Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2402 ATGGGGTTGTATGGAATTGATTGCTTGTTACTTGCCTTTATTTTGTTCTCTCTTATTGTTCTGGCCAGTGCCTTGGACACCATCACATCATCTTCGTTGATCCAAGAGCCTCAAACAATAAGCTCAAATAATAGCAGGTTCACCCTAGGATTCTTCAGTCCTCAAAATTCCACCAATCGCTACTTAGGAATTTGGTTTATGTCTGAGTCGCATACTGTTTGGGAAGCTAATAGAAACAACCCACTAATGGATTCTTCTGGGATTCTCACAATATCAGAGAATGGAAATCTCGTTGTCATCAATGGACAAAAACATGTTCTCTGGTCAACAAATGTCTCACATGTTGCATCAAATTCCAGTGCTCAACTCTTAGATTCCGGCAACCTTGTCCTCGCAGATGGAATTACTGGAGCATTCGTGTGGCAGAGTTTCCAGCATCCTTGTAATGCATTACTGCAAGACATGAAACTGAGTATCAACAAGAAAACAGGCGAGAAAGTGAAACTTATATCATGGAAAACTTTATCTGATGCAGCCTATGGAGGATTTTCTTGCAGTCTTGAACCTCGTGCTAATGTCACTGAACTATTCGTATGGAAAGGAAATCATCCTTATTGGCGCAGTGGTCCTTGGAATGGTACAAAATTTCTCGGGGTATCTCAGAATTCATCTGTATCCTTGAATGAGTTCAAGATGAAAGGTGATGAGGAAGGCAATTTTGACTTGTATTTTCATTACTCAGACAACTCAGTATTACTAACTCTTAGGTTAAGTTATCAAGGTAAAATAAGAATACAACGTTGGAATTCCCAGTCATATATATGGGAAATTGAATGGCTAAACGTGAATTCCGATTGTGATATTTATGGCCATTGTGGCCCATTTGGGATCTGCAATCCTTCGAGCTCGCCGATATGCAGCTGCTTGGGAGGGTTTGAACCCAAGAACAAAGAAGAATGGGGAAGACAGAACTGGACCAGCGGGTGTGTGAGAAGAGAAACACTTCAGTGTGAGAAAGACAAAAATGGTTCTCAAGCTAGCAAAATAGATGAGTTTATTAAGCTAGAGAGGGTAAAACTGCCTGATCGTGCACAAGTGTTACCTTTTGATGACTTTAAGGATAGTAATGGAGATTGTCAAACTCAGTGCCTGAAGAATTGCTCTTGTTTAGCTTATGCCTATGATAGAAGCCTTGGCTGTATGGTTTGGAATGCAGATTTACTTGACATACAAAACTTCTCAGCTGGAGGGGTTGATTTTTACATGCGTTTAGCCCACTTAGAGCAAGGTATAGGCAAGAGGAAAATGACAACACCTATCATCATATCAACTCTAATTGGAACAATTCTCATTACTTCCTTTGGGTATTTTTTGTGGAAAAAATGGTCAAAGCAAAAAGGGGAAATGCATATGCAAATTCAAAACAAGAGAAGGATGATGCAAGTCAAAATTCAAGAGCTACCATTAATTGGTTTTAGAAAGTTAGCAATTGCAACAAACAACTTTGACTTGGCAAATAAACTTGGGCAGGGTGGTTTTGGTCCAGTTTACAAGGGAATGTTAAGAGATGGAAAAGAAATAGCAGTGAAAAGACTATCAAGATTATCTGGGCAAGGTATGGAAGAATTTATGAATGAAGTAGAATTGATTTCTAAGCTTCAACATCGAAACCTTGTTAGACTTCTTGGCTGTTGCATAGAAGGAGATGAGGAGATATTGGTTTATGAATATATGCCAAACAAAAGTTTGGATGCATATATATTTGATCCATTGCAACAAAAATCTTTAGATTGGGGAAAGCGCTTCAATATAATTGAAGGAATAGCTAGAGGATTGCTCTATCTTCATAGAGATTCAAGATTAAGAATCATACATAGAGATTTGAAGGCAAGTAACATATTATTGGATGAACAGATGAATCCAAAAATATCAGATTTTGGGATAGCTAAACTTTTTGAAGGTGGTAAAGATCAAGCAAACACAACAAGAATTGTTGGTACATAG 2004 0.3822 MGLYGIDCLLLAFILFSLIVLASALDTITSSSLIQEPQTISSNNSRFTLGFFSPQNSTNRYLGIWFMSESHTVWEANRNNPLMDSSGILTISENGNLVVINGQKHVLWSTNVSHVASNSSAQLLDSGNLVLADGITGAFVWQSFQHPCNALLQDMKLSINKKTGEKVKLISWKTLSDAAYGGFSCSLEPRANVTELFVWKGNHPYWRSGPWNGTKFLGVSQNSSVSLNEFKMKGDEEGNFDLYFHYSDNSVLLTLRLSYQGKIRIQRWNSQSYIWEIEWLNVNSDCDIYGHCGPFGICNPSSSPICSCLGGFEPKNKEEWGRQNWTSGCVRRETLQCEKDKNGSQASKIDEFIKLERVKLPDRAQVLPFDDFKDSNGDCQTQCLKNCSCLAYAYDRSLGCMVWNADLLDIQNFSAGGVDFYMRLAHLEQGIGKRKMTTPIIISTLIGTILITSFGYFLWKKWSKQKGEMHMQIQNKRRMMQVKIQELPLIGFRKLAIATNNFDLANKLGQGGFGPVYKGMLRDGKEIAVKRLSRLSGQGMEEFMNEVELISKLQHRNLVRLLGCCIEGDEEILVYEYMPNKSLDAYIFDPLQQKSLDWGKRFNIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEQMNPKISDFGIAKLFEGGKDQANTTRIVGT 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2402 667 Pfam D-mannose binding lectin 72 173 IPR001480 -
Prci11g2402 667 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 657 - -
Prci11g2402 667 Pfam PAN-like domain 347 410 IPR003609 -
Prci11g2402 667 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 144 - -
Prci11g2402 667 Pfam Protein kinase domain 504 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2402 667 Gene3D - 20 145 IPR036426 -
Prci11g2402 667 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 213 IPR036426 -
Prci11g2402 667 CDD B_lectin 38 147 IPR001480 -
Prci11g2402 667 Pfam S-locus glycoprotein domain 206 316 IPR000858 GO:0048544
Prci11g2402 667 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Prci11g2402 667 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 578 667 - -
Prci11g2402 667 SMART blect_4 31 147 IPR001480 -
Prci11g2402 667 ProSiteProfiles Protein kinase domain profile. 502 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2402 667 CDD PAN_AP_plant 334 425 - -
Prci11g2402 667 SMART ntp_6 347 424 IPR003609 -
Prci11g2402 667 ProSiteProfiles PAN/Apple domain profile. 337 425 IPR003609 -
Prci11g2402 667 Gene3D Transferase(Phosphotransferase) domain 1 578 667 - -
Prci11g2402 667 ProSiteProfiles Bulb-type lectin domain profile. 25 144 IPR001480 -
Prci11g2402 667 SMART serkin_6 502 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2402 667 Gene3D Phosphorylase Kinase; domain 1 462 577 - -
Prci11g2402 667 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 465 577 - -
Prci11g2402 667 SUPERFAMILY Protein kinase-like (PK-like) 484 667 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2402 Prci-Chr11 26844934 26848584 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2402 440 667 Receptor kinase-like Gene Family AT4G23190 51.948 1.56e-74 249
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2402 Pkinase 4.1e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2402 - - qsa:O6P43_012540 778.474