Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2418 ATGTTCGTCATGGGATTCAGTAAAAAAGCTCGCTTGCTGCGTCCTTTCCTTATATGTTTGTTCTCTACGACACGTATGGTCTGTGCCTTGGACTCCATTTCATCATCTGTGTCAATCCAAGAACCTGAAACAGTAAGCTCAAGTAATAACATGTTCACACTAGGATTCTTCAGTCCTCAAAATTCTACAAATCGCTACCTGGGAATTTGGTGCATGTCCGAGTCTTCTATTGTTTGGGTTGCTAACAGAAACAACCCACTAACAGATTCTTCTGGGATTCTCACAATATCAGAAAATGGCAATCTTGTTGTTTTGAATGGTCAAAGACAGGTTCTTTGGTCAACAAACGTCTCACAAGTTGCCTCAAACTCTAGTGCTCAACTCTTGGATTCTCGCAACCTTGTCCTTACTGATGGAATTACAGGAGTATCCGTATGGCAGAGTTTCCAACATCCTGGCAATACACTATTACCATACATGAAAGCCAGTACTAATAAAAGAACAGGTAAGCAAGTGAAACTTACATCATGGAAAAGTGCATCTGATCCATCTTATGGAGAATTTTCTTGCAGTCTTGAAGTCCGTAATGTAACTGAAGTATTTGTGTGGAAAGAAAATCATCCTTATTTTCGAACTGGTCCCTGGGATGGCGCAGAGTTTCTTGGGGTACCAAGGACAGATTCAATTAACAATAAGGATGGGTTTCAAGTGACAGAAGACGATGTGACTGTGGAACTATATTTTTCATACAAGTATTTTGTGACTTTTACCCTAAATCCTCAAGGTAAAATAGAACAACGGCTTTCGAATTCCCAGACAAATAGATTGGAACTTATGAGGATGATTGGTTCTTCAGAGTGTGATGCTTATGGCAAATGTGGTCCATTCGGGATTTGTAATTTGCAGACCTCCCCAATTTGCAGCTGCTTGAGAGGGTTTGAACCAAGGAACAAAGAAGAATGGGAAAGGCAAAAATGGACCAATGGGTGTGTTAGAAGAGAAGCACTTCAGTGTGAAAGAGACACAAATGATTCTCAAGTTAGCAAAATAGATGGGTTTTGGAGGCTGGAGAGAGTGAAATTACCAGATGATGCACAAGTGTCACCTTCTTTCTCTGAGGCTATCGTAGACTGTCAAACTGCATGCCTCAAGAATTGCTCTTGTATCGCTTATGCTCATGAAAGAAACCTTGGCTGTATGATTTGGTATGCAGATTTACTCGACTTACAGAGCTTACCAGGCGAAGAGATTGATGTTTACATACGTTTAGCCTACTCAGAACTAGGCATAGGCAAGAGGAAGATGACATGGCCAATTATGATATCGGTTTTTATAGGGCCAATTCTCATTACAGTGTCTGGATATTTCCTATGGAAAAAATGCTCAAACCAAAAAGGTGAAATGCAGGTACAGACTCCAGACATAACAAGGATGATGCCCCTGAAGCAAGTCCATATCCCAGATCTATCATTGTTTTCTTTGAGAAAGTTGGAAACTGCAACAAATAACTTTGACATATCAAATAAACTTGGACAGGGTGGTTTTGGTCCAGTTTACAAGGGGGCATTGGAAGATGGGCAGGAAATAGCTGTAAAAAGACTATCAAGATTATCCGGACAGGGTATGGAAGAATTTATAAATGAAGTGGAGTTGATCTCTAAGCTTCAACACCGAAACCTTGTTAGACTTCTTGGATGTTGCATTGAAGAAGAGATATTGGTTTATGAATACATGCCAAACAGAAGTTTGGATACATATATCTTTGATCCATTAAAACAAAAATCCTTAGATTGGGAAAAGCGCTTCACTATAATCGAGGGAATAGCTAGAGGATTGCTCTATCTTCACAGAGATTCAAGATTACGAATTATACATAGAGATTTAAAGGCAAGTAACATATTATTGGATGAGAAAATGAATCCAAAGATATCAGATTTTGGAATGGCTAAACTTTTTAGAAGTAGTGAAAATCAAGCAAATACAGAAAGAATTGTTGGAACATATGGCTATATTTCTCCAGAATATGCAACAGAAGGGCTCTATTCAGAGAAATCTGATGTATTTAGCTTTGGTGTTTTGCTGCTGGAGATTATTAGTGGAAGAAAAAACACCAGCTTTTATGAAGATGCAGAATGTTTCACACTTTTAGGATTTGCATGGAAATTATGGATAGATGACAATGTTATGCCTCTAATAGATCCACAAATATATGATCCAAGCTTTTACAAGGACATATTGCAGTGCATGCATATTGGGCTTTTGTGCGTGCAAGAACTTGCAAAAGATAGGCCCACAATGGCCTGTGTAATGTCAATGCTTCATAGTGAGATTATGGATATTCCTCTCCCAAACCAACCTGCATTCATTCTCAGGCAGACCATGTCTCTTGCAGAAGAGCAAACTACAAAAAATGGATCATGTTCCATCAATAAAGTAACCATCTCTAATATCGAGGGGAGATAG 2463 0.3894 MFVMGFSKKARLLRPFLICLFSTTRMVCALDSISSSVSIQEPETVSSSNNMFTLGFFSPQNSTNRYLGIWCMSESSIVWVANRNNPLTDSSGILTISENGNLVVLNGQRQVLWSTNVSQVASNSSAQLLDSRNLVLTDGITGVSVWQSFQHPGNTLLPYMKASTNKRTGKQVKLTSWKSASDPSYGEFSCSLEVRNVTEVFVWKENHPYFRTGPWDGAEFLGVPRTDSINNKDGFQVTEDDVTVELYFSYKYFVTFTLNPQGKIEQRLSNSQTNRLELMRMIGSSECDAYGKCGPFGICNLQTSPICSCLRGFEPRNKEEWERQKWTNGCVRREALQCERDTNDSQVSKIDGFWRLERVKLPDDAQVSPSFSEAIVDCQTACLKNCSCIAYAHERNLGCMIWYADLLDLQSLPGEEIDVYIRLAYSELGIGKRKMTWPIMISVFIGPILITVSGYFLWKKCSNQKGEMQVQTPDITRMMPLKQVHIPDLSLFSLRKLETATNNFDISNKLGQGGFGPVYKGALEDGQEIAVKRLSRLSGQGMEEFINEVELISKLQHRNLVRLLGCCIEEEILVYEYMPNRSLDTYIFDPLKQKSLDWEKRFTIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEKMNPKISDFGMAKLFRSSENQANTERIVGTYGYISPEYATEGLYSEKSDVFSFGVLLLEIISGRKNTSFYEDAECFTLLGFAWKLWIDDNVMPLIDPQIYDPSFYKDILQCMHIGLLCVQELAKDRPTMACVMSMLHSEIMDIPLPNQPAFILRQTMSLAEEQTTKNGSCSINKVTISNIEGR 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2418 820 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 19 764 - -
Prci11g2418 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 470 577 - -
Prci11g2418 820 ProSiteProfiles Protein kinase domain profile. 504 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2418 820 SMART ntp_6 348 423 IPR003609 -
Prci11g2418 820 SMART blect_4 36 152 IPR001480 -
Prci11g2418 820 Gene3D Phosphorylase Kinase; domain 1 465 577 - -
Prci11g2418 820 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Prci11g2418 820 CDD STKc_IRAK 510 773 - -
Prci11g2418 820 CDD EGF_CA 286 317 - -
Prci11g2418 820 CDD B_lectin 43 152 IPR001480 -
Prci11g2418 820 Pfam Domain of unknown function (DUF3403) 775 820 IPR021820 GO:0004674
Prci11g2418 820 Pfam S-locus glycoprotein domain 210 316 IPR000858 GO:0048544
Prci11g2418 820 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 183 IPR036426 -
Prci11g2418 820 CDD PAN_AP_plant 336 424 - -
Prci11g2418 820 Pfam PAN-like domain 349 409 IPR003609 -
Prci11g2418 820 SMART serkin_6 504 766 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2418 820 Gene3D Transferase(Phosphotransferase) domain 1 578 780 - -
Prci11g2418 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 578 781 - -
Prci11g2418 820 ProSiteProfiles Bulb-type lectin domain profile. 30 149 IPR001480 -
Prci11g2418 820 Pfam Protein tyrosine and serine/threonine kinase 506 770 IPR001245 GO:0004672|GO:0006468
Prci11g2418 820 Gene3D - 26 150 IPR036426 -
Prci11g2418 820 PIRSF SRK 3 820 IPR024171 GO:0004674
Prci11g2418 820 Pfam D-mannose binding lectin 77 178 IPR001480 -
Prci11g2418 820 SUPERFAMILY Protein kinase-like (PK-like) 485 773 IPR011009 -
Prci11g2418 820 ProSiteProfiles PAN/Apple domain profile. 338 424 IPR003609 -
Prci11g2418 820 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2418 Prci-Chr11 27414792 27418535 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2418 426 791 Receptor kinase-like Gene Family AT4G05200 49.728 1.52e-119 375
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2418 PK_Tyr_Ser-Thr 6.7e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2418 - - pcin:129286407 1284.24