Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2409 ATGTTTCTTACAGGATTTGGTTCAAGTTCTTGCTCGCTACTTCCTTTTTTTATACATTTGTTCTCTTTTTCCGCTCTGGTTTGTGCCTTGGACACTGTTACACCATCTCTAGAGATCCATGAACCCAAAACAATAAGGTCAAATAATGGCATGTTTACTCTAGGATTCTTTAGTCCTGAGAATTCCACGAATCGCTACTTAGGAATCTGGCTTATGTCTGAATCAACTATTGTTTGGGTGGCAAACAGAGACGACCCAGTAACAGATTCTTCTCGGATTCTTACAATATCAGACAATGGCAATCTTGTTGTCTTGAATGGGCAAAAACAAGTTGTCTGGTCAACAAATGTCTCACATATTGCATCAAATTCCAGTGTTCAACTCTTGGATTCCGGCAACCTTGTCCTCACTGATAGGACTGCCGGAGCAATGGTGTGGCAGAGTTTCCGACATCCCTGTGATACATTATTACAAGACTTAAAACTCAGTACTAATCAACAAACAGGCGAGAAAGTGAAACTTACATCATGGAAAAGTACATCTGATCCATCCCATGGAAGATTTTCTTTAGGTCTAGGGCATCTTAATTTTACTCAAGTTTTCATTTGGAAAGAAAATAGTCCTCATTGGCGGAGTGGTCCTTGGAATGGTACAAACTTTCTTGGGATACCTGGGACGTCATCTATGATTGGAGATGGCTTCCAAGTGAAAGAAGATGAAGGAATTTTTGAAGTTTCTTTTCATTTCACAGACAAGTCTCTGTTGATGACTTTCGCGTTAGATTCTCAAGGAAAACTGTCAGAACATATTTGGGATTTCCAGAAAAATGCATGGGAATTGCGGCGGAGAATTGGGGATTCTGAGTGCGATTTTTATGGAAAATGTGGCCCGTTTGGGATCTGCAATTCACAGAGCTCCCCAATCTGTAGCTGCTTGAGAGGATTTGAACCTAAGAACAAAGAAGAATGGGAAAAGCAGAACTGGACCAATGGATGCGTGAGAAGGGAAGCACTTCAGTGTGTGAAAAACAATAATGGCTCTCAAGCTACTAGCACAACAGATGGGTTTTTCAAGCTGGAGAGGGTAAAAGTACCAGATCAAGCAGAGTCATTACCATATAACTTCAGAGATGTTGTTGATTGTCGAACTCCATGTCTGAAGAGTTGCTCTTGTAAAGCTTATGCATTTGACCCAGGCCTTGGCTGTATGGTTTGGAATGTAGATTTACTTGACATCTTGAGCAATTCACCTGGAGGAGTGGATCTTTACTTACGTTTAGCCTCATCAGAACTTGATACGGTTGGGAGGAGTAACATGACAGCACCAATTGTAATATCAGTTCTGACAGGAACAATTGTCATTATTGCCTCTGGATTTTTCCTATGGCAAAAATGGTCAAAGCAAAAAGGTGGGGTACATAAGCAAATTGTTGACGAGAAGGAATACAAAACTGAAGCAAGCCAAATTCAAGAGTTATCCTTGTTTGATTTTAGAAAGTTGGCTACTGCAACAAACAACTTTGACTTGGCAAATAAAATCGGGCAGGGTGGTTTTGGTCCAGTATACAAGGGAAAGTTGGAAGCTGGACAAGAAATAGCAGTAAAAAGATTGTCAAGATCATCTGGACAGGGTGTGGAAGAATTTATCAGTGAAGTGGAATTGATTTCTAAACTTCAACACCGAAACCTTGTTAGACTTCTTGGCTGTTGCATGAAAGAAGAAGAGATATTAGTTTACGAATACTTGCCAAACAAGAGTTTAGATGCTTATATCTTTGCGGTAGATCCACTGCAACAAAAGTATTTAGATTGGGGGAAGCGCTTCAACATAATAGAAGGGATAGCTAGAGGATTACTTTATCTTCATAGAGATTCAAGATTAAGAATTATACACAGAAATGTAAAAGCTAGTAATATATTGTTGGATAAAGAGATGAATGCAAAAATATCAGATTTTGGGACGGCTAAACTTTTTCAAGGTGATCAAGATCGAGCTAATACAAAAAGAATTGTTGGAACATTTGGCTACATTTCTCCTGAATATGCAACTGAAGGATTCTATTCAGAGAAATCTGATGTTTTTAGCTTTGGTGTTTTGCTACTAGAAATTATTAGTGGAAGAAAAAACACAAGTTTTTATGAAGATGCAGAATGTTTGACACTTTTAGGATTTGCATGGAAATTATGGATGGATGCCAATGTTATACCTCTAATAGATCCACAAATTTATGATCCAAACTTTCAGAACGATATATTAAGGTGTATTCATATAGGTCTTTTGTGTGTGCAAGAACTTGCAAAGGACAGGCCCCCTATGGCATCTGTACTGTCAATGCTTCAAAGTGAGATTATAGATATTCCTCCACCAAGACAACCTGCATTCATCTTCAGGCAAACAATGTCTTGTGCAGCAGAGAAAGCTCTAGAAAATAATGAGTTATGTTCCATCAATATTGTAACTATGTCACATTTTGAGGGGAGATAG 2484 0.3869 MFLTGFGSSSCSLLPFFIHLFSFSALVCALDTVTPSLEIHEPKTIRSNNGMFTLGFFSPENSTNRYLGIWLMSESTIVWVANRDDPVTDSSRILTISDNGNLVVLNGQKQVVWSTNVSHIASNSSVQLLDSGNLVLTDRTAGAMVWQSFRHPCDTLLQDLKLSTNQQTGEKVKLTSWKSTSDPSHGRFSLGLGHLNFTQVFIWKENSPHWRSGPWNGTNFLGIPGTSSMIGDGFQVKEDEGIFEVSFHFTDKSLLMTFALDSQGKLSEHIWDFQKNAWELRRRIGDSECDFYGKCGPFGICNSQSSPICSCLRGFEPKNKEEWEKQNWTNGCVRREALQCVKNNNGSQATSTTDGFFKLERVKVPDQAESLPYNFRDVVDCRTPCLKSCSCKAYAFDPGLGCMVWNVDLLDILSNSPGGVDLYLRLASSELDTVGRSNMTAPIVISVLTGTIVIIASGFFLWQKWSKQKGGVHKQIVDEKEYKTEASQIQELSLFDFRKLATATNNFDLANKIGQGGFGPVYKGKLEAGQEIAVKRLSRSSGQGVEEFISEVELISKLQHRNLVRLLGCCMKEEEILVYEYLPNKSLDAYIFAVDPLQQKYLDWGKRFNIIEGIARGLLYLHRDSRLRIIHRNVKASNILLDKEMNAKISDFGTAKLFQGDQDRANTKRIVGTFGYISPEYATEGFYSEKSDVFSFGVLLLEIISGRKNTSFYEDAECLTLLGFAWKLWMDANVIPLIDPQIYDPNFQNDILRCIHIGLLCVQELAKDRPPMASVLSMLQSEIIDIPPPRQPAFIFRQTMSCAAEKALENNELCSINIVTMSHFEGR 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2409 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 582 787 - -
Prci11g2409 827 CDD STKc_IRAK 513 780 - -
Prci11g2409 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 472 581 - -
Prci11g2409 827 PIRSF SRK 6 827 IPR024171 GO:0004674
Prci11g2409 827 Pfam S-locus glycoprotein domain 210 319 IPR000858 GO:0048544
Prci11g2409 827 Gene3D Transferase(Phosphotransferase) domain 1 582 785 - -
Prci11g2409 827 Pfam D-mannose binding lectin 76 178 IPR001480 -
Prci11g2409 827 SMART blect_4 36 152 IPR001480 -
Prci11g2409 827 Pfam Protein tyrosine and serine/threonine kinase 509 775 IPR001245 GO:0004672|GO:0006468
Prci11g2409 827 CDD EGF_CA 288 319 - -
Prci11g2409 827 ProSiteProfiles Protein kinase domain profile. 507 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2409 827 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 21 770 - -
Prci11g2409 827 Pfam PAN-like domain 350 412 IPR003609 -
Prci11g2409 827 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 26 149 - -
Prci11g2409 827 CDD B_lectin 43 152 IPR001480 -
Prci11g2409 827 Gene3D Phosphorylase Kinase; domain 1 467 581 - -
Prci11g2409 827 SMART ntp_6 351 426 IPR003609 -
Prci11g2409 827 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 217 IPR036426 -
Prci11g2409 827 ProSiteProfiles PAN/Apple domain profile. 340 427 IPR003609 -
Prci11g2409 827 Gene3D - 26 149 IPR036426 -
Prci11g2409 827 ProSiteProfiles Bulb-type lectin domain profile. 30 149 IPR001480 -
Prci11g2409 827 CDD PAN_AP_plant 338 427 - -
Prci11g2409 827 SUPERFAMILY Protein kinase-like (PK-like) 486 779 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2409 Prci-Chr11 27018691 27023197 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2409 439 794 Receptor kinase-like Gene Family AT4G23230 51.541 3.68e-116 364
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2409 PK_Tyr_Ser-Thr 5.1e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2409 - - qsa:O6P43_012541 945.651