Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2433 ATGAAGCGCGTACTTTCATTTTTTTCAAAGGCGTGTCGTTCTGAACGTTACAAAGTCACACTACAGCACAACTTAGGCATGGATTCAGAACATTCATTTCCATCGCAACCTAAGAAAGGTCACTTCATCAGAGACCATGAAACAGTGAGCTCCAATAGCAGTGACTTCAAGCTTGGATTCTTCAGCCCTCAAAATTCGACAAACCGCTACGTAGGAATCTGGTATCTTTCTGAATCTAACATCATCTGGGTAGCTAATAGAAACCAGCCAGTGGTTGATGCTTTTGGGACTGTCACAATCTCCAAGGACGGGAATCTTGTGGTATTGGACAAACAGAATATTAGTGTCTGGTCCTCAAATGTTTCAAACATTGCAACTAATTCAATTGCAAAACTTTTGAACACTGGGAATCTAGTCCTCTCTGATAACAGCACAGGAGAAACTATTTGGGAGAGTTTCCAAGATCCTTCTAATCTTCTAGTTCCAAAAATGAAGCTCAGCATTAACAAAAGAACTGGAGAGAAGGTGAAACTTACGTCATGGAAAAGCCTTTCTGATCCATCTATTGGAAACTATTCTGCTTCTATTGAACGCCCAGATGCTCCCGATGTCTTTCTCTGGTTTAATGGAACTCGCCCGTATGCTCGAACCGGTCCATGGAATGTTCTTGGCTTGAATCCACAAGGCCAACTTTGGACGGTATGGTGGAACAACAAAAAGGAAGTTTTGAGGAAGGTGATTAATGGCACTTACTGTGATCTATATGGCATATGTGGGGCATTTGGAAGCTGTAATTCACAAAGTTCACCGATTTGTAGCTGTTTGAATGGGTATGTACCAAAGAATTTAGAGGAATGGAATACGCAAAATTGGACTAGTGGATGCGTGAGGAAGAAGCCATTTCAATGTGAGGGGATTGCAAATAGAAGTGAAATGGAAGAAAAAGATGGGTTTGTGAGACTTGAGAACATGAAAGTGCCAGACTTTTTGGAGAGGTCAACTGCAACAGAAGATAATTGTAGAACACAGTGTCTGGATAATTGCTGTGTGGCATATGCATATGATTCAAATGGCATTGGTTGCATGCATTGGAGTGGAGATTTGATTGACATACAAAGATTCTCAAGTGGAGGGGTTGATCTTTACATTCGTGTGCCTTTGTCTGAACTTGAAAAACATTCACAAAAAAGAACAATCATCATTGCAGTTGCAGTGACAATAGGAATTATTACTTTAACAGCATGTGCATATCTCTTATGGAAATTATTGACCGTTAATAAATATGCAGGTGGGATAGATTCACACAATCAGTCTCAGAGAATGATTAGACAAGATGAAGTCAATATGGATGAGCTTCCACTTTTTGATTTTGAAGAGCTTCTAAATGCTACGAACAACTTTCACTCATCAAACATGCTTGGACGTGGTGGTTTCGGTTCAGTATACAAGGGGCAATTGAAAGATGGACAACAAATTGCAATCAAAAGACTTTCAAAAGCATCACGACAAGGGCAAGAAGAGTTCATGAATGAGGTTGTTGTGATTTCAAAGCTTCAACATCGCAATCTAGTGAGGCTTTTAGGCTGTTGCATTCAGCAAACTGAAAGGATATTAATCTATGAGTACATGCATAACAAGAGTTTGGATGCAATTCTATTTGATTCAATCAAAAAGAAAGAATTAGATTGGCAAAAACGCTTCACAATTATTGAAGGAATATCTAGAGGTTTGCTTTATCTCCATCGAGATTCTAGAATAAAAATCATACATAGAGATTTAAAGGCTAGTAACATCTTGTTGGATGAAGAGTTAAATCCAAAAATATCAGATTTTGGTATAGCTAGAATATTTAGAAGCAATGAAGAGCAAGCTAATACTAGAAGGGTGGCTGGGACATATGGCTATATATCTCCAGAATATGCAATGCAAGGGCAATTTTCAGAGAAATCAGATGTTTTTAGTTTTGGAGTTCTCATGCTAGAGATTGTTAGTGGAAGAAGCAACTCTAGATTGAATAACGTGGAGGGATCTCAAACCCTATTAGGATATGTAAGTATCTTTTGTACTTATTATTGTTGTAGATATAAGCTATCTAGTTTCATGCATGGATTTTTTTTATATTTTCAGGTGTGGAAGCTATGGAAGGAAGATAACCTTGTGTCCTTTATAGATTTAGAAATGCAGCATCAAGGTTCTTGTGAGGATATTTTACGATGTGTACACATAGGACTGCTTTGTGTGCAAGAATTAGTGAAAGAGAGGCCAACTATGGCCAATGTAGTGTCTATGCTTAGTAGTGAAATTGCCAATCTTCCTCTTCCAAGGCAACCTGCATATATACTAAACGAGACAGGGTTCAATTTTGAGCCTGCTTCAGAAGCACAGAGTTCACACTCTGCTAACTTTGTTAGCATTACTAGCATAACTGGAAGATAG 2436 0.3846 MKRVLSFFSKACRSERYKVTLQHNLGMDSEHSFPSQPKKGHFIRDHETVSSNSSDFKLGFFSPQNSTNRYVGIWYLSESNIIWVANRNQPVVDAFGTVTISKDGNLVVLDKQNISVWSSNVSNIATNSIAKLLNTGNLVLSDNSTGETIWESFQDPSNLLVPKMKLSINKRTGEKVKLTSWKSLSDPSIGNYSASIERPDAPDVFLWFNGTRPYARTGPWNVLGLNPQGQLWTVWWNNKKEVLRKVINGTYCDLYGICGAFGSCNSQSSPICSCLNGYVPKNLEEWNTQNWTSGCVRKKPFQCEGIANRSEMEEKDGFVRLENMKVPDFLERSTATEDNCRTQCLDNCCVAYAYDSNGIGCMHWSGDLIDIQRFSSGGVDLYIRVPLSELEKHSQKRTIIIAVAVTIGIITLTACAYLLWKLLTVNKYAGGIDSHNQSQRMIRQDEVNMDELPLFDFEELLNATNNFHSSNMLGRGGFGSVYKGQLKDGQQIAIKRLSKASRQGQEEFMNEVVVISKLQHRNLVRLLGCCIQQTERILIYEYMHNKSLDAILFDSIKKKELDWQKRFTIIEGISRGLLYLHRDSRIKIIHRDLKASNILLDEELNPKISDFGIARIFRSNEEQANTRRVAGTYGYISPEYAMQGQFSEKSDVFSFGVLMLEIVSGRSNSRLNNVEGSQTLLGYVSIFCTYYCCRYKLSSFMHGFFLYFQVWKLWKEDNLVSFIDLEMQHQGSCEDILRCVHIGLLCVQELVKERPTMANVVSMLSSEIANLPLPRQPAYILNETGFNFEPASEAQSSHSANFVSITSITGR 811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2433 811 FunFam cysteine-rich receptor-like protein kinase 10 543 771 - -
Prci11g2433 811 Pfam Protein tyrosine and serine/threonine kinase 469 668 IPR001245 GO:0004672|GO:0006468
Prci11g2433 811 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 187 IPR036426 -
Prci11g2433 811 Gene3D - 34 154 IPR036426 -
Prci11g2433 811 SUPERFAMILY Protein kinase-like (PK-like) 452 787 IPR011009 -
Prci11g2433 811 Pfam PAN-like domain 313 371 IPR003609 -
Prci11g2433 811 PIRSF SRK 222 811 IPR024171 GO:0004674
Prci11g2433 811 PIRSF SRK 19 228 IPR024171 GO:0004674
Prci11g2433 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 35 153 - -
Prci11g2433 811 Pfam D-mannose binding lectin 81 182 IPR001480 -
Prci11g2433 811 Gene3D Phosphorylase Kinase; domain 1 428 542 - -
Prci11g2433 811 ProSiteProfiles Bulb-type lectin domain profile. 34 153 IPR001480 -
Prci11g2433 811 CDD STKc_IRAK 473 764 - -
Prci11g2433 811 ProSiteProfiles Protein kinase domain profile. 467 744 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2433 811 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 40 755 - -
Prci11g2433 811 CDD B_lectin 43 156 IPR001480 -
Prci11g2433 811 SMART blect_4 40 156 IPR001480 -
Prci11g2433 811 SMART ntp_6 313 385 IPR003609 -
Prci11g2433 811 ProSiteProfiles PAN/Apple domain profile. 303 386 IPR003609 -
Prci11g2433 811 Gene3D Transferase(Phosphotransferase) domain 1 543 771 - -
Prci11g2433 811 CDD PAN_AP_plant 316 386 - -
Prci11g2433 811 SUPERFAMILY Hairpin loop containing domain-like 316 382 - -
Prci11g2433 811 SMART serkin_6 467 705 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2433 811 ProSitePatterns Serine/Threonine protein kinases active-site signature. 588 600 IPR008271 GO:0004672|GO:0006468
Prci11g2433 811 Pfam S-locus glycoprotein domain 222 282 IPR000858 GO:0048544
Prci11g2433 811 ProSitePatterns Protein kinases ATP-binding region signature. 473 495 IPR017441 GO:0005524
Prci11g2433 811 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 432 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2433 Prci-Chr11 27818379 27821786 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2433 401 805 Receptor kinase-like Gene Family AT4G05200 46.305 1.15e-116 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2433 PK_Tyr_Ser-Thr 9.3e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2433 - - pcin:129286414 1189.1