Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2468 ATGTGCCATCGACTGCCTTTACTCGAAATCTTTGATGTTGTGAGTAATCAATTTGAGGGAAGCATTCCAAAATCAATAAATAATTGCACATTTTTAAAGGAATTGTGTTTGGATAATAACTCATTTACAGGTTTTGTACATAAAGGCATAGGCGAACTTAATAACCTTAATATCTTAGACTTGAGCAGTAATCATTTAAAAGGAGCAATTCCTTCCAATATATTCAACATTTCAACATTGACAATTTTACAGCTTTCTGCTGCTTTGGAGTATCTTCATCACGGTTCTGCGACACTTGTTGTTCACTGTGATGTGAAACCAAGCAATGTTTTGTTGGATGAAGATATGGTAGCTCATCTTAGTGATTTTGGTATTGCTACATTGTTTGGTGAAGGACAACAGGAAATTTATACAAAAACTCTGGGTACAATTGGCTATATGGCACCGGAGTATGGATCGAAAGGAGTTGTTTCAATCAAAGGAGATGTGTATAGTTATGGTATTTTGCTAATGGAAATCTTTACAAGGAAGAAGCCGACACATCAGATGTTTGTTCAAGGATTAAGTTTGAGAGATTGGGTGAGAAAATCAACATCACACTCAATCTTTAGCATTATAGATGCCAATTTGCTGCACAAAGAAAATCAAAATACTAATAATATATTACCACATATATCATCAGTTTTTGAGTTAGCATTAAATTGTTGCATTGATTTACTTGACGCAAGACTTACTATGACTGATGTTGTTGTATCATTGAAAAAAAATCAAGGCTTCGCTTCAAGAAAATGTTGGGACCCTACTAGTTGA 810 0.3432 MCHRLPLLEIFDVVSNQFEGSIPKSINNCTFLKELCLDNNSFTGFVHKGIGELNNLNILDLSSNHLKGAIPSNIFNISTLTILQLSAALEYLHHGSATLVVHCDVKPSNVLLDEDMVAHLSDFGIATLFGEGQQEIYTKTLGTIGYMAPEYGSKGVVSIKGDVYSYGILLMEIFTRKKPTHQMFVQGLSLRDWVRKSTSHSIFSIIDANLLHKENQNTNNILPHISSVFELALNCCIDLLDARLTMTDVVVSLKKNQGFASRKCWDPTS 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2468 269 Pfam Protein kinase domain 81 250 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2468 269 SUPERFAMILY L domain-like 4 86 - -
Prci11g2468 269 Gene3D Ribonuclease Inhibitor 2 79 IPR032675 -
Prci11g2468 269 SUPERFAMILY Protein kinase-like (PK-like) 81 253 IPR011009 -
Prci11g2468 269 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 2 89 - -
Prci11g2468 269 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 8 86 - -
Prci11g2468 269 ProSiteProfiles Protein kinase domain profile. 1 259 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2468 269 Gene3D Transferase(Phosphotransferase) domain 1 80 264 - -
Prci11g2468 269 SMART serkin_6 8 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2468 269 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 71 263 - -
Prci11g2468 269 ProSitePatterns Serine/Threonine protein kinases active-site signature. 100 112 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2468 Prci-Chr11 29387228 29394472 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2468 17 87 Receptor kinase-like Gene Family AT3G47570 39.437 1.66e-07 50.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci11g2468 Pkinase 3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2468 - K13420 pcin:129284864 538.495