYTRVDMQNYLQKEKQRSMKYGEVRCLFEYFQKQLAANPAFYHKYQVDTEEQITNVFWADAGMLIDYALFGEVVSLDTTYCTNCDHRPLAIFSGFNHYRSAVIFGVALLYDETTMSFKWLLETFLDAHMQKKPETVFTDQDQAMARALSEILPDTKHCLCTWHLKQNGIKYLGNLMKDGSHFLTDFCKCMSKISEEDKFEDAWSQLISSYDVHENTWLISMYKIKEKWAWCSVKNHRTLGMRSTQLSESVNADVKRCTTPGLAINEFFTTFDKVVAEKRDKELKLEFDSRQQILRMVNQSAPILCQLVLTYTPDAFDMFQAQWDLQFSVMLSNRDEEGPSYVYTAHMIDEEGEWRVEFKPETYEICCTCRMFETTGILCCHALKVYESKDVRIMPKQYIIKRWTREARSDVVYDIGGSEIQVDPRLEIT 714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2485 714 SMART 26again6 650 677 IPR006564 GO:0008270
Prci11g2485 714 MobiDBLite consensus disorder prediction 104 127 - -
Prci11g2485 714 Pfam FAR1 DNA-binding domain 149 236 IPR004330 -
Prci11g2485 714 ProSiteProfiles Zinc finger SWIM-type profile. 639 675 IPR007527 GO:0008270
Prci11g2485 714 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 130 695 IPR031052 GO:0006355
Prci11g2485 714 Pfam SWIM zinc finger 649 674 IPR007527 GO:0008270
Prci11g2485 714 Pfam MULE transposase domain 358 452 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2485 Prci-Chr11 29939788 29942267 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci11g2485 MULE 8.1e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2485 - - pcin:129286451 1087.79