Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2454 ATGGGTGTTAATCCCTCAATGCACCAGACTTGCAATTTTGATGAGTCTAATATGCTAAACATGGCAAAACCTTCTTCCTTTGTTTTCCTCTTCTCACTCCATTGCCTCGTGGCCTCCTTAGCTTGGACCAAAACAAACATCACCACCGACAAATATGCACTTCTTGCCCTTAAATCCTCTATCACTTCAGATCCATACAATTTCTTAGCTAATTGGTCTATCTCTTCTTCTCCATGCGATTGGGTTGGTGTCACCTGCAATACTCATCATGAAAGGGTCCACTCTTTGAATCTTGCTGGCATGGATCTTACAGGCACCATATCTCCACCATTGGGAAATCTCTCATTCCTTGTTGAACTTGATCAACTTGATCTCAGAATCATTCCAAGTGCCATTGGAAATGTGACCAACCTTCAATCATTATATCTTGCCAACAGCAACTTACAAGGTTGTATACCCAAAGACATTGGCAATCTCCATAAACTTGAATTATTAGATATATATGACAATTATATTGGAGGACCTTTTCCTTCCAGAAAGGTACCAGGGTGTCTTGGGAATAGTTCTTTGTGGAAGTTGGATTTCAGCTCTAACAAATTGACTTCTCCTCTGCCCTCTTCTCTTTGGAGTATGGAAGATATCTTGGTCTTAGACTTATCCTCCAATGCAATAAGCGGAACAATTCCATCTGATGTGTCAAACCTAAGGGCCATTATACATAAGAGAGATGTTAATGGTTTAACCAATAAGGATTTAATTAATTTGGAGACACCAATTAGGATATCCTATTATGAGCTTCTACGAGGAACAAATGGATTTGATGAGAGAAATCTCCTTGGCTTTGGAAGTTATGGATCAGTATACAAAGCAAATCTGTCAAGTGAAAAAATAGTTGCTGTTAAAGTATTTAACTCAGACTTGGAAGAAGCATTGAGGAGTTTTGATATTGAATGTGATGCATTATGCAATTTTTGTCATCGCAATCTTGTTAAGATCATAAGCACTTGTTCAAAATATGATTTTAAATCTATAATCATGGAGTTCATGCCAAACAGGAGTCTTGATAGATGGTTGTACTCTCATAGACATTGTTTAGATATTTTGCAAAGGCTGAATATATTGATTGATGTAGAAGCTGCATTAGAATATCTTCATCATGGTTCATCTAAATCAGTTGTTCACTGTTTTGTAAAACTGAGTAATGTATTATTGGATGAAGATATGGTGGCTCATCTTAGTGATTTTGGTATTGCCAAATTGTTAGGGGAAGGATAA 1275 0.371 MGVNPSMHQTCNFDESNMLNMAKPSSFVFLFSLHCLVASLAWTKTNITTDKYALLALKSSITSDPYNFLANWSISSSPCDWVGVTCNTHHERVHSLNLAGMDLTGTISPPLGNLSFLVELDQLDLRIIPSAIGNVTNLQSLYLANSNLQGCIPKDIGNLHKLELLDIYDNYIGGPFPSRKVPGCLGNSSLWKLDFSSNKLTSPLPSSLWSMEDILVLDLSSNAISGTIPSDVSNLRAIIHKRDVNGLTNKDLINLETPIRISYYELLRGTNGFDERNLLGFGSYGSVYKANLSSEKIVAVKVFNSDLEEALRSFDIECDALCNFCHRNLVKIISTCSKYDFKSIIMEFMPNRSLDRWLYSHRHCLDILQRLNILIDVEAALEYLHHGSSKSVVHCFVKLSNVLLDEDMVAHLSDFGIAKLLGEG 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2454 424 Gene3D Phosphorylase Kinase; domain 1 256 348 - -
Prci11g2454 424 SUPERFAMILY Protein kinase-like (PK-like) 255 422 IPR011009 -
Prci11g2454 424 Gene3D Ribonuclease Inhibitor 183 255 IPR032675 -
Prci11g2454 424 PANTHER OS04G0122200 PROTEIN 128 239 - -
Prci11g2454 424 Pfam Leucine rich repeat N-terminal domain 49 87 IPR013210 -
Prci11g2454 424 SUPERFAMILY L domain-like 48 236 - -
Prci11g2454 424 FunFam Nuclear pore complex protein NUP107 47 181 - -
Prci11g2454 424 ProSitePatterns Protein kinases ATP-binding region signature. 279 301 IPR017441 GO:0005524
Prci11g2454 424 Gene3D Ribonuclease Inhibitor 46 182 IPR032675 -
Prci11g2454 424 Pfam Protein kinase domain 275 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2454 424 ProSiteProfiles Protein kinase domain profile. 273 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2454 424 Gene3D Transferase(Phosphotransferase) domain 1 349 424 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2454 Prci-Chr11 28776979 28785936 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2454 91 421 Receptor kinase-like Gene Family AT3G47570 34.190 4.72e-47 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci11g2454 Pkinase 5e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2454 - - pcin:129286431 858.981