Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2435 ATGGGATTCAAAATCAGAAGTCTCAGCTTGGTAAATCTTTTTCTTGTGCTTTCCCATTTCCATTTGGGTTTGAGCTTTGCATTGAACACCATCACCTCAGGTCACTTCATCAGAGACCATGAAACAGTGAGCTCCAATAGCAGTGACTTCAAGCTTGGATTCTTCAGCCCTCAAAATTCGACAAACCGCTACGTAGGAATCTGGTATCTTTCTGAATCTAACATCATCTGGGTAGCTAATAGAAACCAGCCAGTGGTTGATGCTTTTGGGACTGTCACAATCTCCAAGGACGGGAATCTTGTGGTATTGGACAAACAGAATATTAGTGTCTGGTCCTCAAATGTTTCAAACATTGCAACTAATTCAATTGCAAAACTTTTGAACACTGGGAATCTAGTCCTCTCTGATAACAGCACAGGAGAAACTATTTGGGAGAGTTTCCAAGATCCTTCTAATCTTCTAGTTCCAAAAATGAAGCTCAGCATTAACAAAAGAACTGGAGAGAAGGTGAAACTTACGTCATGGAAAAGCCTTTCTGATCCATCTATTGGAAACTATTCTGCTTCTATTGAACGCCCAGATGCTCCCGATGTCTTTCTCTGGTTTAATGGAACTCGCCCGTATGCTCGAACCGGTCCATGGAATGGTAAGATTTTTATAGGGTCACCCACAATGTCAACTGGGTATCTTTATGGATGGAGTGTTGGGGAGGAAGATGGTGGAACTATTTATGTAACATTTAATTCTGCAAATGATACTACCTTTGCAGTTCTTGGCTTGAATCCACAAGGCCAACTTTGGACGGTATGGTGGAACAACAAAAAGGAAGTTTTGAGGAAGGTGATTAATGGCACTTACTGTGATCTATATGGCATATGTGGGGCATTTGGAAGCTGTAATTCACAAAGTTCACCGATTTGTAGCTGTTTGAATGGGTATGTACCAAAGAATTTAGAGGAATGGAATACGCAAAATTGGACTAGTGGATGCGTGAGGAAGAAGCCATTTCAATGTGAGGGGATTGCAAATAGAAGTGAAATGGAAGAAAAAGATGGGTTTGTGAGACTTGAGAACATGAAAGTGCCAGACTTTTTGGAGAGGTCAACTGCAACAGAAGATAATTGTAGAACACAGTGTCTGGATAATTGCTGTGTGGCATATGCATATGATTCAAATGGCATTGGTTGCATGCATTGGAGTGGAGATTTGATTGACATACAAAGATTCTCAAGTGGAGGGGTTGATCTTTACATTCGTGTGCCTTTGTCTGAACTTGAAAAACATTCACAAAAAAGAACAATCATCATTGCAGTTGCAGTGACAATAGGAATTATTACTTTAACAGCATGTGCATATCTCTTATGGAAATTATTGACCGTTAATAAATATGCAGGTGGGATAGATTCACACAATCAGTCTCAGAGAATGATTAGACAAGATGAAGTCAATATGGATGAGCTTCCACTTTTTGATTTTGAAGAGCTTCTAAATGCTACGAACAACTTTCACTCATCAAACATGCTTGGACGTGGTGGTTTCGGTTCAGTATACAAGGGGCAATTGAAAGATGGACAACAAATTGCAATCAAAAGACTTTCAAAAGCATCACGACAAGGGCAAGAAGAGTTCATGAATGAGGTTGTTGTGATTTCAAAGCTTCAACATCGCAATCTAGTGAGGCTTTTAGGCTGTTGCATTCAGCAAACTGAAAGGATATTAATCTATGAGTACATGCATAACAAGAGTTTGGATGCAATTCTATTTGATTCAATCAAAAAGAAAGAATTAGATTGGCAAAAACGCTTCACAATTATTGAAGGAATATCTAGAGGTTTGCTTTATCTCCATCGAGATTCTAGAATAAAAATCATACATAGAGATTTAAAGGCTAGTAACATCTTGTTGGATGAAGAGTTAAATCCAAAAATATCAGATTTTGGTATAGCTAGAATATTTAGAAGCAATGAAGAGCAAGCTAATACTAGAAGGGTGGCTGGGACATATGGCTATATATCTCCAGAATATGCAATGCAAGGGCAATTTTCAGAGAAATCAGATGTTTTTAGTTTTGGAGTTCTCATGCTAGAGATTGTTAGTGGAAGAAGCAACTCTAGATTGAATAACGTGGAGGGATCTCAAACCCTATTAGGATATGTAAGTATCTTTTGTACTTATTATTGTTGTAGATATAAGCTATCTAGTTTCATGCATGGATTTTTTTTATATTTTCAGGTGTGGAAGCTATGGAAGGAAGATAACCTTGTGTCCTTTATAGATTTAGAAATGCAGCATCAAGGTTCTTGTGAGGATATTTTACGATGTGTACACATAGGACTGCTTTGTGTGCAAGAATTAGTGAAAGAGAGGCCAACTATGGCCAATGTAGTGTCTATGCTTAGTAGTGAAATTGCCAATCTTCCTCTTCCAAGGCAACCTGCATATATACTAAACGAGACAGGGTTCAATTTTGAGCCTGCTTCAGAAGCACAGAGTTCACACTCTGCTAACTTTGTTAGCATTACTAGCATAACTGGAAGATAG 2541 0.3841 MGFKIRSLSLVNLFLVLSHFHLGLSFALNTITSGHFIRDHETVSSNSSDFKLGFFSPQNSTNRYVGIWYLSESNIIWVANRNQPVVDAFGTVTISKDGNLVVLDKQNISVWSSNVSNIATNSIAKLLNTGNLVLSDNSTGETIWESFQDPSNLLVPKMKLSINKRTGEKVKLTSWKSLSDPSIGNYSASIERPDAPDVFLWFNGTRPYARTGPWNGKIFIGSPTMSTGYLYGWSVGEEDGGTIYVTFNSANDTTFAVLGLNPQGQLWTVWWNNKKEVLRKVINGTYCDLYGICGAFGSCNSQSSPICSCLNGYVPKNLEEWNTQNWTSGCVRKKPFQCEGIANRSEMEEKDGFVRLENMKVPDFLERSTATEDNCRTQCLDNCCVAYAYDSNGIGCMHWSGDLIDIQRFSSGGVDLYIRVPLSELEKHSQKRTIIIAVAVTIGIITLTACAYLLWKLLTVNKYAGGIDSHNQSQRMIRQDEVNMDELPLFDFEELLNATNNFHSSNMLGRGGFGSVYKGQLKDGQQIAIKRLSKASRQGQEEFMNEVVVISKLQHRNLVRLLGCCIQQTERILIYEYMHNKSLDAILFDSIKKKELDWQKRFTIIEGISRGLLYLHRDSRIKIIHRDLKASNILLDEELNPKISDFGIARIFRSNEEQANTRRVAGTYGYISPEYAMQGQFSEKSDVFSFGVLMLEIVSGRSNSRLNNVEGSQTLLGYVSIFCTYYCCRYKLSSFMHGFFLYFQVWKLWKEDNLVSFIDLEMQHQGSCEDILRCVHIGLLCVQELVKERPTMANVVSMLSSEIANLPLPRQPAYILNETGFNFEPASEAQSSHSANFVSITSITGR 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2435 846 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 181 IPR036426 -
Prci11g2435 846 PIRSF SRK 3 846 IPR024171 GO:0004674
Prci11g2435 846 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 17 790 - -
Prci11g2435 846 Pfam D-mannose binding lectin 75 176 IPR001480 -
Prci11g2435 846 SUPERFAMILY Hairpin loop containing domain-like 351 417 - -
Prci11g2435 846 ProSiteProfiles Bulb-type lectin domain profile. 28 147 IPR001480 -
Prci11g2435 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Prci11g2435 846 SMART blect_4 34 150 IPR001480 -
Prci11g2435 846 SMART ntp_6 348 420 IPR003609 -
Prci11g2435 846 ProSiteProfiles PAN/Apple domain profile. 338 421 IPR003609 -
Prci11g2435 846 Pfam Protein tyrosine and serine/threonine kinase 504 703 IPR001245 GO:0004672|GO:0006468
Prci11g2435 846 SUPERFAMILY Protein kinase-like (PK-like) 487 822 IPR011009 -
Prci11g2435 846 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 147 - -
Prci11g2435 846 CDD STKc_IRAK 508 799 - -
Prci11g2435 846 Gene3D Transferase(Phosphotransferase) domain 1 578 806 - -
Prci11g2435 846 Pfam S-locus glycoprotein domain 210 317 IPR000858 GO:0048544
Prci11g2435 846 FunFam cysteine-rich receptor-like protein kinase 10 578 806 - -
Prci11g2435 846 CDD PAN_AP_plant 351 421 - -
Prci11g2435 846 CDD B_lectin 37 150 IPR001480 -
Prci11g2435 846 Gene3D - 25 148 IPR036426 -
Prci11g2435 846 ProSitePatterns Protein kinases ATP-binding region signature. 508 530 IPR017441 GO:0005524
Prci11g2435 846 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 467 577 - -
Prci11g2435 846 Pfam PAN-like domain 348 406 IPR003609 -
Prci11g2435 846 SMART serkin_6 502 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2435 846 ProSiteProfiles Protein kinase domain profile. 502 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2435 846 Gene3D Phosphorylase Kinase; domain 1 463 577 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2435 Prci-Chr11 27818379 27821786 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2435 436 840 Receptor kinase-like Gene Family AT4G05200 46.305 2.90e-116 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2435 PK_Tyr_Ser-Thr 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2435 - - pcin:129286414 1288.09