Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2460 ATGCACTCTCTCCAGATTTTCCTCTTTCTTGTGGCGGTGATAGAAGGAGTACTAACACCGCCGCCGCCACTTCTCCTTCCTCTACCACCCATAATAGCCGATGATAAGTCTCCTAGCAATTACAATGAAGATGGTGGTGGGTGCGCTTCTGACGAGGTTCTTGGTGGTTTTAGTTATGGCGGGAGTTTTGTACCTAGAGGCATTGGTGAACTTGAGAACCTTAATCTCTTAGACTTGAGCCAAAATTATTTGAAAGGAGCAATTCCTTCCAATATATTCAATATTTCCACGTTGACACTTTTGAACCTTGGTGGTAATTTCCTCTACAGCACTCTCCCATCATATTTAGGAATTGGCATTCCCAACTTGAGATTTGTATGGAATGATTTGAGTGGGTTAATTCCTGATACAGTTAACAAATTACATGGTCTTCAATGTTTAAGCCTCAGTAGCAACAGATTGTATGGGTCCATCATAAATGAACTTTGCCAACTCAAAAGTCCAAGTGAGTTGTATCTTGCCAACAACATGTTTTATGGAGTGGTTCTAGGATGCCTTGGGAATACTTCTCTACGGAAGTTGGATTTGAGCTCTAACAAATTGATTTCTCATATTCGCTCTTCTCTTTGGAGTCTCAAAGATATCTTGGTCTTAGACATATCCTCCAATGCATTGAGTGGAATAATTTCACCAGAATCACAATTTCAAGTTCACCCATATAGGAAAGAACACAAGCACATGTCAAATAAATTGAAGCTAGTGATAAAGTGCTCATTGCCTATCATATACATGGTTGTCATTTTGGTTGTTTCAGGCATTGTCTTTCTAAAGTGTAAGAGAGATCATATTAATGATTCAACCAAGAGGGATTTAATAAATTTTGAGACATCAATTAGGATATCCTATTATGAGCTTTGGCAAGGAACAAATGGATTTAATGAGAGTAATCTTCTGGGCTTTGGAAGTTTTGGATTAGTATACAAAGCAACTCTTTCAAACTCAAAAATAGTTGCTGTCAAAGTATTTAAGTTAGAAATGGAAGAAGCATTAAGAAGCTTTGATATTGAATGTGCTACCATGTGCAATTTATGCCATCACAATCTCATTAAGGTCATTAGTTGTTGCTCAAATGATCATTTCAAATCTCTGATAATGGAATTCATGGAAAATGGGACTCTAGACAAATGGTTATACTCTCATAACTATTATTTAAATGTCTTGCAAAGGTTGAACATAATGATTGATGTGGCAGTTACTTTGGAGTATCTTCATCACGGTTGTTCAACACTAGTTGTTTATTGTGATGTGAAACCAAACAATGTTTTATTGGATGAAGATATGGCAGCTCATCTTAGTGATTTTGGTATTGCTAAATTTTTTGGTGAAGGACAACCAGAAATTTATACCAAACTTTGGCTACAATTGGCTTATAGCACCAGGTAA 1443 0.368 MHSLQIFLFLVAVIEGVLTPPPPLLLPLPPIIADDKSPSNYNEDGGGCASDEVLGGFSYGGSFVPRGIGELENLNLLDLSQNYLKGAIPSNIFNISTLTLLNLGGNFLYSTLPSYLGIGIPNLRFVWNDLSGLIPDTVNKLHGLQCLSLSSNRLYGSIINELCQLKSPSELYLANNMFYGVVLGCLGNTSLRKLDLSSNKLISHIRSSLWSLKDILVLDISSNALSGIISPESQFQVHPYRKEHKHMSNKLKLVIKCSLPIIYMVVILVVSGIVFLKCKRDHINDSTKRDLINFETSIRISYYELWQGTNGFNESNLLGFGSFGLVYKATLSNSKIVAVKVFKLEMEEALRSFDIECATMCNLCHHNLIKVISCCSNDHFKSLIMEFMENGTLDKWLYSHNYYLNVLQRLNIMIDVAVTLEYLHHGCSTLVVYCDVKPNNVLLDEDMAAHLSDFGIAKFFGEGQPEIYTKLWLQLAYSTR 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2460 480 Gene3D Phosphorylase Kinase; domain 1 275 387 - -
Prci11g2460 480 SMART serkin_6 312 473 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2460 480 ProSiteProfiles Protein kinase domain profile. 312 480 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2460 480 Gene3D Ribonuclease Inhibitor 54 122 IPR032675 -
Prci11g2460 480 Gene3D Transferase(Phosphotransferase) domain 1 388 478 - -
Prci11g2460 480 SUPERFAMILY L domain-like 63 403 - -
Prci11g2460 480 ProSiteProfiles Leucine-rich repeat profile. 190 213 IPR001611 GO:0005515
Prci11g2460 480 Pfam Protein kinase domain 313 469 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2460 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 431 443 IPR008271 GO:0004672|GO:0006468
Prci11g2460 480 Gene3D Ribonuclease Inhibitor 123 256 IPR032675 -
Prci11g2460 480 ProSitePatterns Protein kinases ATP-binding region signature. 318 340 IPR017441 GO:0005524
Prci11g2460 480 PANTHER OS04G0122200 PROTEIN 126 232 - -
Prci11g2460 480 SUPERFAMILY Protein kinase-like (PK-like) 294 467 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2460 Prci-Chr11 29092920 29095745 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2460 64 460 Receptor kinase-like Gene Family AT3G47570 34.091 5.40e-64 222
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci11g2460 Pkinase 5.3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2460 - - pcin:129286434 939.102