Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2482 ATGAGCACCGAGAGCTCAGCGGACAAAATGGTGAGTTTCAATAAGTGGAAAGATCCTAACTGTTGGTATAGATTAATGATTACCGTTCGATCATCCAGAATTCTTTCTTCCATCGGTTGGGTGGGATTTTGTTTCCTTTCTCCAAATTTTCCCGTGAAACTTCAGAGACGAACAGAGATGGACAACACAATCCAAAACACAAAAACAGAGCAAGAAAATGGAAGAAACTGCATTGAAACAGGGCAAGATGATGAAAGAAATTGCATCGAAATAGAGGAGGAAGAAGGAATAGAAGGATTGATGCAAGCTAGAGAAGAGGAGGAAGGAAGAAATGGATCGCTGCAACCTCAACAAGAGAAGGAAGGACAAAGACGGGACTTTATGATGGAGGATGAATTGAAACCCAAAATAGGAAGGGAGTTTGGAAGTTGGGAAGAGGCATGGGAATTTTGGCAAGAATATGCTAAAAACACTGGGTTTGAACCTAGAAAGTATAATGGTACAAATAGCAGAAAAGATGGTTCACTTATTACATATCGATATGTATGTTGTAAGGAAGGTTGTCGGAAAGAAGGTAAAAAGGAGACATATTCTTCCAAGTATCGGGCAGAGACAAGGACTAACTGTAAGGCAAGAATGATAGTGTCTTTTATTGATCAAAAGTATAAAATCACTAAATTTGATGAAGAGCATAATCATCCCTTGCACACACCAGCAACAAGGCACTTCTTAGCCTCTCAAAGAAATTTATCAGAAGTTGATGCTTATGGGATTGATTTGGCAAGAAAGTCTGGGCTCCAACAAAAAGCTACGTTTGACTTAATGAGTACATATGCTGAGGTGGACACAGAAGAACAAATCACCAATGTGTTTTGGGCAGATGCTGGAATGCTAATAGACTATGCACTTTTTGGTGAGGTCGTATCTCTAGACACAACATATTGCACAAATTGTGATCATCGACCTCTTGCAATCTTTTCTGGCTTTAATCATTATAGAAGTGCAGTCATTTTTGGAGTAGCATTATTGTATGATGAGACCACTATGTCTTTCAAGTGGCTATTAGAAACTTTCTTAGATGCTCATATGCAAAAGAAGCCTGAAACTGTGTTTACAGATCAAGATCAAGCTATGGCAAGAGCTTTAAGTGAAATTCTTCCTGACACAAAGCATTGTCTGTGTACTTGGCATTTAAAGCAAAATGGCATCAAATACTTGGGAAATTTAATGAAAGATGGATCACATTTTTTAACTGATTTCTGTAAATGCATGTCTAAAATTTCAGAAGAAGACAAGTTTGAAGACGCATGGAGCCAATTAATCTCTTCTTATGATGTCCATGAGAATACATGGTTGATATCCATGTATAAGATTAAAGAGAAATGGGCTTGGTGCTCTGTAAAAAATCATCGTACTCTAGGTATGAGAAGTACACAGCTTAGTGAAAGTGTGAATGCTGATGTAAAGAGATGCACAACACCGGGCTTAGCTATAAATGAATTCTTTACCACTTTTGACAAAGTTGTTGCAGAGAAGCGAGACAAGGAATTGAAGCTTGAGTTTGATTCTCGACAACAAATATTGCGCCAACTTGTGCTAACTTATACCCCCGATGCCTTTGACATGTTCCAAGCACAATGGATCTCCAATTCTCTGTGA 1659 0.384 MSTESSADKMVSFNKWKDPNCWYRLMITVRSSRILSSIGWVGFCFLSPNFPVKLQRRTEMDNTIQNTKTEQENGRNCIETGQDDERNCIEIEEEEGIEGLMQAREEEEGRNGSLQPQQEKEGQRRDFMMEDELKPKIGREFGSWEEAWEFWQEYAKNTGFEPRKYNGTNSRKDGSLITYRYVCCKEGCRKEGKKETYSSKYRAETRTNCKARMIVSFIDQKYKITKFDEEHNHPLHTPATRHFLASQRNLSEVDAYGIDLARKSGLQQKATFDLMSTYAEVDTEEQITNVFWADAGMLIDYALFGEVVSLDTTYCTNCDHRPLAIFSGFNHYRSAVIFGVALLYDETTMSFKWLLETFLDAHMQKKPETVFTDQDQAMARALSEILPDTKHCLCTWHLKQNGIKYLGNLMKDGSHFLTDFCKCMSKISEEDKFEDAWSQLISSYDVHENTWLISMYKIKEKWAWCSVKNHRTLGMRSTQLSESVNADVKRCTTPGLAINEFFTTFDKVVAEKRDKELKLEFDSRQQILRQLVLTYTPDAFDMFQAQWISNSL 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2482 552 MobiDBLite consensus disorder prediction 104 127 - -
Prci11g2482 552 Pfam FAR1 DNA-binding domain 149 236 IPR004330 -
Prci11g2482 552 Pfam MULE transposase domain 307 401 IPR018289 -
Prci11g2482 552 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 130 546 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2482 Prci-Chr11 29888322 29890468 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci11g2482 MULE 5.5e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2482 - - pcin:129286451 1129.39