Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2434 ATGAAGCGCGTACTTTCATTTTTTTCAAAGGCGTGTCGTTCTGAACGTTACAAAGTCACACTACAGCACAACTTAGGCATGGATTCAGAACATTCATTTCCATCGCAACCTAAGAAAGGTCACTTCATCAGAGACCATGAAACAGTGAGCTCCAATAGCAGTGACTTCAAGCTTGGATTCTTCAGCCCTCAAAATTCGACAAACCGCTACGTAGGAATCTGGTATCTTTCTGAATCTAACATCATCTGGGTAGCTAATAGAAACCAGCCAGTGGTTGATGCTTTTGGGACTGTCACAATCTCCAAGGACGGGAATCTTGTGGTATTGGACAAACAGAATATTAGTGTCTGGTCCTCAAATGTTTCAAACATTGCAACTAATTCAATTGCAAAACTTTTGAACACTGGGAATCTAGTCCTCTCTGATAACAGCACAGGAGAAACTATTTGGGAGAGTTTCCAAGATCCTTCTAATCTTCTAGTTCCAAAAATGAAGCTCAGCATTAACAAAAGAACTGGAGAGAAGGTGAAACTTACGTCATGGAAAAGCCTTTCTGATCCATCTATTGGAAACTATTCTGCTTCTATTGAACGCCCAGATGCTCCCGATGTCTTTCTCTGGTTTAATGGAACTCGCCCGTATGCTCGAACCGGTCCATGGAATGGTAAGATTTTTATAGGGTCACCCACAATGTCAACTGGGTATCTTTATGGATGGAGTGTTGGGGAGGAAGATGGTGGAACTATTTATGTAACATTTAATTCTGCAAATGATACTACCTTTGCAGTTCTTGGCTTGAATCCACAAGGCCAACTTTGGACGGTATGGTGGAACAACAAAAAGGAAGTTTTGAGGAAGGTGATTAATGGCACTTACTGTGATCTATATGGCATATGTGGGGCATTTGGAAGCTGTAATTCACAAAGTTCACCGATTTGTAGCTGTTTGAATGGGTATGTACCAAAGAATTTAGAGGAATGGAATACGCAAAATTGGACTAGTGGATGCGTGAGGAAGAAGCCATTTCAATGTGAGGGGATTGCAAATAGAAGTGAAATGGAAGAAAAAGATGGGTTTGTGAGACTTGAGAACATGAAAGTGCCAGACTTTTTGGAGAGGTCAACTGCAACAGAAGATAATTGTAGAACACAGTGTCTGGATAATTGCTGTGTGGCATATGCATATGATTCAAATGGCATTGGTTGCATGCATTGGAGTGGAGATTTGATTGACATACAAAGATTCTCAAGTGGAGGGGTTGATCTTTACATTCGTGTGCCTTTGTCTGAACTTGAAAAACATTCACAAAAAAGAACAATCATCATTGCAGTTGCAGTGACAATAGGAATTATTACTTTAACAGCATGTGCATATCTCTTATGGAAATTATTGACCGTTAATAAATATGCAGGTGGGATAGATTCACACAATCAGTCTCAGAGAATGATTAGACAAGATGAAGTCAATATGGATGAGCTTCCACTTTTTGATTTTGAAGAGCTTCTAAATGCTACGAACAACTTTCACTCATCAAACATGCTTGGACGTGGTGGTTTCGGTTCAGTATACAAGGGGCAATTGAAAGATGGACAACAAATTGCAATCAAAAGACTTTCAAAAGCATCACGACAAGGGCAAGAAGAGTTCATGAATGAGGTTGTTGTGATTTCAAAGCTTCAACATCGCAATCTAGTGAGGCTTTTAGGCTGTTGCATTCAGCAAACTGAAAGGATATTAATCTATGAGTACATGCATAACAAGAGTTTGGATGCAATTCTATTTGATTCAATCAAAAAGAAAGAATTAGATTGGCAAAAACGCTTCACAATTATTGAAGGAATATCTAGAGGTTTGCTTTATCTCCATCGAGATTCTAGAATAAAAATCATACATAGAGATTTAAAGGCTAGTAACATCTTGTTGGATGAAGAGTTAAATCCAAAAATATCAGATTTTGGTATAGCTAGAATATTTAGAAGCAATGAAGAGCAAGCTAATACTAGAAGGGTGGCTGGGACATATGGCTATATATCTCCAGAATATGCAATGCAAGGGCAATTTTCAGAGAAATCAGATGTTTTTAGTTTTGGAGTTCTCATGCTAGAGATTGTTAGTGGAAGAAGCAACTCTAGATTGAATAACGTGGAGGGATCTCAAACCCTATTAGGATATGTAAGTATCTTTTGTACTTATTATTGTTGTAGATATAAGCTATCTAGTTTCATGCATGGATTTTTTTTATATTTTCAGGTGTGGAAGCTATGGAAGGAAGATAACCTTGTGTCCTTTATAGATTTAGAAATGCAGCATCAAGGTTCTTGTGAGGATATTTTACGATGTGTACACATAGGACTGCTTTGTGTGCAAGAATTAGTGAAAGAGAGGCCAACTATGGCCAATGTAGTGTCTATGCTTAGTAGTGAAATTGCCAATCTTCCTCTTCCAAGGCAACCTGCATATATACTAAACGAGACAGGGTTCAATTTTGAGCCTGCTTCAGAAGCACAGAGTTCACACTCTGCTAACTTTGTTAGCATTACTAGCATAACTGGAAGATAG 2559 0.3845 MKRVLSFFSKACRSERYKVTLQHNLGMDSEHSFPSQPKKGHFIRDHETVSSNSSDFKLGFFSPQNSTNRYVGIWYLSESNIIWVANRNQPVVDAFGTVTISKDGNLVVLDKQNISVWSSNVSNIATNSIAKLLNTGNLVLSDNSTGETIWESFQDPSNLLVPKMKLSINKRTGEKVKLTSWKSLSDPSIGNYSASIERPDAPDVFLWFNGTRPYARTGPWNGKIFIGSPTMSTGYLYGWSVGEEDGGTIYVTFNSANDTTFAVLGLNPQGQLWTVWWNNKKEVLRKVINGTYCDLYGICGAFGSCNSQSSPICSCLNGYVPKNLEEWNTQNWTSGCVRKKPFQCEGIANRSEMEEKDGFVRLENMKVPDFLERSTATEDNCRTQCLDNCCVAYAYDSNGIGCMHWSGDLIDIQRFSSGGVDLYIRVPLSELEKHSQKRTIIIAVAVTIGIITLTACAYLLWKLLTVNKYAGGIDSHNQSQRMIRQDEVNMDELPLFDFEELLNATNNFHSSNMLGRGGFGSVYKGQLKDGQQIAIKRLSKASRQGQEEFMNEVVVISKLQHRNLVRLLGCCIQQTERILIYEYMHNKSLDAILFDSIKKKELDWQKRFTIIEGISRGLLYLHRDSRIKIIHRDLKASNILLDEELNPKISDFGIARIFRSNEEQANTRRVAGTYGYISPEYAMQGQFSEKSDVFSFGVLMLEIVSGRSNSRLNNVEGSQTLLGYVSIFCTYYCCRYKLSSFMHGFFLYFQVWKLWKEDNLVSFIDLEMQHQGSCEDILRCVHIGLLCVQELVKERPTMANVVSMLSSEIANLPLPRQPAYILNETGFNFEPASEAQSSHSANFVSITSITGR 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2434 852 ProSiteProfiles PAN/Apple domain profile. 344 427 IPR003609 -
Prci11g2434 852 Gene3D - 34 154 IPR036426 -
Prci11g2434 852 FunFam cysteine-rich receptor-like protein kinase 10 584 812 - -
Prci11g2434 852 Pfam PAN-like domain 354 412 IPR003609 -
Prci11g2434 852 Pfam S-locus glycoprotein domain 216 323 IPR000858 GO:0048544
Prci11g2434 852 ProSitePatterns Protein kinases ATP-binding region signature. 514 536 IPR017441 GO:0005524
Prci11g2434 852 PIRSF SRK 19 852 IPR024171 GO:0004674
Prci11g2434 852 ProSiteProfiles Protein kinase domain profile. 508 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2434 852 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Prci11g2434 852 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 40 796 - -
Prci11g2434 852 ProSiteProfiles Bulb-type lectin domain profile. 34 153 IPR001480 -
Prci11g2434 852 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 473 583 - -
Prci11g2434 852 SUPERFAMILY Protein kinase-like (PK-like) 493 828 IPR011009 -
Prci11g2434 852 Pfam D-mannose binding lectin 81 182 IPR001480 -
Prci11g2434 852 SMART serkin_6 508 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2434 852 CDD B_lectin 43 156 IPR001480 -
Prci11g2434 852 SMART blect_4 40 156 IPR001480 -
Prci11g2434 852 Pfam Protein tyrosine and serine/threonine kinase 510 709 IPR001245 GO:0004672|GO:0006468
Prci11g2434 852 SUPERFAMILY Hairpin loop containing domain-like 357 423 - -
Prci11g2434 852 CDD STKc_IRAK 514 805 - -
Prci11g2434 852 Gene3D Phosphorylase Kinase; domain 1 469 583 - -
Prci11g2434 852 CDD PAN_AP_plant 357 427 - -
Prci11g2434 852 SMART ntp_6 354 426 IPR003609 -
Prci11g2434 852 Gene3D Transferase(Phosphotransferase) domain 1 584 812 - -
Prci11g2434 852 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 187 IPR036426 -
Prci11g2434 852 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 35 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2434 Prci-Chr11 27818379 27821786 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2434 442 846 Receptor kinase-like Gene Family AT4G05200 46.305 5.52e-116 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2434 PK_Tyr_Ser-Thr 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2434 - - pcin:129286414 1258.82