Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci11g2400 ATGGGGTTGTATGGAATTGATTGCTTGTTACTTGCCTTTATTTTGTTCTCTCTTATTGTTCTGGCCAGTGCCTTGGACACCATCACATCATCTTCGTTGATCCAAGAGCCTCAAACAATAAGCTCAAATAATAGCAGGTTCACCCTAGGATTCTTCAGTCCTCAAAATTCCACCAATCGCTACTTAGGAATTTGGTTTATGTCTGAGTCGCATACTGTTTGGGAAGCTAATAGAAACAACCCACTAATGGATTCTTCTGGGATTCTCACAATATCAGAGAATGGAAATCTCGTTGTCATCAATGGACAAAAACATGTTCTCTGGTCAACAAATGTCTCACATGTTGCATCAAATTCCAGTGCTCAACTCTTAGATTCCGGCAACCTTGTCCTCGCAGATGGAATTACTGGAGCATTCGTGTGGCAGAGTTTCCAGCATCCTTGTAATGCATTACTGCAAGACATGAAACTGAGTATCAACAAGAAAACAGGCGAGAAAGTGAAACTTATATCATGGAAAACTTTATCTGATGCAGCCTATGGAGGATTTTCTTGCAGTCTTGAACCTCGTGCTAATGTCACTGAACTATTCGTATGGAAAGGAAATCATCCTTATTGGCGCAGTGGTCCTTGGAATGGTACAAAATTTCTCGGGGTATCTCAGAATTCATCTGTATCCTTGAATGAGTTCAAGATGAAAGGTGATGAGGAAGGCAATTTTGACTTGTATTTTCATTACTCAGACAACTCAGTATTACTAACTCTTAGGTTAAGTTATCAAGGTAAAATAAGAATACAACGTTGGAATTCCCAGTCATATATATGGGAAATTGAATGGCTAAACGTGAATTCCGATTGTGATATTTATGGCCATTGTGGCCCATTTGGGATCTGCAATCCTTCGAGCTCGCCGATATGCAGCTGCTTGGGAGGGTTTGAACCCAAGAACAAAGAAGAATGGGGAAGACAGAACTGGACCAGCGGGTGTGTGAGAAGAGAAACACTTCAGTGTGAGAAAGACAAAAATGGTTCTCAAGCTAGCAAAATAGATGAGTTTATTAAGCTAGAGAGGGTAAAACTGCCTGATCGTGCACAAGTGTTACCTTTTGATGACTTTAAGGATAGTAATGGAGATTGTCAAACTCAGTGCCTGAAGAATTGCTCTTGTTTAGCTTATGCCTATGATAGAAGCCTTGGCTGTATGGTTTGGAATGCAGATTTACTTGACATACAAAACTTCTCAGCTGGAGGGGTTGATTTTTACATGCGTTTAGCCCACTTAGAGCAAGGGGAAATGCATATGCAAATTCAAAACAAGAGAAGGATGATGCAAGTCAAAATTCAAGAGCTACCATTAATTGGTTTTAGAAAGTTAGCAATTGCAACAAACAACTTTGACTTGGCAAATAAACTTGGGCAGGGTGGTTTTGGTCCAGTTTACAAGGGAATGTTAAGAGATGGAAAAGAAATAGCAGTGAAAAGACTATCAAGATTATCTGGGCAAGGTATGGAAGAATTTATGAATGAAGTAGAATTGATTTCTAAGCTTCAACATCGAAACCTTGTTAGACTTCTTGGCTGTTGCATAGAAGGAGATGAGGAGATATTGGTTTATGAATATATGCCAAACAAAAGTTTGGATGCATATATATTTGATCCATTGCAACAAAAATCTTTAGATTGGGGAAAGCGCTTCAATATAATTGAAGGAATAGCTAGAGGATTGCTCTATCTTCATAGAGATTCAAGATTAAGAATCATACATAGAGATTTGAAGGCAAGTAACATATTATTGGATGAACAGATGAATCCAAAAATATCAGATTTTGGGATAGCTAAACTTTTTGAAGGTGGTAAAGATCAAGCAAACACAACAAGAATTGTTGGTACATATGGCTATATTTCTCCAGAATATGCAACTGAAGGACTTTATTCAGAGAAATCTGATGTCTTTAGCTTTGGTGTTTTGTTGCTAGAGATTATTAGTGGCAGAAAAAACACAAGCTTTTATGAAGATATAGAATCCTTGACACTTTTAGGATTTGCGTGGAAATTATGGATTGATGCCAATATTGTCCCTCTAATAGATCCACATATATATGATCCAATCTTTCATAAGGACATATTGAGGTACGTGCAAATAGGTCTTCTATGTGTGCAAGAACTTGCAAAAGAGAGGCCTACTATGGCCATCGTTTTATCGATGCTTCAAAGTGAGATTATTGATATTCCTTCTCCAAGCCAGCCTGCATTCATTCTCAGGCAGACCTTGTCTCATACTTCAAAGCAAGTTTCAAAAACTGGTGACTCATGTTCCATCAACAATGTAACTATCTCAAAATTTGTAGGGAGATAG 2355 0.3817 MGLYGIDCLLLAFILFSLIVLASALDTITSSSLIQEPQTISSNNSRFTLGFFSPQNSTNRYLGIWFMSESHTVWEANRNNPLMDSSGILTISENGNLVVINGQKHVLWSTNVSHVASNSSAQLLDSGNLVLADGITGAFVWQSFQHPCNALLQDMKLSINKKTGEKVKLISWKTLSDAAYGGFSCSLEPRANVTELFVWKGNHPYWRSGPWNGTKFLGVSQNSSVSLNEFKMKGDEEGNFDLYFHYSDNSVLLTLRLSYQGKIRIQRWNSQSYIWEIEWLNVNSDCDIYGHCGPFGICNPSSSPICSCLGGFEPKNKEEWGRQNWTSGCVRRETLQCEKDKNGSQASKIDEFIKLERVKLPDRAQVLPFDDFKDSNGDCQTQCLKNCSCLAYAYDRSLGCMVWNADLLDIQNFSAGGVDFYMRLAHLEQGEMHMQIQNKRRMMQVKIQELPLIGFRKLAIATNNFDLANKLGQGGFGPVYKGMLRDGKEIAVKRLSRLSGQGMEEFMNEVELISKLQHRNLVRLLGCCIEGDEEILVYEYMPNKSLDAYIFDPLQQKSLDWGKRFNIIEGIARGLLYLHRDSRLRIIHRDLKASNILLDEQMNPKISDFGIAKLFEGGKDQANTTRIVGTYGYISPEYATEGLYSEKSDVFSFGVLLLEIISGRKNTSFYEDIESLTLLGFAWKLWIDANIVPLIDPHIYDPIFHKDILRYVQIGLLCVQELAKERPTMAIVLSMLQSEIIDIPSPSQPAFILRQTLSHTSKQVSKTGDSCSINNVTISKFVGR 784
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci11g2400 784 Gene3D Phosphorylase Kinase; domain 1 426 540 - -
Prci11g2400 784 Pfam D-mannose binding lectin 72 173 IPR001480 -
Prci11g2400 784 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 429 540 - -
Prci11g2400 784 SMART serkin_6 465 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2400 784 CDD B_lectin 38 147 IPR001480 -
Prci11g2400 784 Gene3D Transferase(Phosphotransferase) domain 1 541 743 - -
Prci11g2400 784 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 13 727 - -
Prci11g2400 784 ProSitePatterns Serine/Threonine protein kinases active-site signature. 586 598 IPR008271 GO:0004672|GO:0006468
Prci11g2400 784 SMART blect_4 31 147 IPR001480 -
Prci11g2400 784 ProSiteProfiles Protein kinase domain profile. 465 741 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2400 784 CDD STKc_IRAK 471 737 - -
Prci11g2400 784 CDD PAN_AP_plant 334 425 - -
Prci11g2400 784 SMART ntp_6 347 424 IPR003609 -
Prci11g2400 784 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 21 144 - -
Prci11g2400 784 PIRSF SRK 3 448 IPR024171 GO:0004674
Prci11g2400 784 PIRSF SRK 427 784 IPR024171 GO:0004674
Prci11g2400 784 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 541 744 - -
Prci11g2400 784 Gene3D - 20 146 IPR036426 -
Prci11g2400 784 ProSiteProfiles PAN/Apple domain profile. 337 425 IPR003609 -
Prci11g2400 784 Pfam PAN-like domain 347 410 IPR003609 -
Prci11g2400 784 Pfam Protein kinase domain 467 665 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci11g2400 784 ProSiteProfiles Bulb-type lectin domain profile. 25 144 IPR001480 -
Prci11g2400 784 SUPERFAMILY Protein kinase-like (PK-like) 447 736 IPR011009 -
Prci11g2400 784 SUPERFAMILY alpha-D-mannose-specific plant lectins 62 213 IPR036426 -
Prci11g2400 784 Pfam S-locus glycoprotein domain 206 316 IPR000858 GO:0048544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci11g2400 Prci-Chr11 26844590 26848583 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci11g2400 453 751 Receptor kinase-like Gene Family AT4G23230 57.860 1.43e-117 367
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Prci11g2400 Pkinase 8.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci11g2400 - - pcin:129286407 957.207