Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2403 ATGGCACCACCTGTGTTGATCCAAGAACCTGAAACAGTGAGCTCAAATAATGGCATGTTCACGCTGGGATTCTTCAGACCTCGGAATTCCACAAATCGCTACTTAGGAATTTGGTTTATGTCTGAATCCTCTGTTGTTTGGGTTGCTAACAAAAACGACCCACTAACAGATTCTTCTAGGAATATTCTCACAATGTCAGAGAATGGCAATCTTCTTGTTTTGAATGGGCAAAAACAAGTTGTTTGGTCAACAAATGTCTCAATGGCATCAAATTCTAATGCTCAACTCTTAGATTCTGGCAACCTTGTCCTCATTGATAGAACTACTGGAGCATTCTTGTGGCAGAGTTTCCAGCATCCTGATAATACATTATTGCCAGACATGAAACTGAGTACTAAAAAAACAGGCAAGAAAATGCAACTTACATCATGGAAAAGTACATCTGATCCATCCTATGGAGGATTCTCTTGCAGCCTTGAACTTCATAATGTTACCGAAGTGTTTGTGTGGAAAGAAAATCATCCTTACTGGCGTAGTGGTCCCTGGAATGGCACGCACTTTCTTGGGGTGTCTCAGAGTTCATCTATGTCCCTAAATGAGCTTCAGATGAAAGGAGAGGGAGGGAGTTTCGACCTGTATTTTCATTACTCAGACAAGTCTACTTTGCTAACTCTTAAGTTAGGTCATAAAGGTAAACTAAAGAAACAACGTTGGAATTCCCAGAAAAATACATGGGAACGTGAATGGGTAAGTGAGAATTCCGACTGTGATATTTATGGCAAATGTGGCAGATTTGGGATCTGCAATTCTTTAAGCTCACCAATCTGCAGCTGCTTGAGAGGGTTTGAACCAAAGAACAAAGAAGAATGGCGAAGGCAGAACTGGACTAGTGGGTGCGTGAGAAGGGAAGCACTTCAGTGTGATGGAGACAAAAATAGTTCTCAAGATAGCAAACCAGATGGATTTTTGAAGCTGGAGAGGGTAAAACTACCAGATCATGCAGAAGTTTTTTCTTCTAACTTTGATCAGCATATTGCAGATTGCCAAACTCAATGCCTGAAGCATTGCTCTTGTATAGCTTATGCCTATGACAGAAGCCTTGGTTGTATGGTTTGGAATGTAGATTTACTTGATACACAGAACTTCCCAGTTGGTGGGTTTGATCTTTACATACGTTTGGTCTACTCAGAACTAGATACAGGTAAGGCCAAGAGGAAAATGACAATATCTATTATAATATCAGCTCTGGTAGGAACCATTCTCATTATGGCCTGTGGATACTTCTTATGGAAAAAAAAGTCAAACCAAAAAGGGGAAACGCAGATGCAGATGCAGATTTCAAACCTGAAGCAACTTCATAATCAAGACCTATCATTGTTTGATTTTAGAAAGTTGGCAACTGCAACAAACAACTTTGACTTAGCAAACAAACTTGGGCAGGGAGGTTTTGGTCCAGTTTATAAGGGAAAGTTTGAAGATGGACAAGAAATAGCAGTAAAAAGACTTTCAAGATCATCTGGGCAGGGTATTGAAGAATTTATCAACGAAGTGGAGTTAATTTCAAAGCTTCAGCACCGAAACCTTGTTAGACTTCTTGGTTGTTGCATCGAAGGAGATGAAGAGATATTAGTTTATGAATACATGCCAAACAAAAGTTTGGATGCATATATTTTTGATCCACTGCAACAAAAATCTGTAGATTGGGGAAGACGCTTCAACATAATTGAAGGAATAGCTAGAGGATTACTCTATCTTCATAGAGATTCAAGATTGAGAATTATACATAGAGATTTGAAGGCCAGTAACATATTATTGGATGAAGGGATGAATCCAAAAATATCAGATTTTGGGATGGCTAAACTTTTTGGAGGTGGTCAAGATCAAGCAAATACAGAAAGAATTGTTGGAACCTATGGATACATTTCTCCAGAATATGCAACTGAAGGACTCTATTCAGAGAAATCTGATGTCTTTAGTTTTGGTGTTTTGCTGCTAGAGATTATTAGCGGAAGAAAAAATACTAGCTTTTATGAGGATGCAGAATCTTTCACACTTTTAGGCTTTGCGTGGAAATTATGGATCAATGCCAATGTTATACCTCTGATAGATCCACAAATATATGATCCAAGCTTTCACGATGATATATTGAGATGCACACATATTGGTCTTCTATGTGTGCAAGAACTTGCAAAAAATAGGCCCATTATGGCCTCGGTAGTGTCAATGCTTCAAAGTGAGCTTATAGATATTCCTCCCCCAAGCCAACCTGCATTCATCCTCAGGCAAACTATGTCTCCTGCAACAGAGCAAACTCCAAGCAATAATGAATTAAGTTCCATCAATGAAGTAACTATCTCAAATTTTGCTGGCAGATAA 2376 0.3893 MAPPVLIQEPETVSSNNGMFTLGFFRPRNSTNRYLGIWFMSESSVVWVANKNDPLTDSSRNILTMSENGNLLVLNGQKQVVWSTNVSMASNSNAQLLDSGNLVLIDRTTGAFLWQSFQHPDNTLLPDMKLSTNXKTGKKMQLTSWKSTSDPSYGGFSCSLELHNVTEVFVWKENHPYWRSGPWNGTHFLGVSQSSSMSLNELQMKGEGGSFDLYFHYSDKSTLLTLKLGHKGKLKKQRWNSQKNTWEREWVSENSDCDIYGKCGRFGICNSLSSPICSCLRGFEPKNKEEWRRQNWTSGCVRREALQCDGDKNSSQDSKPDGFLKLERVKLPDHAEVFSSNFDQHIADCQTQCLKHCSCIAYAYDRSLGCMVWNVDLLDTQNFPVGGFDLYIRLVYSELDTGKAKRKMTISIIISALVGTILIMACGYFLWKKKSNQKGETQMQMQISNLKQLHNQDLSLFDFRKLATATNNFDLANKLGQGGFGPVYKGKFEDGQEIAVKRLSRSSGQGIEEFINEVELISKLQHRNLVRLLGCCIEGDEEILVYEYMPNKSLDAYIFDPLQQKSVDWGRRFNIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEGMNPKISDFGMAKLFGGGQDQANTERIVGTYGYISPEYATEGLYSEKSDVFSFGVLLLEIISGRKNTSFYEDAESFTLLGFAWKLWINANVIPLIDPQIYDPSFHDDILRCTHIGLLCVQELAKNRPIMASVVSMLQSELIDIPPPSQPAFILRQTMSPATEQTPSNNELSSINEVTISNFAGR 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2403 792 Pfam Protein tyrosine and serine/threonine kinase 475 691 IPR001245 GO:0004672|GO:0006468
Prci11g2403 792 CDD STKc_IRAK 479 745 - -
Prci11g2403 792 Gene3D - 2 118 IPR036426 -
Prci11g2403 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 549 752 - -
Prci11g2403 792 Pfam D-mannose binding lectin 45 146 IPR001480 -
Prci11g2403 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 4 117 - -
Prci11g2403 792 SUPERFAMILY Protein kinase-like (PK-like) 458 774 IPR011009 -
Prci11g2403 792 PIRSF SRK 3 792 IPR024171 GO:0004674
Prci11g2403 792 ProSiteProfiles PAN/Apple domain profile. 308 395 IPR003609 -
Prci11g2403 792 Gene3D Transferase(Phosphotransferase) domain 1 549 750 - -
Prci11g2403 792 ProSiteProfiles Bulb-type lectin domain profile. 1 117 IPR001480 -
Prci11g2403 792 Pfam S-locus glycoprotein domain 178 287 IPR000858 GO:0048544
Prci11g2403 792 Gene3D Phosphorylase Kinase; domain 1 432 548 - -
Prci11g2403 792 CDD B_lectin 11 120 IPR001480 -
Prci11g2403 792 SUPERFAMILY alpha-D-mannose-specific plant lectins 35 151 IPR036426 -
Prci11g2403 792 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 9 735 - -
Prci11g2403 792 Pfam PAN-like domain 318 380 IPR003609 -
Prci11g2403 792 ProSiteProfiles Protein kinase domain profile. 473 749 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2403 792 ProSitePatterns Serine/Threonine protein kinases active-site signature. 594 606 IPR008271 GO:0004672|GO:0006468
Prci11g2403 792 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 436 548 - -
Prci11g2403 792 CDD PAN_AP_plant 306 394 - -
Prci11g2403 792 SMART blect_4 4 120 IPR001480 -
Prci11g2403 792 SMART serkin_6 473 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2403 792 SMART ntp_6 318 394 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2403 Prci-Chr11 26866362 26871087 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2403 408 759 Receptor kinase-like Gene Family AT4G23230 53.933 6.88e-129 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2403 PK_Tyr_Ser-Thr 6.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2403 - - pcin:129286407 981.089