Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2420 ATGGGATTCAGTAAAAAAGCTTGTTTGCTGTGTGCTTTCCTTATATGTTTGTTCTCTACGACACATGTGGTCTGTGCCTTGGACTCCATTTCATCATCTGTGTCAATCCAAGAACCTGAAACAGTGAGGTCATGTAACAACATGTTCACACTAGGATTCTTCAGTCCTCAAAATTCCACTAATCGCTACCTGGGAATTTGGTACATGTCCGAGTCCTCTATTGTTTGGGTTGCTAACAGAAACAATCCACTAATCGATTCTTCTGGGATTCTCACAATCTCAGAAAATGGCAATCTTGTTGTTTTGAATGGGCAAAAGCAGGTTGTTTGGTCAACAAATGTCTCGCTAGTTGCCTCAAACTCCAGTGCTCAACTCTCGGGTCTTGGCAACCTTGTCCTTGCTGATGGCAATACACTGTTACCCTTCATGAAAATCAGTATTAATAAAAGAACAGTATTTGTATGGAAAGAAAATCGTCCTTATTTTCGAACTGGCCCCTGGGATGGCGCAGACTTCCTTGGGGTACCAAGGATAGATTCAACTAACCACAAGGATGGGTTTCAAATGAAAGAAGAGGAAGGGACTTTGGAACTATATTTTTCATACGAGTCATTTCTGACTTTTCCCTTAAATCCTCTAGGTAAAATAGAACAAAGGCGTTGGAATTCCCAGACAAATAGATTGGAACTTATGAGGATAATTGGTTCTTCAGAGTGTGATGTTTATGGCAAATGTGGTCCATTCGGGATTTGTAATTTGCAGAGCTCCCCAATTTGCAGCTGCTTGAGAGAGTTTGAACCAAGGAACGAAGAAGAATGGGGAAGGCAGAACTGGACCAGAGGGTGCGTCAGAAGAGAAGCACTTCAATGTGAAAGAGACAAAAATGATTCTCGAGCTAGCAAAATAGATGGGTTTTGGATGCTGGAGAGAGTGAAATTACCAGATGATGCACAAGTGTTACCTTCTTTCTCTGAGGCTATTGTAGACTGTCAAACTGCATGCCTCAAGAATTGCTCTTGTGTTGCTTATGCCCATGAAAGAAACCTTGGCTGTACGATTTGGTATGCAGATTTACTTGACTTACGGAGCTTCCCAGAAGAAGAGATTGATGTTTACATACGTTTAGCCTACTCAGAACTAGGCATAGGAAAAAGGAACATGACAACGCCTATTACAATATCATCTTTGATAGGAACAATTCTCATTACGGAGCAAACTCAAGACGAAACAAGGATGATGCCCCTGAAGCAAGTCCATATTCCAGATCTATCATTGTTTTCTTTGAAAAAGTTGGAAACTGCAACAAATAACTTTGACATATCAAATAAACTTGGGCAGGGTGGTTTTGGTCCAGTTTACAAGGGGACATTGGAAGATGGGCAGGAAATAGCAGTAAAAAGACTATCAAGGTTATCAGGACAAGGTATTGAAGAATTTATAAATGAAGTGGAGTTGATCTCTACACTTCAACATCAAAACCTTGTTAGACTTCTTGGAAGTTGCATTGAAGAAGAGATATTGGTTTATGAATACATGCCAAACAAAAGTTTGGATACATACATATTTGATCCATTGAAACAAAAATCCTTAAATTGGAAGCGCTTCACCATTATCGAGGGAATAGCAAGAGGATTGCTTTATCTTCATAGAGATTCAAGATTACGAATCATACACAAAGATTTAAAGGCAAGTAACATATTATTGGATGAGAAAATGAATCCAAAGATATCAAATTTTGAAATGGCTAAACTTTTTGGAGGCAGTGAAAATCAAGCAAATACAGAAAGGGTTGTTGGAACATATGGCTATATTTCTCCAGAATATGCAACAGAAGGACTCTATTCGAAGAAATCTGATGTCTTTAGCTTTGGTGTTTTGCTATTGGAAATTATTAGTGGAAGGAAAAACACTAGCTTTTATGAAGATGCAGAATCTTTCACACTTTTAGGATTTGCATGGAAATTATGGATCGATGACAATGTTATGCCTCTAATAGATCCACAAATATATGATCCAAGCTTTTACAAGGGCATATTGCAGTGCATCCATATTGGGCTTTTGTGTGTGCAAGAACTTGCAAAAGATAGGCCCATAATGGCCTCTGTAATGTCCATGCTTCATAGTGAGATTATGGATATTCCTCTCCCAAACCAACCTGCATTCATTCTCAGGCAGACCATGTCTCTTATAGAAGAGCAAACTACAAAATATGGATCATGTTCCATCAATAAATGGATGATCACAACCCACGTTTGCAGCGCTGGCAACATGACTCTCACGCACACCAGCTACGCGCATGAGAACAGCAAAACAGAGCAACAATGGAGAAGACAAACAGAGACAGAGAAGAAAGATGAAGAACCTGGGTATCGCACAGCGAGAGCGACCTCACAGCAACTCGTCTCTCTCGTCGACGGTAGCAAAGGATGA 2430 0.3984 MGFSKKACLLCAFLICLFSTTHVVCALDSISSSVSIQEPETVRSCNNMFTLGFFSPQNSTNRYLGIWYMSESSIVWVANRNNPLIDSSGILTISENGNLVVLNGQKQVVWSTNVSLVASNSSAQLSGLGNLVLADGNTLLPFMKISINKRTVFVWKENRPYFRTGPWDGADFLGVPRIDSTNHKDGFQMKEEEGTLELYFSYESFLTFPLNPLGKIEQRRWNSQTNRLELMRIIGSSECDVYGKCGPFGICNLQSSPICSCLREFEPRNEEEWGRQNWTRGCVRREALQCERDKNDSRASKIDGFWMLERVKLPDDAQVLPSFSEAIVDCQTACLKNCSCVAYAHERNLGCTIWYADLLDLRSFPEEEIDVYIRLAYSELGIGKRNMTTPITISSLIGTILITEQTQDETRMMPLKQVHIPDLSLFSLKKLETATNNFDISNKLGQGGFGPVYKGTLEDGQEIAVKRLSRLSGQGIEEFINEVELISTLQHQNLVRLLGSCIEEEILVYEYMPNKSLDTYIFDPLKQKSLNWXKRFTIIEGIARGLLYLHRDSRLRIIHKDLKASNILLDEKMNPKISNFEMAKLFGGSENQANTERVVGTYGYISPEYATEGLYSKKSDVFSFGVLLLEIISGRKNTSFYEDAESFTLLGFAWKLWIDDNVMPLIDPQIYDPSFYKGILQCIHIGLLCVQELAKDRPIMASVMSMLHSEIMDIPLPNQPAFILRQTMSLIEEQTTKYGSCSINKWMITTHVCSAGNMTLTHTSYAHENSKTEQQWRRQTETEKKDEEPGYRTARATSQQLVSLVDGSKG 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2420 810 ProSiteProfiles PAN/Apple domain profile. 290 376 IPR003609 -
Prci11g2420 810 SMART blect_4 33 141 IPR001480 -
Prci11g2420 810 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 136 742 - -
Prci11g2420 810 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 169 IPR036426 -
Prci11g2420 810 Pfam PAN-like domain 300 361 IPR003609 -
Prci11g2420 810 PIRSF SRK 2 148 IPR024171 GO:0004674
Prci11g2420 810 PIRSF SRK 141 762 IPR024171 GO:0004674
Prci11g2420 810 MobiDBLite consensus disorder prediction 793 810 - -
Prci11g2420 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 557 569 IPR008271 GO:0004672|GO:0006468
Prci11g2420 810 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Prci11g2420 810 MobiDBLite consensus disorder prediction 771 792 - -
Prci11g2420 810 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 512 715 - -
Prci11g2420 810 SUPERFAMILY Protein kinase-like (PK-like) 419 707 IPR011009 -
Prci11g2420 810 Gene3D - 21 158 IPR036426 -
Prci11g2420 810 SMART ntp_6 300 375 IPR003609 -
Prci11g2420 810 MobiDBLite consensus disorder prediction 764 810 - -
Prci11g2420 810 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 141 - -
Prci11g2420 810 Pfam D-mannose binding lectin 74 136 IPR001480 -
Prci11g2420 810 CDD B_lectin 40 139 IPR001480 -
Prci11g2420 810 Gene3D Phosphorylase Kinase; domain 1 399 511 - -
Prci11g2420 810 SMART serkin_6 438 699 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2420 810 Gene3D Transferase(Phosphotransferase) domain 1 512 714 - -
Prci11g2420 810 Pfam S-locus glycoprotein domain 162 268 IPR000858 GO:0048544
Prci11g2420 810 ProSiteProfiles Protein kinase domain profile. 438 711 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2420 810 FunFam Os08g0179000 protein 408 511 - -
Prci11g2420 810 Pfam Protein tyrosine and serine/threonine kinase 440 643 IPR001245 GO:0004672|GO:0006468
Prci11g2420 810 CDD PAN_AP_plant 288 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2420 Prci-Chr11 27429446 27444157 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2420 429 722 Receptor kinase-like Gene Family AT4G23230 57.095 2.72e-115 362
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2420 PK_Tyr_Ser-Thr 2.8e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2420 - - pcin:129286407 1616.67