Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2408 ATGTTGCGGACAGATGATTGGCATCTCTCTGCAGATCCTCTGAAGAACAGCAAAGGATTCCTTAGACAGTGCCATAAAAGCTTTTGTATAGGTTTCATCACTGCTTTAGAATCCATTACATCATCTGTTTTCATCAGAGATTCAGAAACTGTAAGTTCAAACAACAGCGCATTCAAACTTGGATTCTTCAGCCCTCAAAATACCACAGATCATCGCTATGTAGGAATTTGGAATATCTCCAACTCCGAAGTCATATGGGTGGCTAATAGAAACCAACCATTACACGATTCTTCTGGGATCCTTACTATATCTGAGGACAACAATCTTGTAGTATTGAATGGAAAGAAAGAGGTTTTTTGGACATCAAATGTATCAAGCAAACAATCAAGTCCCACTGCTCAACTTCTTGATTCTGGTAACCTTGTGCTTTTAGACCACACTGGCAAGACTTTATGGGAGAGTTTTCAACATCCAAGAGACATGGACTTTCCAACTTTGGCAATGATCAGTACCAACCAGAAAAAAGGTTCATCAAGAAAAAGCCCTCCTACAAGAAAACTGGCTTACACGACCAGAATAAACAAAGTTGGGAAGCAGCGAAGGGTTCAAGAATCTAATTGTGATACATATAACTATTGTGGGACATATGGGATCTGTGACTCCAATAATTCCCCAATATGCACTTGCCTGAAAGGGTTTGAGCCTAAGAATATAGAAGAATGGAATAGCCAAAACTGGACTAGTGGATGTGTGAGAAGGGCATCACTGCAATGTGGGACTGGTAAAGGCAAAGATGACTGGTTTCTTGAGCTGCAAATGACAAACACTCCGTCATATTCAACTCCATCATTTTTTCCTAAGGACACATGCAGAACTCAGTGCATAAATAATTGCAGCTGTATAGCATATGCATATGTTGCTTCTCTTTCCTGCATTTACTGGACTGGAAATTTAACAGGTGTAGTAAGATTGTCCAGTGGAGGAACTAATCTCTACATCCGCCAAGCCCATTCAGAACTCGGTAGGAATAAGAAAGACTTCAAAGTAGTTATCTCAGTAACAGTGATAGTAGGAGTGATCATCATTGCCATCTGTGCATATGTCTTAAAGGCATGGACTGCTAAACACACTGCAAGAAAAAAGCAAAGCAAAGCAAAATTATTGCTGAACAAGGAAGAAAACCTACTACTTGGAGACCTGAAAATAGCTAAACTTGAGAAGCTACCACTGTTTGATCCAAGAATCATTGCAACTGCAACAAACAACTTCAGCATCGCTAATAAGCTTGGGCAGGGTGGTTTTGGTTTAGTATACAAGGGAGAATTGCAAGATGGACAAGAAATAGCAGTGAAAAGACTTTCAAGAACATCTAAACAAGGACTGGAAGAGTTCATCAATGAAGTGGTTGTGATTTCGAACCTTCAACATCGTAATCTTGTAAAACTTTTAGGCTGCTGTATCGAAGGAGAGGAGAAAATGTTGATATATGAGCACATGCCTAATAAGAGTTTGGATGCTTTCATATATGATCCTATCAGAAAGAAGATTTTAGATTGGAAAAACCGCTTGAACATAATTAAAGGAATTGCCCGTGGCTTACTTTATCTTCATAGAGATTCTGGACTAAAAATTATACATCGAGACTTAAAGCTAAGTAACATCTTACTAGATGATCAGCTTAATCCTAAGATATTAGACTTTGGTCTAGCAAGAATCTTTGAAAGCAATGAAGATGAAAGCAATACTCAAAGAGTTGTTGGAACATACGGTTACATGCCACCTGAATATGCAATGGAAGGATTATTTTCAGAAAAATCAGACGTGTTCAGCTTCGGAGTTTTACTATTTGAGATCATCAGTGGTAGGAAAAATATAAGCCTTTGTGATCATGAACATTCATTGAACCTCTTGGAACTTGCATGGAAATTATGGAACGAAGATGGTATCAAGTCTCTCATAGATGTGGAAATATGTGATCCAGTTTACATCAGGGACATTGTGAGATGCATACACATTGGATTTTTATGTGTTCAAGAACATGCAAGAGACAGGCCTTCTATGGCCACTGTAAATTCAATGCTCAATAATCACATTGCTAATCTTCCTCCGTCATGTCAGCCTGCATTCTACATACAGAGGAAGTTTGTGCCAAGTGCGAAGTTGTCTCATAAAAGTAATAAGTCATACTCCGTTAATAGCATCACTTTCACAAACATTCAAGGGAGATCTAATTTGTTTCTGCAACGAGCCGTTAGCAGCGGCGGAACCACTATTGCATGGCTACCTCTTCTTACACATGATATGAGAGTGTTCCTTGAAATCATGGGGATTAGTTCACTTAGAAACTTATTACCTGTTTTTCTTGTGATTTCTGGCTTTTGTGCAGATTTTTGCCCTGCCTCTGACACTATTACAACAACTCAGTTCGTTAGAGATTCTGAAATTGTAAGCTCAAACAACAGTGAATTTGAACTGGGATTCTTCAGCCCTGAAAATGCAACGAATCGCTATGTAGGAATCTGGTATGTTTCTGACTCGAATGTCATCTGGGTGGCTAACAGAAACCAACCATTGAAAGATTCATCTGGAATTCTCACAATATCTGAGGACAAGAATCTTGTTGTATTGAATGGAGATAAAGAGGTTGTTTGGACTTCAAATATATCAAACAAGGCATCCAATTCCACTGCTCAACTTCTCAACACGGGAAACTTAGTCCTGCTAGATGACACAGGCAGAACATTATGGGAGAGTTTCCAACATCCAGGTAATTCATTCCTTCCAAATTTGGTAATTAGTACTAACCAAAAAACAGGTGAGAAACTGAAGGTTACTTCATGGAAGAGCCCTTCGGATCCGTCCGTTGGAAGCTTCTCCAGTGGCCTTGAACGCCCCAGTACGCCTGAAGTGTTCGTCTGGAATCAAACACAGCCATATTGGAGGTCAGGTCCTTGGAATGGTCAAGTGTTCATTGGGTTATCCAAGATGTATACTTCCTCATATCTAAATGGATTTGACGTAGGAAGGGAAGAAAATGGGTCTGTTCACATAACATATTCTTTGCCAAATGAGTCTTTCTTTGGAACCATAGTTTTGAGTTCAGAAGGAAAACTAGTCTTAACCACCTGGATGAACAAACTCAAAGTTGGGATGCGAACTGTCCAAGATTCAATCTGTGATATGTATGGTTTATGCGGGACATTTGGAAGCTGTGATCCCAGAAATTCCCCAATCTGCAGCTGTTTGAGAGGATTTGAGCCAAGGAATGCCGAGGAATGGAATAGACGAAACTGGACTAGTGGATGTGTGAGAAGGGCATCGTTGCGGTGTGGGAAGGTGAAAAATGGGAGAGATACTGATAAAGATGATGGGTTTTTGAAACTGCCAATGACGAAAGTGCCAGATTTTGCAGAGAAGTCATATGGTTCTGAGGAAATGTGCAGAATTCAATGCCTAAATAATTGCAATTGTACGGCATATGCATATGATGCTGCAATTGGCTGCATGTCTTGGAATGGAAACTTAATCGACGTTGTAAGATTTTCAAGGGGAGGAGTGGACCTTTATATCCGAGAAGCCTATTCTGAACTTGAAAGAGAAAAGAAAGTGTTGAAAGTAGTCATCATAGTTACAGTGGCAGTAGGAGTAATTATCATTGTTGCTGCATATATTGTATGGTGGTGGGCTGCTAGACATTTTGCTAGAAGGAAAGGAAATAATGGAGCATTAACGCTGGAAATAGAAGAATCACATTTAAAAAACCACAGGGCAAACCTAATAGAAGACCTGAAAATAGCTAAATTAGAGGAGCTGCCACTATTCGATTTTGGAATCATTGCTACTGCAACAAACAACTTCAGTTTTGCTAATAAGCTTGGAAGAGGTGGCTTTGGTACAGTATATAAGGGAGAGTTGCGAGATGGACAGGAAATTGCAGTGAAGAGGCTCTCAAGAGCATCTGGACAAGGGCTAGAAGAATTTATGAATGAAGTGGTTGTTATTTCAAAGCTTCAACATCGTAATCTAGTAAGACTTCTAGGTTGTTGCATTGAAGGAGAGGAAAAGATGTTGATCTATGAGTACATGCCAAACAAGAGTTTGGATGCTTTTGTGTTTGATCCTATAAAAAAGAAGGCTTTAGATTGGAAAAAACGACTTAACATAATTGAAGGAATCTCTCGTGGTGTACTTTATCTCCATAGAGATTCTAGATTAAAAATTATTCATAGAGATCTAAAGCCTAGTAATATCTTGTTGGATGGAGAGCTTAATCCAAAGATATCCGACTTTGGCATGGCAAGAATCTTCCAAAACAATGAAGATGAAGGCAATACAAGAAGGGTTGTTGGAACATATGGCTACATGTCACCTGAATATGCTATGGAAGGACTATTTTCAGAGAAATCAGATGTGTTTAGTTTTGGAGTTTTGCTGCTAGAGATCATTAGTGGTACGAAAGTCACAAGTTTTTATGTCTATGAACACTCATTGAGCCTTTTAGGATTTGCATGGAAGTCATGGAATGAAGAGGACATCATATCTTTTATAGACCCTGAAATATCAGCAGCAGATTTTATCAATGAAGTTAGAAGATGTATGCACATTGGACTTCTATGTGTCCAAGAACTTGCAAGAGACAGACCTTCTATGGCCACAGTAATGTCAATGCTTAACAGTGACATTGTTAATCTTCCTCCTCCATGTCATCCTGCATTCAATAAAAGGCACGGTGTATCAAGTTCAGAATCTTCTCAACAAAGCAACAAATCATGCTCCCTCAACAGTGTAACTCTCACAAACATGCAAGGGAGATAG 4815 0.3925 MLRTDDWHLSADPLKNSKGFLRQCHKSFCIGFITALESITSSVFIRDSETVSSNNSAFKLGFFSPQNTTDHRYVGIWNISNSEVIWVANRNQPLHDSSGILTISEDNNLVVLNGKKEVFWTSNVSSKQSSPTAQLLDSGNLVLLDHTGKTLWESFQHPRDMDFPTLAMISTNQKKGSSRKSPPTRKLAYTTRINKVGKQRRVQESNCDTYNYCGTYGICDSNNSPICTCLKGFEPKNIEEWNSQNWTSGCVRRASLQCGTGKGKDDWFLELQMTNTPSYSTPSFFPKDTCRTQCINNCSCIAYAYVASLSCIYWTGNLTGVVRLSSGGTNLYIRQAHSELGRNKKDFKVVISVTVIVGVIIIAICAYVLKAWTAKHTARKKQSKAKLLLNKEENLLLGDLKIAKLEKLPLFDPRIIATATNNFSIANKLGQGGFGLVYKGELQDGQEIAVKRLSRTSKQGLEEFINEVVVISNLQHRNLVKLLGCCIEGEEKMLIYEHMPNKSLDAFIYDPIRKKILDWKNRLNIIKGIARGLLYLHRDSGLKIIHRDLKLSNILLDDQLNPKILDFGLARIFESNEDESNTQRVVGTYGYMPPEYAMEGLFSEKSDVFSFGVLLFEIISGRKNISLCDHEHSLNLLELAWKLWNEDGIKSLIDVEICDPVYIRDIVRCIHIGFLCVQEHARDRPSMATVNSMLNNHIANLPPSCQPAFYIQRKFVPSAKLSHKSNKSYSVNSITFTNIQGRSNLFLQRAVSSGGTTIAWLPLLTHDMRVFLEIMGISSLRNLLPVFLVISGFCADFCPASDTITTTQFVRDSEIVSSNNSEFELGFFSPENATNRYVGIWYVSDSNVIWVANRNQPLKDSSGILTISEDKNLVVLNGDKEVVWTSNISNKASNSTAQLLNTGNLVLLDDTGRTLWESFQHPGNSFLPNLVISTNQKTGEKLKVTSWKSPSDPSVGSFSSGLERPSTPEVFVWNQTQPYWRSGPWNGQVFIGLSKMYTSSYLNGFDVGREENGSVHITYSLPNESFFGTIVLSSEGKLVLTTWMNKLKVGMRTVQDSICDMYGLCGTFGSCDPRNSPICSCLRGFEPRNAEEWNRRNWTSGCVRRASLRCGKVKNGRDTDKDDGFLKLPMTKVPDFAEKSYGSEEMCRIQCLNNCNCTAYAYDAAIGCMSWNGNLIDVVRFSRGGVDLYIREAYSELEREKKVLKVVIIVTVAVGVIIIVAAYIVWWWAARHFARRKGNNGALTLEIEESHLKNHRANLIEDLKIAKLEELPLFDFGIIATATNNFSFANKLGRGGFGTVYKGELRDGQEIAVKRLSRASGQGLEEFMNEVVVISKLQHRNLVRLLGCCIEGEEKMLIYEYMPNKSLDAFVFDPIKKKALDWKKRLNIIEGISRGVLYLHRDSRLKIIHRDLKPSNILLDGELNPKISDFGMARIFQNNEDEGNTRRVVGTYGYMSPEYAMEGLFSEKSDVFSFGVLLLEIISGTKVTSFYVYEHSLSLLGFAWKSWNEEDIISFIDPEISAADFINEVRRCMHIGLLCVQELARDRPSMATVMSMLNSDIVNLPPPCHPAFNKRHGVSSSESSQQSNKSCSLNSVTLTNMQGR 1604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2408 1604 FunFam Liguleless narrow1 1362 1565 - -
Prci11g2408 1604 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 797 919 - -
Prci11g2408 1604 CDD B_lectin 42 158 IPR001480 -
Prci11g2408 1604 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 32 155 - -
Prci11g2408 1604 CDD PAN_AP_plant 1108 1193 - -
Prci11g2408 1604 SMART blect_4 42 158 IPR001480 -
Prci11g2408 1604 SMART blect_4 807 922 IPR001480 -
Prci11g2408 1604 Gene3D - 797 921 IPR036426 -
Prci11g2408 1604 Gene3D - 34 156 IPR036426 -
Prci11g2408 1604 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 390 498 - -
Prci11g2408 1604 Gene3D Phosphorylase Kinase; domain 1 1261 1361 - -
Prci11g2408 1604 ProSiteProfiles Bulb-type lectin domain profile. 801 920 IPR001480 -
Prci11g2408 1604 Pfam S-locus glycoprotein domain 201 237 IPR000858 GO:0048544
Prci11g2408 1604 Pfam S-locus glycoprotein domain 980 1088 IPR000858 GO:0048544
Prci11g2408 1604 Pfam PAN-like domain 1120 1178 IPR003609 -
Prci11g2408 1604 Pfam PAN-like domain 263 319 IPR003609 -
Prci11g2408 1604 CDD STKc_IRAK 1292 1558 - -
Prci11g2408 1604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1407 1419 IPR008271 GO:0004672|GO:0006468
Prci11g2408 1604 SMART serkin_6 1286 1562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2408 1604 SMART serkin_6 423 663 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2408 1604 Pfam D-mannose binding lectin 848 948 IPR001480 -
Prci11g2408 1604 Pfam D-mannose binding lectin 84 179 IPR001480 -
Prci11g2408 1604 ProSitePatterns Protein kinases ATP-binding region signature. 1292 1314 IPR017441 GO:0005524
Prci11g2408 1604 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 787 1548 - -
Prci11g2408 1604 ProSiteProfiles Protein kinase domain profile. 1286 1572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2408 1604 ProSiteProfiles Bulb-type lectin domain profile. 36 156 IPR001480 -
Prci11g2408 1604 SUPERFAMILY alpha-D-mannose-specific plant lectins 75 166 IPR036426 -
Prci11g2408 1604 MobiDBLite consensus disorder prediction 1576 1604 - -
Prci11g2408 1604 CDD STKc_IRAK 429 696 - -
Prci11g2408 1604 SMART ntp_6 1120 1192 IPR003609 -
Prci11g2408 1604 SMART ntp_6 262 335 IPR003609 -
Prci11g2408 1604 MobiDBLite consensus disorder prediction 1574 1604 - -
Prci11g2408 1604 Gene3D Phosphorylase Kinase; domain 1 384 498 - -
Prci11g2408 1604 SUPERFAMILY alpha-D-mannose-specific plant lectins 838 953 IPR036426 -
Prci11g2408 1604 ProSiteProfiles PAN/Apple domain profile. 1110 1193 IPR003609 -
Prci11g2408 1604 CDD B_lectin 807 922 IPR001480 -
Prci11g2408 1604 Pfam Protein tyrosine and serine/threonine kinase 425 638 IPR001245 GO:0004672|GO:0006468
Prci11g2408 1604 Pfam Protein tyrosine and serine/threonine kinase 1287 1557 IPR001245 GO:0004672|GO:0006468
Prci11g2408 1604 SUPERFAMILY Protein kinase-like (PK-like) 409 719 IPR011009 -
Prci11g2408 1604 ProSiteProfiles Protein kinase domain profile. 423 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2408 1604 ProSitePatterns Serine/Threonine protein kinases active-site signature. 544 556 IPR008271 GO:0004672|GO:0006468
Prci11g2408 1604 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 499 702 - -
Prci11g2408 1604 SUPERFAMILY Protein kinase-like (PK-like) 1271 1576 IPR011009 -
Prci11g2408 1604 ProSitePatterns Protein kinases ATP-binding region signature. 429 451 IPR017441 GO:0005524
Prci11g2408 1604 Gene3D Transferase(Phosphotransferase) domain 1 1362 1563 - -
Prci11g2408 1604 Gene3D Transferase(Phosphotransferase) domain 1 499 702 - -
Prci11g2408 1604 ProSiteProfiles PAN/Apple domain profile. 258 336 IPR003609 -
Prci11g2408 1604 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 1250 1361 - -
Prci11g2408 1604 CDD PAN_AP_plant 256 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2408 Prci-Chr11 26940179 26952241 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2408 338 712 Receptor kinase-like Gene Family AT4G05200 48.533 2.64e-104 348
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2408 PK_Tyr_Ser-Thr 5.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2408 - - pcin:129284814 1734.92