Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2469 ATGTTTTCAAGAGTGGTTCCAGGATGCTTTGGGAATACTTCCCTACAGAAGTTAGATTTTAGCTCAAACAAATTGATTTCTCATATACCCTCTTCTCTTCGGAGTCTCAAAGATATCTTGATCTTAGACATATCATCCAATGAATTGAGTGGGACAATTTCACCAGAGGTATCAAACTTGAGAACAATTATACTATTGGACTTATCAAGAAATCAAATTTCAGGAAGCATCCCTAAAAGTATGGGTAGTTTGCAAACTTTGCAGAACTTATCTTTGGCCCATAACAAATTACAATGGCCTATTCCTGAATTGCTTGGTGGCAAGATAAACAAAGAGTTCTTGGATATTTCTGAAAATTATTTTTCAGATGTCATACAAGGGTTGAAAATAATGATTGATGTGGCAACTGCTTTAGAGTATCTTCATCATGATTCTTCTACACAAGTTGTTCATTGTGATGTGAAACCAAACAATGTTTTGTTGGATGAAGATATGGTGGCTCATCTTAGTGATTTTGGCATTGCTAAATTGTTTGGAGAAGGACAATTGAAAAGTTATACCAAAACTTTGGCTACAATTGGATATATGGCCCTAGAATATGGATCTAAAGGAGTTGTTACTGTCAAAGGAGATGTGTATAGTTATAGTATTTTGCTAATGGAAATCTTTACAAGAAGCTGA 681 0.3465 MFSRVVPGCFGNTSLQKLDFSSNKLISHIPSSLRSLKDILILDISSNELSGTISPEVSNLRTIILLDLSRNQISGSIPKSMGSLQTLQNLSLAHNKLQWPIPELLGGKINKEFLDISENYFSDVIQGLKIMIDVATALEYLHHDSSTQVVHCDVKPNNVLLDEDMVAHLSDFGIAKLFGEGQLKSYTKTLATIGYMALEYGSKGVVTVKGDVYSYSILLMEIFTRS 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2469 226 ProSitePatterns Serine/Threonine protein kinases active-site signature. 149 161 IPR008271 GO:0004672|GO:0006468
Prci11g2469 226 SUPERFAMILY Protein kinase-like (PK-like) 122 225 IPR011009 -
Prci11g2469 226 PANTHER OS04G0122200 PROTEIN 125 225 - -
Prci11g2469 226 Pfam Protein tyrosine and serine/threonine kinase 112 225 IPR001245 GO:0004672|GO:0006468
Prci11g2469 226 Gene3D Transferase(Phosphotransferase) domain 1 111 226 - -
Prci11g2469 226 SUPERFAMILY L domain-like 6 125 - -
Prci11g2469 226 ProSiteProfiles Protein kinase domain profile. 1 226 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2469 226 Gene3D Ribonuclease Inhibitor 12 103 IPR032675 -
Prci11g2469 226 FunFam Os07g0541700 protein 106 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2469 Prci-Chr11 29414550 29416094 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2469 126 224 Receptor kinase-like Gene Family AT5G20480 48.571 3.31e-27 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci11g2469 PK_Tyr_Ser-Thr 1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2469 - - pcin:129285570 255.758