Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2452 ATGGAAAAATCTCCTTCCTTTGCTTTCCTCATGTTCTCACTCCATTGCTTCATATCCTCCTTAGCTTTGATTGATACAAACATCACCACTGATAAATCTACCCTTCTTGGCCTTAAATCCTTTATCACTTCAGATCCATATGATTCCTTATCTACTTGGTGTATCTCTTCTTCTCCATGCAATTGGGTTGGTGTCACCTGCAATACTCGCCATGGAAGGGTCCATTCCTTGAATCTAGGTGGCATGGATCTCAAAGGCACCATATCTAAACTATTGGGAAATCTCTCATTTCTTGTTGAACTTGATCTTAGTAGCAACAACTTTTATGGTGAAATACCAAGAGAGTTAGTTCAATTGCGTAGATTGAAACAACTGAACTTGAGCTTCAATGACTTTCATGGAAAAGTTCCAGCATGGATAGGAGATTTATCTACATTGGAGCACCTAAATCTTCAAAATAATGATTGGAATTTTAATTTAATTGAAGGAATCATTCCTATTGAGGTAGGAAGACTTGAGCGTTTGAAGGTTTTACGATTGGCGGGTAACAAGCTTTCGGGAATCATTCCCCAAATGATTTCCAACTTATCATCACTTGAATTACTGAGTTTGTCTTCTAATACTTTGTCAGGAGGCATTCCAAATGAGATTGGTCATCTTCCACAGCTACAGATAATATATCTTGGAAATAATCAGCTTTCAGGCTCGATACCAACCTCATTACTTAACAGTTCGATGCGACGACAAATTGATCTTGGAATAAATCAATTGTCAGGGAGTATCACAACAAATGTGTGTCTTGGGCTACCAAAACTTGAATTATTTTCTGTGGATAGAAATGATTTGTCTGGTGAAATACCCTCCATTTGGCATCAATGCAAAGAATTGGCAATGTTACAGTTAGGTGATAACATGTTCAACCTAGGAATCATTCCAAGTGATATTGGAAATTTGACAAACCTCCAACGCTTGTATCTTCCCTACAGCAATTTGCAAGGTTTTATACCCATGGAAATGGGCAATCTTGATAAACTCAATGTCTTGGCCTTGCCCTTTAATTATTTCAAAGGGCGTATTCCTTTCAATATTTTCAACATTTCAACATTGACTCGCTTACACCTTGACCAGAATTCCCTCTCCGGCCTTCTCCCATCATATTTAGGAATTGGCCTTCCCAACTTGAAAGAATTACAATTGGCAGGGAATGAACTTACTGGACAAATTCCAAATAGCATATCAAATTCTTCTAATCTCATTTTGTTAGATTTGTCATTGAATAAATTTAGTGGGGTTATACCCATTGTATTTGGAAATCTAACAAAATTGATGACGCTATCTTTGCATGGGAATTATTTGAATGGGTTGATTCCTGATATAGTTAGCAAATTACATAGCCTCCAGTTTTTAAGTCTTAGCAACAACAGATTGCAAGGGTCCATTATAGATGAACTTTGCCAACTCAAAAGTTTAAGTGAGTTGTATCTTGCCAACAATATGTTTTTGGGGGTGGTTCCCGGATGCTTCGGGAATACTTCTTTGCGGAAGTTGAATTTTAGCTATAACAACTTGATTTCTCATATACCCTCTTCTCTTTGGAGTCTCAAAGATATCTTGGTATTAGACATATCATCCAATGAATTAAGTGGGACAATTTCACTAGAGGTATCAAACTTGAGAACAATTACACTATTGAACTTGTCAAGAAATAATATTTCAGGAAGCATCCCTACAACTATGGGTAGCCTACAAACTTTACAAACCCTATCTTTGTCCCAAAACAAATTACAAGGGAATATTCCTAAATCACTTGGTGGCATGATAAGCATGGTGACTTTGGATCTTTCCCATAATTATTTGTCTGGTGTGATTCCAAAATCCTTAGAATTACTTGCCTATCTTCAACATATTATTCTTTCTTATAATTTACTGCAAGGAGAAATTCCAAATGGGGGGCCTTTCCAGAATTTCACTGCTGAATCTTTTATGATGAATAATGATCTTTGTGGGAAGTCCCAATTACAAGTTCATCCATGTAGGAAAGAACACAAGCACATGTCAAATAAAGTGAAGCTATTGATAAAGTGCTTATTGCCTATCATATGCATGGTTGCCATTTTGGTTTTTTCAAGCATTGTCTTTCTAAAGTGTAAGAGAGATCATGTTCATGATTCAACCAAAAGGGGTTTAATAAATTTTGAGACACCACCTAGGATATCCTATTATGAGCTCTGGCAAGGAACAAATGGATTTGATGAGAGTAATCTTCTTGGCTCTGGAAGTTTTGGATTAGTATACAAAGCAACTCTTCCAAACACAAAAATGGTTGCTGTCAAAGTATTCAAGTTAGAAGTTGAAGAAGCATTAAGAAGTTTTGATATTGAATGTGCTGTCATGTGTAATTTACGCCATCGCAATCTCATTAAGACCACTAGTTGTTGCTCAAATGATCATTTCAAATCTCTAATAATGGAATACATGGCAAATGGGAGTCTTGACAAATGGTTGTACTCTCATAACTATTGTTTAGATGTCTTGCAAAGGTTGAACATAATGATTGATGTGGCATTTGCTTTGGAATACCTTCACCATAGTTCTTCTATACTAGTTGTTCATTGTGATGTGAAACCAAGCAATGTTTTGCTTGATGAAGATATGGTGGCACATCTTAGTGATTTTGGTATTGCTAGATTGTTTGGTGAAGGACAATGGGAAATTTATACCAAAACTTTGGCTACAATTGGTTATGTGGCACCAGAATATGGATCAAAAGGACTTGTTTCTGTCAAAGGAGATGTGTATAGTTATGGTATTTTATTAATGGAAATGTTTACAAGGAAGAAGCCAACAGATGAGATGTTTGTTGAAGGATTAAGTTTGAAGCATTGGGTTAGCAAATCAACACCACATTCAATCACCAATATTCTAGATGCCAATTTGCTACATAGAGAACATCAAAATATTGATAATATATTACCTCATATATCATCAGTTTTTGAGCTAGCACTGAATTGTTGCCATGACTTACCTGAGGCGCGACTTTCAATGGCTGATGTTGTGGTGTCATTAAAAAAAATCAAGGTTATATTTGTGAAAAATGTTAGAGGAGCTTCAAGTTGA 3117 0.3612 MEKSPSFAFLMFSLHCFISSLALIDTNITTDKSTLLGLKSFITSDPYDSLSTWCISSSPCNWVGVTCNTRHGRVHSLNLGGMDLKGTISKLLGNLSFLVELDLSSNNFYGEIPRELVQLRRLKQLNLSFNDFHGKVPAWIGDLSTLEHLNLQNNDWNFNLIEGIIPIEVGRLERLKVLRLAGNKLSGIIPQMISNLSSLELLSLSSNTLSGGIPNEIGHLPQLQIIYLGNNQLSGSIPTSLLNSSMRRQIDLGINQLSGSITTNVCLGLPKLELFSVDRNDLSGEIPSIWHQCKELAMLQLGDNMFNLGIIPSDIGNLTNLQRLYLPYSNLQGFIPMEMGNLDKLNVLALPFNYFKGRIPFNIFNISTLTRLHLDQNSLSGLLPSYLGIGLPNLKELQLAGNELTGQIPNSISNSSNLILLDLSLNKFSGVIPIVFGNLTKLMTLSLHGNYLNGLIPDIVSKLHSLQFLSLSNNRLQGSIIDELCQLKSLSELYLANNMFLGVVPGCFGNTSLRKLNFSYNNLISHIPSSLWSLKDILVLDISSNELSGTISLEVSNLRTITLLNLSRNNISGSIPTTMGSLQTLQTLSLSQNKLQGNIPKSLGGMISMVTLDLSHNYLSGVIPKSLELLAYLQHIILSYNLLQGEIPNGGPFQNFTAESFMMNNDLCGKSQLQVHPCRKEHKHMSNKVKLLIKCLLPIICMVAILVFSSIVFLKCKRDHVHDSTKRGLINFETPPRISYYELWQGTNGFDESNLLGSGSFGLVYKATLPNTKMVAVKVFKLEVEEALRSFDIECAVMCNLRHRNLIKTTSCCSNDHFKSLIMEYMANGSLDKWLYSHNYCLDVLQRLNIMIDVAFALEYLHHSSSILVVHCDVKPSNVLLDEDMVAHLSDFGIARLFGEGQWEIYTKTLATIGYVAPEYGSKGLVSVKGDVYSYGILLMEMFTRKKPTDEMFVEGLSLKHWVSKSTPHSITNILDANLLHREHQNIDNILPHISSVFELALNCCHDLPEARLSMADVVVSLKKIKVIFVKNVRGASS 1038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2452 1038 ProSitePatterns Serine/Threonine protein kinases active-site signature. 869 881 IPR008271 GO:0004672|GO:0006468
Prci11g2452 1038 SMART serkin_6 750 1029 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2452 1038 SUPERFAMILY L domain-like 29 360 - -
Prci11g2452 1038 Gene3D Phosphorylase Kinase; domain 1 713 825 - -
Prci11g2452 1038 PANTHER RECEPTOR-LIKE PROTEIN 55 393 1026 - -
Prci11g2452 1038 Pfam Leucine rich repeat 174 233 IPR001611 GO:0005515
Prci11g2452 1038 Pfam Leucine rich repeat 584 643 IPR001611 GO:0005515
Prci11g2452 1038 Pfam Leucine rich repeat 417 476 IPR001611 GO:0005515
Prci11g2452 1038 Pfam Leucine rich repeat 489 547 IPR001611 GO:0005515
Prci11g2452 1038 SUPERFAMILY L domain-like 359 688 - -
Prci11g2452 1038 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 292 383 - -
Prci11g2452 1038 Gene3D Transferase(Phosphotransferase) domain 1 826 1033 - -
Prci11g2452 1038 SUPERFAMILY Protein kinase-like (PK-like) 732 1022 IPR011009 -
Prci11g2452 1038 FunFam Leucine-rich repeat receptor protein kinase EMS1 157 240 - -
Prci11g2452 1038 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 826 1034 - -
Prci11g2452 1038 Pfam Leucine rich repeat N-terminal domain 30 68 IPR013210 -
Prci11g2452 1038 ProSiteProfiles Protein kinase domain profile. 750 1030 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2452 1038 FunFam Inactive leucine-rich repeat receptor-like protein kinase 389 679 - -
Prci11g2452 1038 Gene3D Ribonuclease Inhibitor 27 158 IPR032675 -
Prci11g2452 1038 Gene3D Ribonuclease Inhibitor 159 267 IPR032675 -
Prci11g2452 1038 Pfam Protein kinase domain 751 1019 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2452 1038 SMART LRR_typ_2 172 195 IPR003591 -
Prci11g2452 1038 SMART LRR_typ_2 582 605 IPR003591 -
Prci11g2452 1038 SMART LRR_typ_2 196 219 IPR003591 -
Prci11g2452 1038 SMART LRR_typ_2 487 510 IPR003591 -
Prci11g2452 1038 SMART LRR_typ_2 95 119 IPR003591 -
Prci11g2452 1038 SMART LRR_typ_2 439 462 IPR003591 -
Prci11g2452 1038 SMART LRR_typ_2 511 534 IPR003591 -
Prci11g2452 1038 SMART LRR_typ_2 463 486 IPR003591 -
Prci11g2452 1038 SMART LRR_typ_2 391 415 IPR003591 -
Prci11g2452 1038 SMART LRR_typ_2 220 244 IPR003591 -
Prci11g2452 1038 SMART LRR_typ_2 606 629 IPR003591 -
Prci11g2452 1038 FunFam Nuclear pore complex protein NUP107 28 156 - -
Prci11g2452 1038 ProSitePatterns Protein kinases ATP-binding region signature. 756 778 IPR017441 GO:0005524
Prci11g2452 1038 Gene3D Ribonuclease Inhibitor 269 680 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2452 Prci-Chr11 28691480 28702707 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2452 30 1034 Receptor kinase-like Gene Family AT3G47570 35.448 2.91e-172 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Prci11g2452 Pkinase 1.6e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2452 - K13420 pcin:129285519 1213.36