Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2432 ATGGGATTCTTTTGCAGAGATACGATCCTATTCCCTATCTTGATCATATTTGGTTGCTCTTGTTTTTACTTTTGCAGCGCTAAAGACACAATCACTTCATCAAAATACATCAAGGATCCTGAAACTATTAGTTCCAGCGGGAGTTTGTTCATATTGGGATTTTTCACCCCTGAAAATTCTACAAACCGCTATGTGGGAATCTGGTACAAGACCCAATCCAATATTGTATGGGTAGCTAACAGAAACCAGCCATTGAAAGATTCATCTGGGACTGTTAAAATATTTGAGGATGGCAATCTTGTGGTATTAAATGGGCAAAACCAAATCATTTGGTCATCAAATGTGTCAAATACTGCAGTCAACACAACTTGTCAGCTTTTAGATTCTGGAAATCTTGTCCTTCTAGACAACTCTGCAGAAAACATCTTCTGGCAAAGTTTCGAGCATCCTACTGATTCATTCCTCCCACATATGAAACTTACAAGTAACAAAAGAACAGGTGAGAAACTAAGAATCACATCATGGACAAGTTTGTCAGATCCATCAATTGGTAAGTTCTTCATCACACTTGAACGCCTAGATATTCCTGAAATATTCATCTGGAATGGAACTCGCCCATATTGGCGTAGTGGTCCATGGAATGGTAGAACCTTTACTGGTATATACTATATGAATTCCTTTTATCTTAAAGGTTTTCGTATAATAGATGATGGGGAAGGAACTATTTATTCGTCTTTTAGTTTTCCTGATGTGACAAAATTCATCCTCTTTGTCTTAGATTTTCAAGGCGTATTATATGAAAAAGATTGGTTTAATGATACAATTCAACCACAACAGAATTATAGTATTCAAACTTCAGAATGTGATATTTATGGTTTATGTGGATCATTTGGAAGCTGCAACCCAAATAGTTCACCTATATGCAACTGTTTGAGAGGGTTTGAACCGAGCAGTAGAATGGAATGGGATATGAAAAACTGGACTAATGGTTGTGTTAGGAAGACAACTTTGCAGTGTGAGAAGGTGAAGGATGGACGTGCACAAGGCAAAGAAGATGGATTTTTGAAGTTACAGATGGTTAAAGTGCCAGATTTTGCAGAAAGGTCTTCTTCTTCAGAGGAGACATGCAGAAGCCAGTGCTTGGAGAACTGTACTTGTGTAGCTTACTCATACAGTCCTGAAATAGGTTGCATGTCTTGGAAAGGAAATCTAATTGACATACAGCAGTTCCCAATAGGAGGACTTGATCTATATGTTCGTCTAGCCTATTCAGACCTAGAAAAGGGGAGACACGTGAGAACAATCATTATCATTATAGCAATAATAGGAACAATTATCATTGCTTTTGGTGCATATGTTTTATGGAAAAGGATAGTGAAACACTCAGAGAGAAAATCAAAGAATAGATGGTTCTCACGATTAAGGAAAGGTGAAGAATATTCAGAGAAAGCACAAGACATCAATATAGTAGAATTGTCACGTGCCAAACTACCAGACCTATTGACATATGATTTTGAGAAGGTTGCAATGGCTACAAACAATTTCGACCAGTCTAATAAACTTGGGCAGGGTGGCTTTGGTCCAGTGTACAAGGGTATATTTCAAGATGGTCAGAATATAGCAGTTAAAAGACTTTCTAGAGCCTCTGGACAAGGACTGGAAGAATTTATGAATGAGGTCATTGTCATTTCTAAGCTTCAACATCGTAATCTTGTAAAACTCCTCGGTTGCTGCATTGAAGGAGGAGAGAAGATGTTAATCTATGAGTACATGCCAAATAAAAGTTTGGATACATTTCTTTTTGATCCATCAAAACAAAAACTCCTAGATTGGAGAAAGCGTTTTATCATAATTGAAGGAATAGCTCGAGGAGCACTTTATCTTCATCGAGATTCTAGGCTAAAAATTATACACAGAGACCTAAAGGCAGGCAACATATTGTTGGATGAGAACATGAATCCAAAAATATCAGATTTTGGCATGGCTAGAATTTTTGGAGGGAGTGAAGATCAAGCTAATACAAGAAGAGTTGTTGGAACCTAG 2043 0.3744 MGFFCRDTILFPILIIFGCSCFYFCSAKDTITSSKYIKDPETISSSGSLFILGFFTPENSTNRYVGIWYKTQSNIVWVANRNQPLKDSSGTVKIFEDGNLVVLNGQNQIIWSSNVSNTAVNTTCQLLDSGNLVLLDNSAENIFWQSFEHPTDSFLPHMKLTSNKRTGEKLRITSWTSLSDPSIGKFFITLERLDIPEIFIWNGTRPYWRSGPWNGRTFTGIYYMNSFYLKGFRIIDDGEGTIYSSFSFPDVTKFILFVLDFQGVLYEKDWFNDTIQPQQNYSIQTSECDIYGLCGSFGSCNPNSSPICNCLRGFEPSSRMEWDMKNWTNGCVRKTTLQCEKVKDGRAQGKEDGFLKLQMVKVPDFAERSSSSEETCRSQCLENCTCVAYSYSPEIGCMSWKGNLIDIQQFPIGGLDLYVRLAYSDLEKGRHVRTIIIIIAIIGTIIIAFGAYVLWKRIVKHSERKSKNRWFSRLRKGEEYSEKAQDINIVELSRAKLPDLLTYDFEKVAMATNNFDQSNKLGQGGFGPVYKGIFQDGQNIAVKRLSRASGQGLEEFMNEVIVISKLQHRNLVKLLGCCIEGGEKMLIYEYMPNKSLDTFLFDPSKQKLLDWRKRFIIIEGIARGALYLHRDSRLKIIHRDLKAGNILLDENMNPKISDFGMARIFGGSEDQANTRRVVGT 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2432 680 Gene3D - 22 147 IPR036426 -
Prci11g2432 680 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Prci11g2432 680 CDD PAN_AP_plant 335 422 - -
Prci11g2432 680 ProSiteProfiles PAN/Apple domain profile. 339 422 IPR003609 -
Prci11g2432 680 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 480 590 - -
Prci11g2432 680 ProSiteProfiles Bulb-type lectin domain profile. 28 147 IPR001480 -
Prci11g2432 680 SMART blect_4 34 150 IPR001480 -
Prci11g2432 680 Pfam Protein tyrosine and serine/threonine kinase 518 665 IPR001245 GO:0004672|GO:0006468
Prci11g2432 680 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 670 - -
Prci11g2432 680 ProSiteProfiles Protein kinase domain profile. 515 680 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2432 680 SMART serkin_6 515 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2432 680 Gene3D Phosphorylase Kinase; domain 1 475 590 - -
Prci11g2432 680 CDD B_lectin 34 150 IPR001480 -
Prci11g2432 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Prci11g2432 680 Gene3D Transferase(Phosphotransferase) domain 1 591 680 - -
Prci11g2432 680 SMART ntp_6 349 421 IPR003609 -
Prci11g2432 680 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 147 - -
Prci11g2432 680 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 215 IPR036426 -
Prci11g2432 680 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 591 680 - -
Prci11g2432 680 Pfam PAN-like domain 349 407 IPR003609 -
Prci11g2432 680 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Prci11g2432 680 SUPERFAMILY Protein kinase-like (PK-like) 500 680 IPR011009 -
Prci11g2432 680 Pfam D-mannose binding lectin 75 175 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2432 Prci-Chr11 27812032 27815235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2432 424 680 Receptor kinase-like Gene Family AT4G05200 51.163 3.55e-79 264
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2432 PK_Tyr_Ser-Thr 1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2432 - - pcin:129286414 1116.29