Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2430 ATGGGATTCACAATGAAAATTCACAATTTGATAAAGATTTTGCTTTTACTTTTCAATTTCCATTTGGGTATGAGATCTGCAATGGACACTATCACCTCAGGTCAATTCATCAGAGACCATGAAACAGTGAGCTCCAATAGCAGTGACTTCAAGCTTGGCTTCTTCAGCCCTCAAAATTCCACAAACCGCTATGTAGGAATCTGGTATCTTTCTGAATCTGACATCATCTGGGTAGCCAACAAAAATCAACCATTATTTGATACTTTTGGGTTTATCACAATCTCTAAGGATGGGAATCTTGTGGTTTTGGGCAAACAGAACGTGAGTATTTGGTCTACAAATGTCTCAAATATTGCAACTAATTCAACTGCAAAACTTCTGAACACTGGGAATCTAGTCCTCTCTGATAATAACACAGGAGAAACTATTTGGGAGAGTTTCCAAGATCCTTCAAATGTATTTTTACCCAAGATGAAGCTCAGTATCAACAAAATAACAGGAGAGAAGGTGAAATTTACATCATGGAGAAGTCTTTCTGATCCATCTACAGGATACTACTCTGTTTCCCTTGAACGCCCAGATGCTCCTGACATTTTTGCCTGGTTTAATGGAACTCAGCCGTATGCTCGAACTGGTCCATGGAATGGAAGGATATTTATAGGGAGGCCTATGAAGCTATCTTCTGGGTATCTTTATGGATGGTACGTAAGAAATGATCCTGATGGAACACTTTATGTGACTTTTGAATTTGCAAATGATTCCGATTTTGCGATGCTTGGCCTGAATCCACAAGGCCAACTTTGGGTAGCAATGTGGAACAACAAGAGGGAAGTCTTGAGGGAGGTGGTGAATTACACTTACTGTGATTTCTACGGCAAATGTGGGGCTTTTGGAAGCTGTGATTTACGAAGTTCACCAATCTGTAACTGTTTGAATGGGTATGAACCAAAGAAGTTAGATGAATGGAACAGGCAAAATTGGACGAGTGGGTGTGTGAGGAAGGAGCCATTGCAATGCGAGGGATTTACAAATAGAACTGACAGAGACCAAAGGGATGGGTTTGTGAAACTTGAGAACATGAAAGCGCCAGACTTTTTGGTGAGGTCAATAACTGTTACAGAAGATGATTGCAGAACACAGTGCTTGAATAATTGCTCTTGTGTGGCATATGCATTTGATTTGAATGGCATTGGATGCATGCATTGGAGTGGGGACTTGATTGACCTAGAAAGATTCTCAAGTGGAGGGGTTGATCTTTACATTCGTGTGCCTTCATCAGAACTTGAAACACATTCGCACAAAAGAAGAATCATCATTGTAATTACAGTGACAATAGGAATTATTGCTTTAACTGCATGTGCATATCTCCTATGGAAACTGACCCCTAAACATGCAGAAAGTGTAGGTGGGACTGGTTCACATAGTCAGTCTCAAAGAATGATTAGTCAACACAAAGAAATCAAAATGGACGATGAACTTCTACATTTTGATTTTGAAGAGCTTGCAACTGCTACAAACAACTTCCATTCAACAAACATGCTTGGACGGGGAGGTTTTGGTTCAGTGTACAAGGGACAACTGAAAGATGGACAGCTAATTGCAATCAAAAGACTTTCAAAAGCATCAAGACAAGGGCAAGAAGAATTCATGAATGAGGTTATAGTGATTTCAAAGCTTCAACACCGCAATCTAGTAAGACTTTTAGGTTGTTGCATTCAGCAAGATGAAAGAATGTTAATCTATGAGTACATGCAAAACAAGAGTTTGGATACAATTCTATTTGATCCAATTAAAAAGAAACAGTTGGATTGGCAAAAGCGTTTTAAAATTATTGAAGGAATCTCTCGAGGTTTGCTTTATCTCCATAGAGATTCTAGAATAAAAATCATACATAGAGATTTAAAGGTTAGTAACATCTTGTTGGATGAAGAATTAAATCCAAAAATATCAGACTTTGGAATGGCTAGGATATTTAGAAGCAATGAAGATCAAGCTAGTACTAGAAAAGTGGTTGGTACATTTGGCTATATATCTCCTGAATACGCAATGCAAGGACAATTTTCTGAAAAATCAGACGTATTTAGTTTTGGAGTTTTATTGCTCGAGATTGTTAGTGGAAGAAGCAACTCTAGATTGCATAACATGGAGGGATCTCAAACTCTTTTAGGATATGTATGGAAGCTTTGGAATGAAGATAACCTTGTGCCCTTTATAGATTCCGAAATATTCTATCAAGGTTCTTGTGATGAAATGTTGCGGTGTATACATATAGGACTTCTTTGTGTGCAAGAACTAGTGAAAGAGCGGCCAACTATGGACAATGTAGTGTCTATGCTTAACAGTGAGATTGTCAATCTTCCAGCTGCAAGGCAACCTTCATATGTACTAAATGAGATGGGATTTACTTCAAAGTCCACTTCAGAAACAGAGACTTCGCACTCTGCTAACTTTGTCAGCATCACTGAAATACAAGTCTCAGTCATCCTTCTTCAACGTGCATCTCAAGGACTCTTCATCTCAGAAATGGGATTCTTTGGCAGACATACAATCCTATTCTCTGTCATGGTCATACTTGTTTGCTCTTCTTTTGAAATCTGCAGTTCCAAAGACACCATCAAGTTATCACAGCACATTAAGGATCCTGAAACTGTTAGTTCCAATGGGAGTTTCTTTACGTTGGGATTTTTCAGTCCTGAAAACTCTACAAATCGCCATGTAGGAATTTGGTACAAGTCCCAGTCCAATATCATATGGGTAGCCAATAGAAACCAACCATTGAAGGATTCTTCTGGGACTATTGCAATATCTGAGGATGGCAATCTTGTCATATTAAATGGGCAAAACCACATCATTTGGTCATCAAATGTGTCAAATATTACAGTCACTACAACGTGTCGGCTTCAAGGTTCTGGAAATCTTGTCCTACAAGATTCTGCAGAAAACATCTTATGGCAAAGTTTTGAACATCCTTCTGATTCATTCCTCCCCCAAATGAAACTTACAAGCAACAAAAGAACAGGTGAGAAACTAAGAGTCACATCATGGAAAAGTTTGTCAGATCCATCCAATGGAAACTTCTTTGCCACACTTGAACATCCAGATATACCTGAAATATTCATCTGGAATGGATCTCGCCCATATTGGCGCAGCGGTCCATGGAATGATAGGATCTTTACTGGTATATACTATATGAATGCCTATTATCTTCAAGGGTTTCGTATCATCAATGACGATGTGGAAGGAACTGTTTATTTGGATTTTAGTTATTCTAATGTGACAGACTACACATTCTTTGTCTTGAACTTTCGAGGTGTATTATATCAAAAAGATTGGCTTAGTGACACAATACAACCACATCAGAACTTTAGTATTCAAACTTCAGAATGTGATATTTATGGTTTATGTGGAGCATTTGGAAGTTGCAACTCAAATAGTTCACCTATATGCAACTGTTTGAGAGGGTTTGAACCAAGCAACAGAATGGAATGGGATATGCAAAACTGGACTAATGGTTGCGTTAGGAAGACAACTTTGCAGTGTGAGAAGTTGAAAAATCAAAGTGCACAAGGCAAACAAGATGGATTTTTGAAGTTGCAGATGGTTAAAGTGCCAGACTTTGGAGAAAGGTCTTCTGCTCCAGAGGAGACCTGCAGAAGCCAGTGCTTGGAGAATTGTACTTGTGCAGCTTACTCATTCAGCCCTGAGATAGGTTGCATGTCTTGGAAAGGAAACCTAATTGATGTACAACAGTTCTCAACAGGAGGACTTGATCTATATGTTCGTCTAGCCTATTCAGATCTTGAAAAGGGGAGAGATGCGAGAAAGATCATTATGGTTTCAGTAATAATAGGAACACTTATCATTGCTTTTGGTGCATATGTTTTATGGAAAATAGTGAAACACTCAGAGAGAAAATGGAAGAACAAATGGTTCTTCCGATTAAAGAAAGGTAAAGAATATTCAGAGAAAACACAAGACAGCATTATTGAAGAATTGTCACATGTTAGACAACCAGAGGTATTGGCATATGGTCTTGAAAAGGTTGCAACTGCTACAAACAATTTTGACCTCTCTAATAAGCTTGGGCAGGGTGGCTTTGGTCCCGTGTACAAGGGAATATTGCAAGATGGTCAGACTGTAGCAGTTAAAAGACTTTCTAGAGCATCTGGACAGGGACTAGAGGAATTTATGAATGAAGTCATTGTCATTTCCAAGCTTCAACACCGTAATCTTGTAAAACTTATTGGCTGCTGTGTCGAAGGAGGAGAGAAGATGTTAATCTACGAGTATATGCCAAATAAAAGTTTAGATGCATTTATTTTTGATCCACTGAACCATGAAATCCTAGATTGGAGAGAGCGCTTTGACATAATTGAAGGGGTAGCTCGAGGAGTACTTTATCTTCATCGAGATTCTAGACTAAAAATTATACATAGAGACCTAAAGGCAAGCAACATATTGCTGGATGAGAACTTGAATCCAAAAATATCAGATTTTGGTATGGCAAGAATTTTCCAAGGGAGTGAAGATCAAGCTAACACGAGAAGAGTTGTTGGAACCTACGGTTATATGTCTCCTGAATATGCAATAGAAGGATTGTTTTCAGAGAAATCCGATGTGTTTAGTTTTGGAGTTTTACTACTAGAGATTGTAAGCGGAAGAAGAAACTCAAGCCCTTCTAACAATGAGGGTTCTCTCAGCCTTCTAGGACTTACATGGAAATTTTGGAATGAAGAGAATACTGCGTTACTAATAGATCCTAGAATATATGATACCAACCTGGAGAAGGATATTTTGAGATGCATACACATAGGGCTCTTATGTGTGCAAGACCTTGCAAGAGAAAGGCCAAGTATGAGCATTGTGGTTTCTATGCTTAACAGTGAGATTATAAATCTTCCTCCTCCAAATCAACCTGCATTCATCCAGTGGCAGAGTTTGACGTGTTCAGCATCCAGTGAAGAAAGTCAAACATTGTTTTCAAACAATAGTGTTAGCATTACAGAGATAGATGGCAGATAG 5022 0.3859 MGFTMKIHNLIKILLLLFNFHLGMRSAMDTITSGQFIRDHETVSSNSSDFKLGFFSPQNSTNRYVGIWYLSESDIIWVANKNQPLFDTFGFITISKDGNLVVLGKQNVSIWSTNVSNIATNSTAKLLNTGNLVLSDNNTGETIWESFQDPSNVFLPKMKLSINKITGEKVKFTSWRSLSDPSTGYYSVSLERPDAPDIFAWFNGTQPYARTGPWNGRIFIGRPMKLSSGYLYGWYVRNDPDGTLYVTFEFANDSDFAMLGLNPQGQLWVAMWNNKREVLREVVNYTYCDFYGKCGAFGSCDLRSSPICNCLNGYEPKKLDEWNRQNWTSGCVRKEPLQCEGFTNRTDRDQRDGFVKLENMKAPDFLVRSITVTEDDCRTQCLNNCSCVAYAFDLNGIGCMHWSGDLIDLERFSSGGVDLYIRVPSSELETHSHKRRIIIVITVTIGIIALTACAYLLWKLTPKHAESVGGTGSHSQSQRMISQHKEIKMDDELLHFDFEELATATNNFHSTNMLGRGGFGSVYKGQLKDGQLIAIKRLSKASRQGQEEFMNEVIVISKLQHRNLVRLLGCCIQQDERMLIYEYMQNKSLDTILFDPIKKKQLDWQKRFKIIEGISRGLLYLHRDSRIKIIHRDLKVSNILLDEELNPKISDFGMARIFRSNEDQASTRKVVGTFGYISPEYAMQGQFSEKSDVFSFGVLLLEIVSGRSNSRLHNMEGSQTLLGYVWKLWNEDNLVPFIDSEIFYQGSCDEMLRCIHIGLLCVQELVKERPTMDNVVSMLNSEIVNLPAARQPSYVLNEMGFTSKSTSETETSHSANFVSITEIQVSVILLQRASQGLFISEMGFFGRHTILFSVMVILVCSSFEICSSKDTIKLSQHIKDPETVSSNGSFFTLGFFSPENSTNRHVGIWYKSQSNIIWVANRNQPLKDSSGTIAISEDGNLVILNGQNHIIWSSNVSNITVTTTCRLQGSGNLVLQDSAENILWQSFEHPSDSFLPQMKLTSNKRTGEKLRVTSWKSLSDPSNGNFFATLEHPDIPEIFIWNGSRPYWRSGPWNDRIFTGIYYMNAYYLQGFRIINDDVEGTVYLDFSYSNVTDYTFFVLNFRGVLYQKDWLSDTIQPHQNFSIQTSECDIYGLCGAFGSCNSNSSPICNCLRGFEPSNRMEWDMQNWTNGCVRKTTLQCEKLKNQSAQGKQDGFLKLQMVKVPDFGERSSAPEETCRSQCLENCTCAAYSFSPEIGCMSWKGNLIDVQQFSTGGLDLYVRLAYSDLEKGRDARKIIMVSVIIGTLIIAFGAYVLWKIVKHSERKWKNKWFFRLKKGKEYSEKTQDSIIEELSHVRQPEVLAYGLEKVATATNNFDLSNKLGQGGFGPVYKGILQDGQTVAVKRLSRASGQGLEEFMNEVIVISKLQHRNLVKLIGCCVEGGEKMLIYEYMPNKSLDAFIFDPLNHEILDWRERFDIIEGVARGVLYLHRDSRLKIIHRDLKASNILLDENLNPKISDFGMARIFQGSEDQANTRRVVGTYGYMSPEYAIEGLFSEKSDVFSFGVLLLEIVSGRRNSSPSNNEGSLSLLGLTWKFWNEENTALLIDPRIYDTNLEKDILRCIHIGLLCVQDLARERPSMSIVVSMLNSEIINLPPPNQPAFIQWQSLTCSASSEESQTLFSNNSVSITEIDGR 1673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2430 1673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1476 1488 IPR008271 GO:0004672|GO:0006468
Prci11g2430 1673 ProSiteProfiles Zinc finger SWIM-type profile. 370 410 IPR007527 GO:0008270
Prci11g2430 1673 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 865 987 - -
Prci11g2430 1673 SUPERFAMILY Protein kinase-like (PK-like) 491 815 IPR011009 -
Prci11g2430 1673 SUPERFAMILY Protein kinase-like (PK-like) 1339 1626 IPR011009 -
Prci11g2430 1673 ProSiteProfiles Bulb-type lectin domain profile. 28 147 IPR001480 -
Prci11g2430 1673 CDD PAN_AP_plant 1176 1263 - -
Prci11g2430 1673 Pfam S-locus glycoprotein domain 1048 1158 IPR000858 GO:0048544
Prci11g2430 1673 Pfam S-locus glycoprotein domain 210 317 IPR000858 GO:0048544
Prci11g2430 1673 SMART ntp_6 349 423 IPR003609 -
Prci11g2430 1673 SMART ntp_6 1190 1262 IPR003609 -
Prci11g2430 1673 Pfam PAN-like domain 1190 1248 IPR003609 -
Prci11g2430 1673 Pfam PAN-like domain 349 409 IPR003609 -
Prci11g2430 1673 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1431 1634 - -
Prci11g2430 1673 CDD B_lectin 875 990 IPR001480 -
Prci11g2430 1673 ProSiteProfiles Bulb-type lectin domain profile. 869 988 IPR001480 -
Prci11g2430 1673 ProSitePatterns Protein kinases ATP-binding region signature. 514 536 IPR017441 GO:0005524
Prci11g2430 1673 SUPERFAMILY Hairpin loop containing domain-like 348 419 - -
Prci11g2430 1673 Pfam Protein tyrosine and serine/threonine kinase 1357 1556 IPR001245 GO:0004672|GO:0006468
Prci11g2430 1673 Pfam Protein tyrosine and serine/threonine kinase 511 778 IPR001245 GO:0004672|GO:0006468
Prci11g2430 1673 CDD B_lectin 35 150 IPR001480 -
Prci11g2430 1673 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 15 770 - -
Prci11g2430 1673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
Prci11g2430 1673 CDD STKc_IRAK 1361 1627 - -
Prci11g2430 1673 Gene3D Transferase(Phosphotransferase) domain 1 584 789 - -
Prci11g2430 1673 Gene3D Transferase(Phosphotransferase) domain 1 1431 1632 - -
Prci11g2430 1673 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 147 - -
Prci11g2430 1673 ProSiteProfiles Protein kinase domain profile. 508 802 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2430 1673 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 584 787 - -
Prci11g2430 1673 Gene3D Phosphorylase Kinase; domain 1 469 583 - -
Prci11g2430 1673 Gene3D Phosphorylase Kinase; domain 1 1315 1430 - -
Prci11g2430 1673 ProSiteProfiles PAN/Apple domain profile. 339 424 IPR003609 -
Prci11g2430 1673 CDD PAN_AP_plant 336 424 - -
Prci11g2430 1673 Pfam D-mannose binding lectin 75 176 IPR001480 -
Prci11g2430 1673 Pfam D-mannose binding lectin 916 1016 IPR001480 -
Prci11g2430 1673 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 181 IPR036426 -
Prci11g2430 1673 SMART blect_4 34 150 IPR001480 -
Prci11g2430 1673 SMART blect_4 875 990 IPR001480 -
Prci11g2430 1673 CDD STKc_IRAK 514 780 - -
Prci11g2430 1673 ProSiteProfiles Protein kinase domain profile. 1355 1631 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2430 1673 Gene3D - 24 147 IPR036426 -
Prci11g2430 1673 Gene3D - 864 987 IPR036426 -
Prci11g2430 1673 ProSiteProfiles PAN/Apple domain profile. 1180 1263 IPR003609 -
Prci11g2430 1673 SMART serkin_6 1355 1619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2430 1673 SMART serkin_6 508 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2430 1673 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1319 1430 - -
Prci11g2430 1673 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 474 583 - -
Prci11g2430 1673 SUPERFAMILY alpha-D-mannose-specific plant lectins 906 1021 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2430 Prci-Chr11 27800258 27809628 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2430 421 799 Receptor kinase-like Gene Family AT4G05200 47.781 3.25e-114 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2430 PK_Tyr_Ser-Thr 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2430 - - pcin:129286414 3342.36