Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2431 ATGGGATTCTTTTGCAGAGATACGATCCTATTCCCTATCTTGATCATATTTGGTTGCTCTTGTTTTTACTTTTGCAGCGCTAAAGACACAATCACTTCATCAAAATACATCAAGGATCCTGAAACTATTAGTTCCAGCGGGAGTTTGTTCATATTGGGATTTTTCACCCCTGAAAATTCTACAAACCGCTATGTGGGAATCTGGTACAAGACCCAATCCAATATTGTATGGGTAGCTAACAGAAACCAGCCATTGAAAGATTCATCTGGGACTGTTAAAATATTTGAGGATGGCAATCTTGTGGTATTAAATGGGCAAAACCAAATCATTTGGTCATCAAATGTGTCAAATACTGCAGTCAACACAACTTGTCAGCTTTTAGATTCTGGAAATCTTGTCCTTCTAGACAACTCTGCAGAAAACATCTTCTGGCAAAGTTTCGAGCATCCTACTGATTCATTCCTCCCACATATGAAACTTACAAGTAACAAAAGAACAGGTGAGAAACTAAGAATCACATCATGGACAAGTTTGTCAGATCCATCAATTGGTAAGTTCTTCATCACACTTGAACGCCTAGATATTCCTGAAATATTCATCTGGAATGGAACTCGCCCATATTGGCGTAGTGGTCCATGGAATGGTAGAACCTTTACTGGTATATACTATATGAATTCCTTTTATCTTAAAGGTTTTCGTATAATAGATGATGGGGAAGGAACTATTTATTCGTCTTTTAGTTTTCCTGATGTGACAAAATTCATCCTCTTTGTCTTAGATTTTCAAGGCGTATTATATGAAAAAGATTGGTTTAATGATACAATTCAACCACAACAGAATTATAGTATTCAAACTTCAGAATGTGATATTTATGGTTTATGTGGATCATTTGGAAGCTGCAACCCAAATAGTTCACCTATATGCAACTGTTTGAGAGGGTTTGAACCGAGCAGTAGAATGGAATGGGATATGAAAAACTGGACTAATGGTTGTGTTAGGAAGACAACTTTGCAGTGTGAGAAGGTGAAGGATGGACGTGCACAAGGCAAAGAAGATGGATTTTTGAAGTTACAGATGGTTAAAGTGCCAGATTTTGCAGAAAGGTCTTCTTCTTCAGAGGAGACATGCAGAAGCCAGTGCTTGGAGAACTGTACTTGTGTAGCTTACTCATACAGTCCTGAAATAGGTTGCATGTCTTGGAAAGGAAATCTAATTGACATACAGCAGTTCCCAATAGGAGGACTTGATCTATATGTTCGTCTAGCCTATTCAGACCTAGAAAAGGGGAGACACGTGAGAACAATCATTATCATTATAGCAATAATAGGAACAATTATCATTGCTTTTGGTGCATATGTTTTATGGAAAAGGATAGTGAAACACTCAGAGAGAAAATCAAAGAATAGATGGTTCTCACGATTAAGGAAAGGTGAAGAATATTCAGAGAAAGCACAAGACATCAATATAGTAGAATTGTCACGTGCCAAACTACCAGACCTATTGACATATGATTTTGAGAAGGTTGCAATGGCTACAAACAATTTCGACCAGTCTAATAAACTTGGGCAGGGTGGCTTTGGTCCAGTGTACAAGGGTATATTTCAAGATGGTCAGAATATAGCAGTTAAAAGACTTTCTAGAGCCTCTGGACAAGGACTGGAAGAATTTATGAATGAGGTCATTGTCATTTCTAAGCTTCAACATCGTAATCTTGTAAAACTCCTCGGTTGCTGCATTGAAGGAGGAGAGAAGATGTTAATCTATGAGTACATGCCAAATAAAAGTTTGGATACATTTCTTTTTGATCCATCAAAACAAAAACTCCTAGATTGGAGAAAGCGTTTTATCATAATTGAAGGAATAGCTCGAGGAGCACTTTATCTTCATCGAGATTCTAGGCTAAAAATTATACACAGAGACCTAAAGGCAGGCAACATATTGTTGGATGAGAACATGAATCCAAAAATATCAGATTTTGGCATGGCTAGAATTTTTGGAGGGAGTGAAGATCAAGCTAATACAAGAAGAGTTGTTGGAACCTACGGGTACATGTCTCCTGAGTATGCAATGGAAGGATTATTTTCAGAGAAGTCAGATGTATTTAGTTTCGGAGTTTTATTATTAGAGATTGTAAGTGGAAGAAGAAACTCAAGTCCTCATAACAATGAGGACACTCTCAGCCTTTTAGGATTTGCCTGGAAATTATGGAATGAAGAGAATATAACAATGTTAATAGATCCTAAAATATATGATACAAACCTGGAGAAGGATATATTGAGGTGCATACACATAGGGCTTTTGTGTGTGCAAGAGCTTGCAAGAGAAAGGCCAAGCATGAGCACTGTGGTTTCTATGCTTAACAGTGAGATTGTAAATCTTTCTCCTCCAAAGCAACCTGCATTCATCCAGTGGCAGAGTTTGTTGTGTTCTACATCCAATGAAGGAAGTCAAGGATTGTTTTCAAACAATACTGTTAGCATTACAGAAATATGTGGAAGATAA 2502 0.3741 MGFFCRDTILFPILIIFGCSCFYFCSAKDTITSSKYIKDPETISSSGSLFILGFFTPENSTNRYVGIWYKTQSNIVWVANRNQPLKDSSGTVKIFEDGNLVVLNGQNQIIWSSNVSNTAVNTTCQLLDSGNLVLLDNSAENIFWQSFEHPTDSFLPHMKLTSNKRTGEKLRITSWTSLSDPSIGKFFITLERLDIPEIFIWNGTRPYWRSGPWNGRTFTGIYYMNSFYLKGFRIIDDGEGTIYSSFSFPDVTKFILFVLDFQGVLYEKDWFNDTIQPQQNYSIQTSECDIYGLCGSFGSCNPNSSPICNCLRGFEPSSRMEWDMKNWTNGCVRKTTLQCEKVKDGRAQGKEDGFLKLQMVKVPDFAERSSSSEETCRSQCLENCTCVAYSYSPEIGCMSWKGNLIDIQQFPIGGLDLYVRLAYSDLEKGRHVRTIIIIIAIIGTIIIAFGAYVLWKRIVKHSERKSKNRWFSRLRKGEEYSEKAQDINIVELSRAKLPDLLTYDFEKVAMATNNFDQSNKLGQGGFGPVYKGIFQDGQNIAVKRLSRASGQGLEEFMNEVIVISKLQHRNLVKLLGCCIEGGEKMLIYEYMPNKSLDTFLFDPSKQKLLDWRKRFIIIEGIARGALYLHRDSRLKIIHRDLKAGNILLDENMNPKISDFGMARIFGGSEDQANTRRVVGTYGYMSPEYAMEGLFSEKSDVFSFGVLLLEIVSGRRNSSPHNNEDTLSLLGFAWKLWNEENITMLIDPKIYDTNLEKDILRCIHIGLLCVQELARERPSMSTVVSMLNSEIVNLSPPKQPAFIQWQSLLCSTSNEGSQGLFSNNTVSITEICGR 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2431 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 147 - -
Prci11g2431 833 Pfam PAN-like domain 349 407 IPR003609 -
Prci11g2431 833 SMART serkin_6 515 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2431 833 ProSiteProfiles Bulb-type lectin domain profile. 28 147 IPR001480 -
Prci11g2431 833 SMART blect_4 34 150 IPR001480 -
Prci11g2431 833 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 777 - -
Prci11g2431 833 PIRSF SRK 3 833 IPR024171 GO:0004674
Prci11g2431 833 CDD B_lectin 34 150 IPR001480 -
Prci11g2431 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 636 648 IPR008271 GO:0004672|GO:0006468
Prci11g2431 833 SMART ntp_6 349 421 IPR003609 -
Prci11g2431 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 480 590 - -
Prci11g2431 833 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 215 IPR036426 -
Prci11g2431 833 Gene3D - 22 147 IPR036426 -
Prci11g2431 833 ProSiteProfiles Protein kinase domain profile. 515 801 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2431 833 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Prci11g2431 833 CDD PAN_AP_plant 335 422 - -
Prci11g2431 833 Gene3D Transferase(Phosphotransferase) domain 1 591 794 - -
Prci11g2431 833 ProSiteProfiles PAN/Apple domain profile. 339 422 IPR003609 -
Prci11g2431 833 Pfam D-mannose binding lectin 75 175 IPR001480 -
Prci11g2431 833 Pfam Protein tyrosine and serine/threonine kinase 518 785 IPR001245 GO:0004672|GO:0006468
Prci11g2431 833 SUPERFAMILY Protein kinase-like (PK-like) 501 817 IPR011009 -
Prci11g2431 833 CDD STKc_IRAK 521 787 - -
Prci11g2431 833 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Prci11g2431 833 Gene3D Phosphorylase Kinase; domain 1 475 590 - -
Prci11g2431 833 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 591 794 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2431 Prci-Chr11 27811656 27815230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2431 429 801 Receptor kinase-like Gene Family AT4G23230 50.663 5.26e-125 387
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2431 PK_Tyr_Ser-Thr 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2431 - - pcin:129286414 1376.69